Experiment: Nickel (II) chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2740 and Ac3H11_2741 are separated by 287 nucleotides Ac3H11_2741 and Ac3H11_2742 are separated by 19 nucleotides Ac3H11_2742 and Ac3H11_2743 overlap by 4 nucleotides
Ac3H11_2740 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 1,039,225 to 1,040,109
_2740
Ac3H11_2741 - 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), at 1,040,397 to 1,041,302
_2741
Ac3H11_2742 - Fumarylacetoacetate hydrolase family protein, at 1,041,322 to 1,042,167
_2742
Ac3H11_2743 - 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45), at 1,042,164 to 1,043,252
_2743
Position (kb)
1040
1041
1042 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1040.179 kb on + strand at 1040.200 kb on - strand at 1040.280 kb on + strand at 1040.459 kb on - strand at 1040.511 kb on + strand, within Ac3H11_2741 at 1040.512 kb on - strand, within Ac3H11_2741 at 1041.084 kb on - strand, within Ac3H11_2741 at 1041.294 kb on - strand at 1041.304 kb on + strand at 1041.304 kb on + strand at 1041.304 kb on + strand at 1041.304 kb on + strand at 1041.304 kb on + strand at 1041.304 kb on + strand at 1041.305 kb on - strand at 1041.323 kb on + strand at 1041.731 kb on + strand, within Ac3H11_2742 at 1041.936 kb on - strand, within Ac3H11_2742 at 1041.936 kb on - strand, within Ac3H11_2742
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.8 mM remove 1,040,179 + -0.9 1,040,200 - -0.5 1,040,280 + +0.7 1,040,459 - -0.7 1,040,511 + Ac3H11_2741 0.13 +0.1 1,040,512 - Ac3H11_2741 0.13 -0.8 1,041,084 - Ac3H11_2741 0.76 -0.9 1,041,294 - +0.3 1,041,304 + -0.0 1,041,304 + -0.5 1,041,304 + -0.8 1,041,304 + +0.9 1,041,304 + -1.0 1,041,304 + -0.8 1,041,305 - -2.0 1,041,323 + -0.6 1,041,731 + Ac3H11_2742 0.48 +1.9 1,041,936 - Ac3H11_2742 0.73 -0.1 1,041,936 - Ac3H11_2742 0.73 -0.0
Or see this region's nucleotide sequence