Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17750 and AZOBR_RS17755 are separated by 239 nucleotides AZOBR_RS17755 and AZOBR_RS17760 are separated by 50 nucleotides
AZOBR_RS17750: AZOBR_RS17750 - hypothetical protein, at 745,763 to 746,794
_RS17750
AZOBR_RS17755: AZOBR_RS17755 - hypothetical protein, at 747,034 to 747,624
_RS17755
AZOBR_RS17760: AZOBR_RS17760 - hypothetical protein, at 747,675 to 748,382
_RS17760
Position (kb) 747
748
749 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 746.710 kb on + strand at 746.711 kb on - strand at 746.992 kb on - strand at 747.055 kb on + strand at 747.055 kb on + strand at 747.055 kb on + strand at 747.055 kb on + strand at 747.055 kb on + strand at 747.055 kb on + strand at 747.055 kb on + strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.056 kb on - strand at 747.117 kb on + strand, within AZOBR_RS17755 at 747.118 kb on - strand, within AZOBR_RS17755 at 747.479 kb on - strand, within AZOBR_RS17755 at 747.493 kb on + strand, within AZOBR_RS17755 at 747.493 kb on + strand, within AZOBR_RS17755 at 747.494 kb on - strand, within AZOBR_RS17755 at 747.595 kb on + strand at 747.595 kb on + strand at 747.596 kb on - strand at 747.622 kb on + strand at 747.622 kb on + strand at 747.623 kb on - strand at 747.745 kb on + strand at 747.746 kb on - strand, within AZOBR_RS17760 at 747.746 kb on - strand, within AZOBR_RS17760 at 747.748 kb on + strand, within AZOBR_RS17760 at 747.748 kb on + strand, within AZOBR_RS17760 at 747.749 kb on - strand, within AZOBR_RS17760 at 747.766 kb on + strand, within AZOBR_RS17760 at 747.766 kb on + strand, within AZOBR_RS17760 at 747.766 kb on + strand, within AZOBR_RS17760 at 747.766 kb on + strand, within AZOBR_RS17760 at 747.766 kb on + strand, within AZOBR_RS17760 at 747.766 kb on + strand, within AZOBR_RS17760 at 747.766 kb on + strand, within AZOBR_RS17760 at 747.767 kb on - strand, within AZOBR_RS17760 at 747.767 kb on - strand, within AZOBR_RS17760 at 747.767 kb on - strand, within AZOBR_RS17760 at 747.767 kb on - strand, within AZOBR_RS17760 at 747.767 kb on - strand, within AZOBR_RS17760 at 747.767 kb on - strand, within AZOBR_RS17760 at 747.767 kb on - strand, within AZOBR_RS17760 at 747.767 kb on - strand, within AZOBR_RS17760 at 747.796 kb on + strand, within AZOBR_RS17760 at 747.796 kb on + strand, within AZOBR_RS17760 at 747.797 kb on - strand, within AZOBR_RS17760 at 747.797 kb on - strand, within AZOBR_RS17760 at 747.797 kb on - strand, within AZOBR_RS17760 at 747.820 kb on + strand, within AZOBR_RS17760 at 747.821 kb on - strand, within AZOBR_RS17760 at 747.961 kb on + strand, within AZOBR_RS17760 at 747.961 kb on + strand, within AZOBR_RS17760 at 747.961 kb on + strand, within AZOBR_RS17760 at 747.962 kb on - strand, within AZOBR_RS17760 at 747.962 kb on - strand, within AZOBR_RS17760 at 747.962 kb on - strand, within AZOBR_RS17760 at 747.965 kb on + strand, within AZOBR_RS17760 at 747.965 kb on + strand, within AZOBR_RS17760 at 747.965 kb on + strand, within AZOBR_RS17760 at 747.966 kb on - strand, within AZOBR_RS17760 at 747.966 kb on - strand, within AZOBR_RS17760 at 747.966 kb on - strand, within AZOBR_RS17760 at 748.007 kb on - strand, within AZOBR_RS17760 at 748.101 kb on - strand, within AZOBR_RS17760 at 748.162 kb on + strand, within AZOBR_RS17760 at 748.162 kb on + strand, within AZOBR_RS17760 at 748.162 kb on + strand, within AZOBR_RS17760 at 748.162 kb on + strand, within AZOBR_RS17760 at 748.171 kb on + strand, within AZOBR_RS17760 at 748.171 kb on + strand, within AZOBR_RS17760 at 748.171 kb on + strand, within AZOBR_RS17760 at 748.171 kb on + strand, within AZOBR_RS17760 at 748.171 kb on + strand, within AZOBR_RS17760 at 748.171 kb on + strand, within AZOBR_RS17760 at 748.172 