Experiment: Nickel (II) chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2320 and Ac3H11_2321 are separated by 92 nucleotides Ac3H11_2321 and Ac3H11_2322 overlap by 4 nucleotides
Ac3H11_2320 - Transcriptional regulator, XRE family, at 571,200 to 572,693
_2320
Ac3H11_2321 - Acyl-CoA hydrolase (EC 3.1.2.20), at 572,786 to 573,181
_2321
Ac3H11_2322 - 2-methylcitrate synthase (EC 2.3.3.5), at 573,178 to 574,335
_2322
Position (kb) 572
573
574 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 571.810 kb on + strand, within Ac3H11_2320 at 571.837 kb on + strand, within Ac3H11_2320 at 571.837 kb on + strand, within Ac3H11_2320 at 571.838 kb on - strand, within Ac3H11_2320 at 571.838 kb on - strand, within Ac3H11_2320 at 572.212 kb on + strand, within Ac3H11_2320 at 572.213 kb on - strand, within Ac3H11_2320 at 572.213 kb on - strand, within Ac3H11_2320 at 572.560 kb on + strand at 572.561 kb on - strand at 573.158 kb on + strand at 573.183 kb on + strand at 573.183 kb on + strand at 573.183 kb on + strand at 573.183 kb on + strand at 573.184 kb on - strand at 573.184 kb on - strand at 573.184 kb on - strand at 573.184 kb on - strand at 573.305 kb on - strand, within Ac3H11_2322 at 573.400 kb on + strand, within Ac3H11_2322 at 573.400 kb on + strand, within Ac3H11_2322 at 573.400 kb on + strand, within Ac3H11_2322 at 573.400 kb on + strand, within Ac3H11_2322 at 573.400 kb on + strand, within Ac3H11_2322 at 573.401 kb on - strand, within Ac3H11_2322 at 573.610 kb on + strand, within Ac3H11_2322 at 573.611 kb on - strand, within Ac3H11_2322 at 573.611 kb on - strand, within Ac3H11_2322 at 573.611 kb on - strand, within Ac3H11_2322 at 573.611 kb on - strand, within Ac3H11_2322 at 573.616 kb on + strand, within Ac3H11_2322 at 573.616 kb on + strand, within Ac3H11_2322 at 573.616 kb on + strand, within Ac3H11_2322 at 573.617 kb on - strand, within Ac3H11_2322 at 573.650 kb on + strand, within Ac3H11_2322 at 573.650 kb on + strand, within Ac3H11_2322 at 573.651 kb on - strand, within Ac3H11_2322 at 573.651 kb on - strand, within Ac3H11_2322 at 573.754 kb on + strand, within Ac3H11_2322 at 573.755 kb on - strand, within Ac3H11_2322 at 573.755 kb on - strand, within Ac3H11_2322 at 573.755 kb on - strand, within Ac3H11_2322 at 573.823 kb on + strand, within Ac3H11_2322 at 573.823 kb on + strand, within Ac3H11_2322 at 573.823 kb on + strand, within Ac3H11_2322 at 573.823 kb on + strand, within Ac3H11_2322 at 573.823 kb on + strand, within Ac3H11_2322 at 573.824 kb on - strand, within Ac3H11_2322 at 573.824 kb on - strand, within Ac3H11_2322 at 573.824 kb on - strand, within Ac3H11_2322 at 573.824 kb on - strand, within Ac3H11_2322 at 573.824 kb on - strand, within Ac3H11_2322 at 573.824 kb on - strand, within