Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5317

Experiment: 5-Hydroxymethylfurfural 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 10 mM
6,111,758	+				+0.0
6,111,758	+				-0.2
6,111,914	+				+0.2
6,111,928	+				+0.5
6,111,928	+				+0.2
6,111,928	+				+0.5
6,111,928	+				+0.1
6,111,928	+				+2.1
6,111,928	+				-1.9
6,111,928	+				+0.7
6,111,928	+				+0.5
6,111,928	+				+1.2
6,111,929	-				+0.3
6,111,929	-				-1.6
6,111,929	-				-1.2
6,111,929	-				-1.2
6,111,929	-				-0.5
6,111,929	-				-1.0
6,112,068	+				-0.4
6,112,068	+				-0.2
6,112,068	+				+1.1
6,112,201	+				+0.6
6,112,201	+				-0.0
6,112,201	+				+0.4
6,112,202	-				-2.5
6,112,202	-				-0.8
6,112,221	-				-0.9
6,112,221	-				-2.0
6,112,221	-				-0.9
6,112,281	+				+0.2
6,112,282	-				-3.7
6,112,282	-				+0.6
6,112,282	-				-0.4
6,112,361	+				+0.9
6,112,362	-				-1.7
6,112,379	+				-1.1
6,112,400	-				-0.7
6,112,402	+				-1.3
6,112,402	+				-1.1
6,112,402	+				-1.4
6,112,403	-				-1.0
6,112,403	-				-0.1
6,112,403	-				-1.3
6,112,403	-				-1.5
6,112,575	+		Pf6N2E2_5317	0.18	-0.1
6,112,589	+		Pf6N2E2_5317	0.20	+1.0
6,112,590	-		Pf6N2E2_5317	0.20	-1.6
6,112,590	-		Pf6N2E2_5317	0.20	-1.1
6,112,602	+		Pf6N2E2_5317	0.21	-0.8
6,112,602	+		Pf6N2E2_5317	0.21	-3.0
6,112,602	+		Pf6N2E2_5317	0.21	-1.5
6,112,602	+		Pf6N2E2_5317	0.21	-1.8
6,112,603	-		Pf6N2E2_5317	0.21	-1.7
6,112,603	-		Pf6N2E2_5317	0.21	-1.2
6,112,603	-		Pf6N2E2_5317	0.21	-0.7
6,112,683	+		Pf6N2E2_5317	0.30	-2.5
6,112,684	-		Pf6N2E2_5317	0.30	-0.0
6,112,684	-		Pf6N2E2_5317	0.30	-0.7
6,112,684	-		Pf6N2E2_5317	0.30	-2.2
6,112,692	+		Pf6N2E2_5317	0.31	-1.1
6,112,692	+		Pf6N2E2_5317	0.31	-0.9
6,112,692	+		Pf6N2E2_5317	0.31	-1.1
6,112,692	+		Pf6N2E2_5317	0.31	-1.0
6,112,692	+		Pf6N2E2_5317	0.31	-0.4
6,112,693	-		Pf6N2E2_5317	0.31	-0.6
6,112,693	-		Pf6N2E2_5317	0.31	+0.2
6,112,693	-		Pf6N2E2_5317	0.31	-2.0
6,112,920	+		Pf6N2E2_5317	0.56	-1.7
6,112,920	+		Pf6N2E2_5317	0.56	-0.9
6,112,920	+		Pf6N2E2_5317	0.56	-3.0
6,112,920	+		Pf6N2E2_5317	0.56	-2.1
6,112,921	-		Pf6N2E2_5317	0.56	-1.7
6,112,921	-		Pf6N2E2_5317	0.56	-2.0
6,112,921	-		Pf6N2E2_5317	0.56	-2.0
6,112,986	-		Pf6N2E2_5317	0.63	-1.9
6,112,998	+		Pf6N2E2_5317	0.65	-0.9
6,112,998	+		Pf6N2E2_5317	0.65	-0.6
6,112,998	+		Pf6N2E2_5317	0.65	-0.6
