Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01085

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
1,189,324	+		CCNA_01084	0.36	-2.1
1,189,332	-		CCNA_01084	0.37	+1.3
1,189,332	-		CCNA_01084	0.37	+1.8
1,189,495	-		CCNA_01084	0.50	-1.7
1,189,527	-		CCNA_01084	0.53	-1.3
1,189,534	+		CCNA_01084	0.53	-0.3
1,189,534	+		CCNA_01084	0.53	+1.0
1,189,534	+		CCNA_01084	0.53	-2.3
1,189,534	+		CCNA_01084	0.53	+0.5
1,189,542	-		CCNA_01084	0.54	-0.5
1,189,542	-		CCNA_01084	0.54	+0.8
1,189,542	-		CCNA_01084	0.54	-1.2
1,189,596	-		CCNA_01084	0.58	-1.8
1,189,692	+		CCNA_01084	0.66	+1.0
1,189,736	-		CCNA_01084	0.70	-0.6
1,189,807	-		CCNA_01084	0.76	-0.9
1,189,813	+		CCNA_01084	0.76	+0.5
1,189,816	-		CCNA_01084	0.76	-2.1
1,189,821	-		CCNA_01084	0.77	-0.2
1,189,862	-		CCNA_01084	0.80	-0.2
1,189,863	+		CCNA_01084	0.80	+0.9
1,189,863	+		CCNA_01084	0.80	-1.6
1,189,871	-		CCNA_01084	0.81	+1.0
1,190,025	+				+1.2
1,190,035	+				+0.1
1,190,122	+				+2.1
1,190,173	-				-0.2
1,190,225	-		CCNA_01085	0.12	-1.4
1,190,238	+		CCNA_01085	0.13	-2.1
1,190,278	+		CCNA_01085	0.17	-1.1
1,190,325	-		CCNA_01085	0.22	-1.9
1,190,325	-		CCNA_01085	0.22	-1.4
1,190,367	-		CCNA_01085	0.26	-3.0
1,190,374	+		CCNA_01085	0.27	-0.5
1,190,382	-		CCNA_01085	0.27	-2.0
1,190,420	+		CCNA_01085	0.31	-0.9
1,190,435	+		CCNA_01085	0.33	-0.5
1,190,494	-		CCNA_01085	0.39	-1.0
1,190,519	+		CCNA_01085	0.41	-1.1
1,190,542	-		CCNA_01085	0.43	-0.9
1,190,580	-		CCNA_01085	0.47	+0.6
1,190,636	-		CCNA_01085	0.53	+0.7
1,190,636	-		CCNA_01085	0.53	-0.4
1,190,646	-		CCNA_01085	0.54	-1.0
1,190,737	-		CCNA_01085	0.63	+0.4
1,190,780	+		CCNA_01085	0.67	-1.0
1,190,831	-		CCNA_01085	0.72	+0.1
1,190,831	-		CCNA_01085	0.72	-0.1
1,190,831	-		CCNA_01085	0.72	-0.3
1,190,958	+		CCNA_01085	0.85	+0.7
1,190,966	-		CCNA_01085	0.85	-2.5
1,191,012	-				+2.3
1,191,082	-				-2.8
1,191,092	+				-0.7
1,191,096	+				+1.7
1,191,138	-				+1.5
1,191,139	-				-3.1
1,191,200	+				+1.0
1,191,218	-				+2.1
1,191,218	-				+0.9
1,191,256	+				+1.7
1,191,256	+				-1.5
1,191,267	+				-0.6
1,191,289	+				-1.5
1,191,328	-				+0.1
1,191,340	-				-1.2
1,191,340	-				+0.7
1,191,359	-				-0.9
1,191,443	-				-2.4
1,191,456	+				-0.8
1,191,457	-				-2.5
1,191,475	-				-3.0
1,191,514	+		CCNA_01086	0.12	-1.2
1,191,557	-		CCNA_01086	0.14	-1.8
1,191,615	-		CCNA_01086	0.17	-1.9
1,191,709	-		CCNA_01086	0.22	+0.3
1,191,744	+		CCNA_01086	0.24	+1.3
1,191,789	-		CCNA_01086	0.27	-2.2
1,191,836	-		CCNA_01086	0.29	-2.3
1,191,846	-		CCNA_01086	0.30	-3.4
1,191,870	-		CCNA_01086	0.31	-1.0
1,191,896	-		CCNA_01086	0.33	-2.4
1,191,916	+		CCNA_01086	0.34	-2.6
1,191,936	+		CCNA_01086	0.35	-0.0
1,192,094	+		CCNA_01086	0.44	-2.7
1,192,102	-		CCNA_01086	0.44	-1.9
1,192,102	-		CCNA_01086	0.44	-3.0
1,192,102	-		CCNA_01086	0.44	-1.9