Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5319

Experiment: 5-Hydroxymethylfurfural 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 10 mM
6,114,435	+		Pf6N2E2_5318	0.55	-0.4
6,114,435	+		Pf6N2E2_5318	0.55	-1.7
6,114,435	+		Pf6N2E2_5318	0.55	-2.4
6,114,435	+		Pf6N2E2_5318	0.55	-1.6
6,114,435	+		Pf6N2E2_5318	0.55	-1.0
6,114,435	+		Pf6N2E2_5318	0.55	-1.2
6,114,436	-		Pf6N2E2_5318	0.55	-1.3
6,114,436	-		Pf6N2E2_5318	0.55	-0.9
6,114,520	+		Pf6N2E2_5318	0.59	-1.4
6,114,520	+		Pf6N2E2_5318	0.59	-1.0
6,114,521	-		Pf6N2E2_5318	0.59	-1.6
6,114,521	-		Pf6N2E2_5318	0.59	-1.8
6,114,521	-		Pf6N2E2_5318	0.59	-0.9
6,114,618	+		Pf6N2E2_5318	0.64	-2.0
6,114,618	+		Pf6N2E2_5318	0.64	-1.2
6,114,618	+		Pf6N2E2_5318	0.64	-0.6
6,114,619	-		Pf6N2E2_5318	0.64	+0.0
6,114,639	+		Pf6N2E2_5318	0.65	-0.5
6,114,639	+		Pf6N2E2_5318	0.65	-0.7
6,114,639	+		Pf6N2E2_5318	0.65	-3.2
6,114,639	+		Pf6N2E2_5318	0.65	-1.2
6,114,640	-		Pf6N2E2_5318	0.65	-0.6
6,114,640	-		Pf6N2E2_5318	0.65	-1.3
6,114,738	+		Pf6N2E2_5318	0.70	-2.0
6,114,738	+		Pf6N2E2_5318	0.70	-0.6
6,114,738	+		Pf6N2E2_5318	0.70	-1.7
6,114,738	+		Pf6N2E2_5318	0.70	-2.6
6,114,738	+		Pf6N2E2_5318	0.70	-2.8
6,114,738	+		Pf6N2E2_5318	0.70	-2.4
6,114,738	+		Pf6N2E2_5318	0.70	-1.2
6,114,738	+		Pf6N2E2_5318	0.70	-1.5
6,114,739	-		Pf6N2E2_5318	0.70	-1.3
6,114,739	-		Pf6N2E2_5318	0.70	-1.1
6,114,739	-		Pf6N2E2_5318	0.70	-1.2
6,114,739	-		Pf6N2E2_5318	0.70	-1.2
6,114,739	-		Pf6N2E2_5318	0.70	-0.6
6,114,739	-		Pf6N2E2_5318	0.70	-0.8
6,114,739	-		Pf6N2E2_5318	0.70	-1.2
6,114,739	-		Pf6N2E2_5318	0.70	-1.0
6,114,742	+		Pf6N2E2_5318	0.70	-0.4
6,114,742	+		Pf6N2E2_5318	0.70	-1.5
6,114,742	+		Pf6N2E2_5318	0.70	-1.1
6,114,742	+		Pf6N2E2_5318	0.70	-0.1
6,114,743	-		Pf6N2E2_5318	0.70	-1.6
6,114,743	-		Pf6N2E2_5318	0.70	-0.9
6,114,743	-		Pf6N2E2_5318	0.70	-2.1
6,114,810	+		Pf6N2E2_5318	0.73	-0.6
6,114,811	-		Pf6N2E2_5318	0.73	-1.1
6,114,849	-		Pf6N2E2_5318	0.75	-1.1
6,114,873	+		Pf6N2E2_5318	0.76	-2.2
6,114,873	+		Pf6N2E2_5318	0.76	-2.9
6,114,873	+		Pf6N2E2_5318	0.76	-2.5
6,114,873	+		Pf6N2E2_5318	0.76	-1.8
6,114,873	+		Pf6N2E2_5318	0.76	-1.7
6,114,873	+		Pf6N2E2_5318	0.76	-1.7
6,114,873	+		Pf6N2E2_5318	0.76	-0.4
6,114,873	+		Pf6N2E2_5318	0.76	-1.8
6,114,873	+		Pf6N2E2_5318	0.76	-1.7
6,114,873	+		Pf6N2E2_5318	0.76	-2.3
6,114,874	-		Pf6N2E2_5318	0.76	-1.5
6,114,874	-		Pf6N2E2_5318	0.76	-1.8
6,114,874	-		Pf6N2E2_5318	0.76	-0.8
6,114,978	+		Pf6N2E2_5318	0.81	-0.4
6,115,068	+		Pf6N2E2_5318	0.86	+0.3
6,115,068	+		Pf6N2E2_5318	0.86	-1.0
6,115,068	+		Pf6N2E2_5318	0.86	-1.6
6,115,068	+		Pf6N2E2_5318	0.86	-0.9
6,115,068	+		Pf6N2E2_5318	0.86	-3.4
6,115,069	-		Pf6N2E2_5318	0.86	-0.3
6,115,069	-		Pf6N2E2_5318	0.86	-0.3
6,115,069	-		Pf6N2E2_5318	0.86	-2.1
6,115,069	-		Pf6N2E2_5318	0.86	+0.3
6,115,069	-		Pf6N2E2_5318	0.86	-0.3
6,115,069	-		Pf6N2E2_5318	0.86	-1.0
6,115,200	+				-1.0
6,115,201	-				-1.9
6,115,236	+				-2.6
6,115,236	+				-1.9
6,115,237	-				-0.2