6,112,999	-		Pf6N2E2_5317	0.65	-1.2
6,112,999	-		Pf6N2E2_5317	0.65	-1.3
6,112,999	-		Pf6N2E2_5317	0.65	-0.9
6,113,093	+		Pf6N2E2_5317	0.75	-1.1
6,113,093	+		Pf6N2E2_5317	0.75	-1.4
6,113,093	+		Pf6N2E2_5317	0.75	-1.2
6,113,093	+		Pf6N2E2_5317	0.75	-1.6
6,113,094	-		Pf6N2E2_5317	0.75	-2.3
6,113,094	-		Pf6N2E2_5317	0.75	-2.2
6,113,115	+		Pf6N2E2_5317	0.77	-2.0
6,113,116	-		Pf6N2E2_5317	0.77	-1.3
6,113,116	-		Pf6N2E2_5317	0.77	-1.5
6,113,116	-		Pf6N2E2_5317	0.77	-0.8
6,113,116	-		Pf6N2E2_5317	0.77	-0.9
6,113,160	+		Pf6N2E2_5317	0.82	-1.3
6,113,161	-		Pf6N2E2_5317	0.82	-0.7
6,113,161	-		Pf6N2E2_5317	0.82	-2.3
6,113,161	-		Pf6N2E2_5317	0.82	-0.4
6,113,205	+		Pf6N2E2_5317	0.87	-1.1
6,113,205	+		Pf6N2E2_5317	0.87	-2.0
6,113,205	+		Pf6N2E2_5317	0.87	-2.2
6,113,205	+		Pf6N2E2_5317	0.87	-2.6
6,113,205	+		Pf6N2E2_5317	0.87	-1.1
6,113,205	+		Pf6N2E2_5317	0.87	-0.8
6,113,205	+		Pf6N2E2_5317	0.87	-3.2
6,113,205	+		Pf6N2E2_5317	0.87	-0.3
6,113,205	+		Pf6N2E2_5317	0.87	-1.3
6,113,206	-		Pf6N2E2_5317	0.87	-2.3
6,113,206	-		Pf6N2E2_5317	0.87	-1.7
6,113,206	-		Pf6N2E2_5317	0.87	-1.6
6,113,206	-		Pf6N2E2_5317	0.87	-0.8
6,113,206	-		Pf6N2E2_5317	0.87	-0.8
6,113,206	-		Pf6N2E2_5317	0.87	-1.2
6,113,206	-		Pf6N2E2_5317	0.87	-0.1
6,113,206	-		Pf6N2E2_5317	0.87	+0.2
6,113,319	+				-0.8
6,113,320	-				-0.5
6,113,320	-				-0.8
6,113,334	-				-1.3
6,113,338	+				-1.5
6,113,338	+				-0.4
6,113,339	-				-1.1
6,113,433	+				-0.8
6,113,433	+				-1.3
6,113,434	-				-0.5
6,113,434	-				-1.7
6,113,434	-				-1.3
6,113,434	-				-0.3
6,113,434	-				-1.7
6,113,434	-				-1.1
6,113,451	+				-1.2
6,113,451	+				-1.6
6,113,451	+				-1.5
6,113,451	+				-1.0
6,113,452	-				-1.3
6,113,452	-				-1.0
6,113,505	+				+0.1
6,113,505	+				-2.0
6,113,505	+				-2.4
6,113,505	+				-0.7
6,113,505	+				-2.6
6,113,506	-				-2.1
6,113,506	-				-0.3
6,113,506	-				-2.1
6,113,564	+		Pf6N2E2_5318	0.12	-1.3
6,113,564	+		Pf6N2E2_5318	0.12	-1.0
6,113,619	+		Pf6N2E2_5318	0.14	-1.4
6,113,619	+		Pf6N2E2_5318	0.14	-0.9
6,113,619	+		Pf6N2E2_5318	0.14	-0.5
6,113,620	-		Pf6N2E2_5318	0.15	-1.9
6,113,620	-		Pf6N2E2_5318	0.15	-1.3
6,113,865	+		Pf6N2E2_5318	0.27	-0.6
6,113,866	-		Pf6N2E2_5318	0.27	-1.7
6,113,866	-		Pf6N2E2_5318	0.27	-2.2
6,113,866	-		Pf6N2E2_5318	0.27	-1.9
