Experiment: NAG (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS09150 and BPHYT_RS09155 are separated by 182 nucleotides BPHYT_RS09155 and BPHYT_RS09160 are separated by 131 nucleotides
BPHYT_RS09150: BPHYT_RS09150 - acetyl-CoA acetyltransferase, at 2,071,153 to 2,072,334
_RS09150
BPHYT_RS09155: BPHYT_RS09155 - 3-ketoacyl-ACP reductase, at 2,072,517 to 2,073,257
_RS09155
BPHYT_RS09160: BPHYT_RS09160 - polyhydroxyalkanoate synthesis repressor PhaR, at 2,073,389 to 2,074,018
_RS09160
Position (kb)
2072
2073
2074 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2071.606 kb on + strand, within BPHYT_RS09150 at 2071.615 kb on + strand, within BPHYT_RS09150 at 2071.987 kb on + strand, within BPHYT_RS09150 at 2071.987 kb on + strand, within BPHYT_RS09150 at 2071.987 kb on + strand, within BPHYT_RS09150 at 2072.289 kb on + strand at 2072.290 kb on - strand at 2072.290 kb on - strand at 2072.511 kb on + strand at 2072.512 kb on - strand at 2072.535 kb on + strand at 2072.535 kb on + strand at 2072.598 kb on + strand, within BPHYT_RS09155 at 2072.789 kb on + strand, within BPHYT_RS09155 at 2072.973 kb on + strand, within BPHYT_RS09155 at 2072.973 kb on + strand, within BPHYT_RS09155 at 2072.973 kb on + strand, within BPHYT_RS09155 at 2073.069 kb on + strand, within BPHYT_RS09155 at 2073.248 kb on + strand at 2073.367 kb on - strand at 2073.386 kb on + strand at 2073.397 kb on + strand at 2073.397 kb on + strand at 2073.398 kb on - strand at 2073.474 kb on - strand, within BPHYT_RS09160 at 2073.474 kb on - strand, within BPHYT_RS09160 at 2073.474 kb on - strand, within BPHYT_RS09160 at 2073.650 kb on + strand, within BPHYT_RS09160 at 2073.684 kb on - strand, within BPHYT_RS09160 at 2073.752 kb on + strand, within BPHYT_RS09160 at 2073.836 kb on + strand, within BPHYT_RS09160 at 2073.836 kb on + strand, within BPHYT_RS09160 at 2073.837 kb on - strand, within BPHYT_RS09160 at 2073.837 kb on - strand, within BPHYT_RS09160 at 2074.016 kb on + strand at 2074.149 kb on + strand at 2074.149 kb on + strand at 2074.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (N) remove 2,071,606 + BPHYT_RS09150 0.38 +0.2 2,071,615 + BPHYT_RS09150 0.39 -0.5 2,071,987 + BPHYT_RS09150 0.71 -0.8 2,071,987 + BPHYT_RS09150 0.71 +0.4 2,071,987 + BPHYT_RS09150 0.71 -0.2 2,072,289 + -0.8 2,072,290 - +0.3 2,072,290 - -1.0 2,072,511 + -1.3 2,072,512 - -0.6 2,072,535 + +0.5 2,072,535 + -2.0 2,072,598 + BPHYT_RS09155 0.11 -1.0 2,072,789 + BPHYT_RS09155 0.37 -1.0 2,072,973 + BPHYT_RS09155 0.62 -2.0 2,072,973 + BPHYT_RS09155 0.62 -1.5 2,072,973 + BPHYT_RS09155 0.62 -3.0 2,073,069 + BPHYT_RS09155 0.74 -1.8 2,073,248 + -2.6 2,073,367 - -0.3 2,073,386 + -0.6 2,073,397 + -1.3 2,073,397 + +0.0 2,073,398 - +0.3 2,073,474 - BPHYT_RS09160 0.13 -0.6 2,073,474 - BPHYT_RS09160 0.13 -0.0 2,073,474 - BPHYT_RS09160 0.13 -0.1 2,073,650 + BPHYT_RS09160 0.41 +0.2 2,073,684 - BPHYT_RS09160 0.47 -0.2 2,073,752 + BPHYT_RS09160 0.58 -0.7 2,073,836 + BPHYT_RS09160 0.71 -1.0 2,073,836 + BPHYT_RS09160 0.71 -1.2 2,073,837 - BPHYT_RS09160 0.71 -1.2 2,073,837 - BPHYT_RS09160 0.71 +0.1 2,074,016 + +0.7 2,074,149 + -0.0 2,074,149 + -0.4 2,074,150 - -2.0
Or see this region's nucleotide sequence