Ac3H11_2322 at 573.824 kb on - strand, within Ac3H11_2322 at 573.824 kb on - strand, within Ac3H11_2322 at 573.910 kb on + strand, within Ac3H11_2322 at 573.974 kb on + strand, within Ac3H11_2322 at 573.974 kb on + strand, within Ac3H11_2322 at 573.974 kb on + strand, within Ac3H11_2322 at 573.974 kb on + strand, within Ac3H11_2322 at 573.975 kb on - strand, within Ac3H11_2322 at 573.975 kb on - strand, within Ac3H11_2322 at 573.975 kb on - strand, within Ac3H11_2322 at 573.994 kb on + strand, within Ac3H11_2322 at 573.995 kb on - strand, within Ac3H11_2322 at 574.160 kb on - strand, within Ac3H11_2322 at 574.160 kb on - strand, within Ac3H11_2322
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.8 mM remove 571,810 + Ac3H11_2320 0.41 -0.8 571,837 + Ac3H11_2320 0.43 -1.2 571,837 + Ac3H11_2320 0.43 +1.1 571,838 - Ac3H11_2320 0.43 -2.3 571,838 - Ac3H11_2320 0.43 -2.2 572,212 + Ac3H11_2320 0.68 -2.9 572,213 - Ac3H11_2320 0.68 -2.5 572,213 - Ac3H11_2320 0.68 -0.5 572,560 + -3.1 572,561 - -0.3 573,158 + +0.2 573,183 + -0.8 573,183 + -1.0 573,183 + -1.1 573,183 + -0.7 573,184 - -1.1 573,184 - -0.1 573,184 - -0.9 573,184 - -0.4 573,305 - Ac3H11_2322 0.11 -2.0 573,400 + Ac3H11_2322 0.19 -1.0 573,400 + Ac3H11_2322 0.19 -0.9 573,400 + Ac3H11_2322 0.19 -1.3 573,400 + Ac3H11_2322 0.19 -0.5 573,400 + Ac3H11_2322 0.19 +0.2 573,401 - Ac3H11_2322 0.19 -0.8 573,610 + Ac3H11_2322 0.37 +0.5 573,611 - Ac3H11_2322 0.37 +0.1 573,611 - Ac3H11_2322 0.37 -1.4 573,611 - Ac3H11_2322 0.37 -1.0 573,611 - Ac3H11_2322 0.37 -1.7 573,616 + Ac3H11_2322 0.38 -1.0 573,616 + Ac3H11_2322 0.38 -0.1 573,616 + Ac3H11_2322 0.38 -0.7 573,617 - Ac3H11_2322 0.38 +1.3 573,650 + Ac3H11_2322 0.41 -0.9 573,650 + Ac3H11_2322 0.41 -1.1 573,651 - Ac3H11_2322 0.41 -1.0 573,651 - Ac3H11_2322 0.41 -0.9 573,754 + Ac3H11_2322 0.50 -0.9 573,755 - Ac3H11_2322 0.50 -0.1 573,755 - Ac3H11_2322 0.50 +0.3 573,755 - Ac3H11_2322 0.50 -0.7 573,823 + Ac3H11_2322 0.56 -0.3 573,823 + Ac3H11_2322 0.56 -0.5 573,823 + Ac3H11_2322 0.56 -1.2 573,823 + Ac3H11_2322 0.56 -1.0 573,823 + Ac3H11_2322 0.56 -0.6 573,824 - Ac3H11_2322 0.56 -0.5 573,824 - Ac3H11_2322 0.56 -0.4 573,824 - Ac3H11_2322 0.56 -1.7 573,824 - Ac3H11_2322 0.56 -1.0 573,824 - Ac3H11_2322 0.56 -1.0 573,824 - Ac3H11_2322 0.56 -0.6 573,824 - Ac3H11_2322 0.56 -0.2 573,824 - Ac3H11_2322 0.56 -1.4 573,910 + Ac3H11_2322 0.63 -0.9 573,974 + Ac3H11_2322 0.69 -0.1 573,974 + Ac3H11_2322 0.69 -0.8 573,974 + Ac3H11_2322 0.69 -0.5 573,974 + Ac3H11_2322 0.69 +0.1 573,975 - Ac3H11_2322 0.69 -0.9 573,975 - Ac3H11_2322 0.69 -0.8 573,975 - Ac3H11_2322 0.69 -0.7 573,994 + Ac3H11_2322 0.70 -0.3 573,995 - Ac3H11_2322 0.71 -0.6 574,160 - Ac3H11_2322 0.85 +0.1 574,160 - Ac3H11_2322 0.85 -0.8
Or see this region's nucleotide sequence