6,115,237	-				-0.8
6,115,353	+				-1.5
6,115,353	+				-1.0
6,115,353	+				-1.2
6,115,354	-				-1.7
6,115,369	+				-3.5
6,115,369	+				-2.7
6,115,370	-				-2.0
6,115,370	-				-2.6
6,115,464	+		Pf6N2E2_5319	0.17	-1.0
6,115,465	-		Pf6N2E2_5319	0.17	+0.1
6,115,509	+		Pf6N2E2_5319	0.24	-1.4
6,115,524	-		Pf6N2E2_5319	0.26	+0.2
6,115,572	+		Pf6N2E2_5319	0.34	+0.0
6,115,573	-		Pf6N2E2_5319	0.34	-1.8
6,115,576	+		Pf6N2E2_5319	0.35	+0.2
6,115,576	+		Pf6N2E2_5319	0.35	-3.1
6,115,576	+		Pf6N2E2_5319	0.35	-3.8
6,115,577	-		Pf6N2E2_5319	0.35	-1.4
6,115,577	-		Pf6N2E2_5319	0.35	-0.3
6,115,617	+		Pf6N2E2_5319	0.41	-1.7
6,115,617	+		Pf6N2E2_5319	0.41	-1.0
6,115,618	-		Pf6N2E2_5319	0.41	-1.1
6,115,854	+		Pf6N2E2_5319	0.79	-3.0
6,115,854	+		Pf6N2E2_5319	0.79	-1.3
6,115,854	+		Pf6N2E2_5319	0.79	-0.9
6,115,854	+		Pf6N2E2_5319	0.79	-3.2
6,115,854	+		Pf6N2E2_5319	0.79	-0.9
6,115,854	+		Pf6N2E2_5319	0.79	-0.5
6,115,854	+		Pf6N2E2_5319	0.79	-0.7
6,115,854	+		Pf6N2E2_5319	0.79	-2.4
6,115,855	-		Pf6N2E2_5319	0.79	-1.9
6,115,855	-		Pf6N2E2_5319	0.79	-0.0
6,115,855	-		Pf6N2E2_5319	0.79	-1.8
6,115,855	-		Pf6N2E2_5319	0.79	-2.3
6,115,855	-		Pf6N2E2_5319	0.79	-2.7
6,115,965	+				-1.0
6,115,965	+				-0.2
6,115,965	+				-0.7
6,115,966	-				-0.4
6,115,966	-				-3.1
6,115,983	+				-2.5
6,115,983	+				-2.3
6,115,983	+				-1.4
6,115,983	+				-1.0
6,115,984	-				-0.1
6,115,984	-				+0.2
6,115,984	-				-2.7
6,116,044	-		Pf6N2E2_5320	0.17	-0.0
6,116,103	+		Pf6N2E2_5320	0.35	-0.6
6,116,103	+		Pf6N2E2_5320	0.35	-2.2
6,116,104	-		Pf6N2E2_5320	0.35	-1.7
6,116,104	-		Pf6N2E2_5320	0.35	-2.4
6,116,164	+		Pf6N2E2_5320	0.53	-1.7
6,116,164	+		Pf6N2E2_5320	0.53	-1.2
6,116,164	+		Pf6N2E2_5320	0.53	-0.9
6,116,165	-		Pf6N2E2_5320	0.53	-0.7
6,116,181	+		Pf6N2E2_5320	0.58	-1.7
6,116,181	+		Pf6N2E2_5320	0.58	-2.0
6,116,181	+		Pf6N2E2_5320	0.58	-0.7
6,116,182	-		Pf6N2E2_5320	0.58	-2.3
6,116,182	-		Pf6N2E2_5320	0.58	-1.4
6,116,216	+		Pf6N2E2_5320	0.68	-2.3
6,116,216	+		Pf6N2E2_5320	0.68	-2.4
6,116,216	+		Pf6N2E2_5320	0.68	-1.3
6,116,216	+		Pf6N2E2_5320	0.68	-2.6
6,116,216	+		Pf6N2E2_5320	0.68	-1.1
6,116,216	+		Pf6N2E2_5320	0.68	-0.6
6,116,216	+		Pf6N2E2_5320	0.68	+0.3
6,116,217	-		Pf6N2E2_5320	0.69	-2.2
6,116,217	-		Pf6N2E2_5320	0.69	-1.1
6,116,217	-		Pf6N2E2_5320	0.69	-1.5
6,116,217	-		Pf6N2E2_5320	0.69	-1.3
6,116,217	-		Pf6N2E2_5320	0.69	-1.0
6,116,217	-		Pf6N2E2_5320	0.69	-1.2
6,116,636	+		Pf6N2E2_5321	0.34	-1.1
6,116,691	-		Pf6N2E2_5321	0.40	-1.4
6,116,691	-		Pf6N2E2_5321	0.40	-0.0
6,116,691	-		Pf6N2E2_5321	0.40	-1.6
6,116,703	-		Pf6N2E2_5321	0.42	-2.3
6,116,703	-		Pf6N2E2_5321	0.42	-2.4
6,116,711	+		Pf6N2E2_5321	0.43	-1.2
6,116,784	-		Pf6N2E2_5321	0.51	-1.1
6,116,864	+		Pf6N2E2_5321	0.60	-1.6
6,116,865	-		Pf6N2E2_5321	0.60	-0.3
6,116,865	-		Pf6N2E2_5321	0.60	-0.2
6,116,865	-		Pf6N2E2_5321	0.60	-1.3
6,116,966	+		Pf6N2E2_5321	0.71	-0.9
6,116,966	+		Pf6N2E2_5321	0.71	-1.9
6,116,967	-		Pf6N2E2_5321	0.71	-1.8
6,116,967	-		Pf6N2E2_5321	0.71	-1.8