kb on - strand, within AZOBR_RS17760 at 748.172 kb on - strand, within AZOBR_RS17760 at 748.172 kb on - strand, within AZOBR_RS17760 at 748.203 kb on + strand, within AZOBR_RS17760 at 748.204 kb on - strand, within AZOBR_RS17760 at 748.204 kb on - strand, within AZOBR_RS17760 at 748.390 kb on + strand at 748.417 kb on + strand at 748.417 kb on + strand at 748.418 kb on - strand at 748.418 kb on - strand at 748.418 kb on - strand at 748.988 kb on - strand at 748.998 kb on + strand at 749.054 kb on - strand at 749.110 kb on + strand at 749.110 kb on + strand at 749.111 kb on - strand at 749.111 kb on - strand at 749.155 kb on + strand at 749.156 kb on - strand at 749.242 kb on - strand at 749.287 kb on + strand at 749.288 kb on - strand at 749.370 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 746,710 + -0.1 746,711 - -2.0 746,992 - -0.4 747,055 + +0.6 747,055 + -0.7 747,055 + +0.4 747,055 + +0.2 747,055 + +0.9 747,055 + +0.6 747,055 + -0.3 747,056 - +1.8 747,056 - -0.2 747,056 - +0.0 747,056 - -0.1 747,056 - -0.4 747,056 - +0.6 747,056 - -0.3 747,056 - -1.0 747,056 - -0.1 747,056 - -0.2 747,056 - +0.1 747,056 - +0.6 747,056 - -0.1 747,056 - +0.3 747,056 - -0.3 747,117 + AZOBR_RS17755 0.14 -0.3 747,118 - AZOBR_RS17755 0.14 -1.3 747,479 - AZOBR_RS17755 0.75 -0.4 747,493 + AZOBR_RS17755 0.78 -0.1 747,493 + AZOBR_RS17755 0.78 -0.3 747,494 - AZOBR_RS17755 0.78 +0.2 747,595 + -0.6 747,595 + -1.0 747,596 - -0.3 747,622 + +0.0 747,622 + +0.6 747,623 - -0.2 747,745 + -0.2 747,746 - AZOBR_RS17760 0.10 -0.7 747,746 - AZOBR_RS17760 0.10 -0.2 747,748 + AZOBR_RS17760 0.10 -0.2 747,748 + AZOBR_RS17760 0.10 -0.2 747,749 - AZOBR_RS17760 0.10 -0.1 747,766 + AZOBR_RS17760 0.13 -0.8 747,766 + AZOBR_RS17760 0.13 -0.5 747,766 + AZOBR_RS17760 0.13 -1.2 747,766 + AZOBR_RS17760 0.13 -0.2 747,766 + AZOBR_RS17760 0.13 +0.4 747,766 + AZOBR_RS17760 0.13 -0.3 747,766 + AZOBR_RS17760 0.13 -0.6 747,767 - AZOBR_RS17760 0.13 -1.5 747,767 - AZOBR_RS17760 0.13 -0.2 747,767 - AZOBR_RS17760 0.13 -0.5 747,767 - AZOBR_RS17760 0.13 -0.1 747,767 - AZOBR_RS17760 0.13 -0.8 747,767 - AZOBR_RS17760 0.13 -0.2 747,767 - AZOBR_RS17760 0.13 -0.5 747,767 - AZOBR_RS17760 0.13 -0.2 747,796 + AZOBR_RS17760 0.17 -1.1 747,796 + AZOBR_RS17760 0.17 +0.4 747,797 - AZOBR_RS17760 0.17 +0.8 747,797 - AZOBR_RS17760 0.17 -1.1 747,797 - AZOBR_RS17760 0.17 +0.2 747,820 + AZOBR_RS17760 0.20 +0.6 747,821 - AZOBR_RS17760 0.21 +0.2 747,961 + AZOBR_RS17760 0.40 -0.3 747,961 + AZOBR_RS17760 0.40 -0.4 747,961 + AZOBR_RS17760 0.40 -0.4 747,962 - AZOBR_RS17760 0.41 +2.3 747,962 - AZOBR_RS17760 0.41 +0.2 747,962 - AZOBR_RS17760 0.41 -0.4 747,965 + AZOBR_RS17760 0.41 +0.4 747,965 + AZOBR_RS17760 0.41 -0.6 747,965 + AZOBR_RS17760 0.41 +0.1 747,966 - AZOBR_RS17760 0.41 +0.3 747,966 - AZOBR_RS17760 0.41 -0.9 747,966 - AZOBR_RS17760 0.41 -0.3 748,007 - AZOBR_RS17760 0.47 +0.3 748,101 - AZOBR_RS17760 0.60 -0.0 748,162 + AZOBR_RS17760 0.69 -0.7 748,162 + AZOBR_RS17760 0.69 -0.3 748,162 + AZOBR_RS17760 0.69 +0.1 748,162 + AZOBR_RS17760 0.69 -0.2 748,171 + AZOBR_RS17760 0.70 -0.7 748,171 + AZOBR_RS17760 0.70 -0.1 748,171 + AZOBR_RS17760 0.70 -1.2 748,171 + AZOBR_RS17760 0.70 +0.1 748,171 + AZOBR_RS17760 0.70 -1.1 748,171 + AZOBR_RS17760 0.70 -0.7 748,172 - AZOBR_RS17760 0.70 -0.3 748,172 - AZOBR_RS17760 0.70 +0.5 748,172 - AZOBR_RS17760 0.70 +0.2 748,203 + AZOBR_RS17760 0.75 -0.1 748,204 - AZOBR_RS17760 0.75 -0.4 748,204 - AZOBR_RS17760 0.75 -1.0 748,390 + -3.0 748,417 + +0.3 748,417 + +0.5 748,418 - -0.1 748,418 - +0.4 748,418 - +0.2 748,988 - -0.3 748,998 + -0.8 749,054 - +0.1 749,110 + -3.0 749,110 + -0.9 749,111 - -0.4 749,111 - -1.1 749,155 + -0.5 749,156 - +0.8 749,242 - +0.6 749,287 + -1.1 749,288 - -0.4 749,370 + -2.4
Or see this region's nucleotide sequence