6,113,890	-		Pf6N2E2_5318	0.28	-2.4
6,113,892	+		Pf6N2E2_5318	0.28	-0.7
6,113,892	+		Pf6N2E2_5318	0.28	-0.7
6,113,892	+		Pf6N2E2_5318	0.28	-2.4
6,113,892	+		Pf6N2E2_5318	0.28	-2.1
6,113,892	+		Pf6N2E2_5318	0.28	-1.3
6,113,892	+		Pf6N2E2_5318	0.28	-1.0
6,113,892	+		Pf6N2E2_5318	0.28	-1.6
6,113,892	+		Pf6N2E2_5318	0.28	-3.2
6,113,892	+		Pf6N2E2_5318	0.28	-1.9
6,113,892	+		Pf6N2E2_5318	0.28	-1.6
6,113,893	-		Pf6N2E2_5318	0.28	-1.8
6,113,893	-		Pf6N2E2_5318	0.28	+0.0
6,113,893	-		Pf6N2E2_5318	0.28	-1.4
6,113,893	-		Pf6N2E2_5318	0.28	-2.8
6,113,893	-		Pf6N2E2_5318	0.28	-0.8
6,113,893	-		Pf6N2E2_5318	0.28	-1.8
6,113,906	-		Pf6N2E2_5318	0.29	-3.6
6,113,912	-		Pf6N2E2_5318	0.29	-2.9
6,113,924	+		Pf6N2E2_5318	0.29	-1.2
6,113,925	-		Pf6N2E2_5318	0.30	-1.4
6,114,097	-		Pf6N2E2_5318	0.38	-1.7
6,114,097	-		Pf6N2E2_5318	0.38	-0.9
6,114,147	+		Pf6N2E2_5318	0.40	-1.2
6,114,147	+		Pf6N2E2_5318	0.40	-1.0
6,114,147	+		Pf6N2E2_5318	0.40	-0.4
6,114,147	+		Pf6N2E2_5318	0.40	+0.2
6,114,147	+		Pf6N2E2_5318	0.40	-1.4
6,114,147	+		Pf6N2E2_5318	0.40	-2.7
6,114,147	+		Pf6N2E2_5318	0.40	-1.4
6,114,147	+		Pf6N2E2_5318	0.40	-3.3
6,114,147	+		Pf6N2E2_5318	0.40	-1.9
6,114,147	+		Pf6N2E2_5318	0.40	+0.2
6,114,147	+		Pf6N2E2_5318	0.40	-0.0
6,114,148	-		Pf6N2E2_5318	0.41	-0.7
6,114,148	-		Pf6N2E2_5318	0.41	-2.5
6,114,148	-		Pf6N2E2_5318	0.41	-0.8
6,114,148	-		Pf6N2E2_5318	0.41	-2.3
6,114,148	-		Pf6N2E2_5318	0.41	-1.4
6,114,148	-		Pf6N2E2_5318	0.41	-1.8
6,114,148	-		Pf6N2E2_5318	0.41	+0.4
6,114,148	-		Pf6N2E2_5318	0.41	-1.6
6,114,148	-		Pf6N2E2_5318	0.41	-1.1
6,114,148	-		Pf6N2E2_5318	0.41	-1.4
6,114,148	-		Pf6N2E2_5318	0.41	-0.4
6,114,148	-		Pf6N2E2_5318	0.41	-1.9
6,114,186	+		Pf6N2E2_5318	0.42	-0.8
6,114,186	+		Pf6N2E2_5318	0.42	-1.1
6,114,186	+		Pf6N2E2_5318	0.42	-1.1
6,114,186	+		Pf6N2E2_5318	0.42	-1.2
6,114,186	+		Pf6N2E2_5318	0.42	-2.7
6,114,186	+		Pf6N2E2_5318	0.42	-1.4
6,114,186	+		Pf6N2E2_5318	0.42	-0.9
6,114,186	+		Pf6N2E2_5318	0.42	-1.4
6,114,187	-		Pf6N2E2_5318	0.42	-1.5
6,114,187	-		Pf6N2E2_5318	0.42	-1.7
6,114,187	-		Pf6N2E2_5318	0.42	-1.1
6,114,187	-		Pf6N2E2_5318	0.42	-1.8
6,114,187	-		Pf6N2E2_5318	0.42	-2.2
6,114,187	-		Pf6N2E2_5318	0.42	-1.0
6,114,187	-		Pf6N2E2_5318	0.42	-2.1
6,114,276	+		Pf6N2E2_5318	0.47	-1.1
6,114,276	+		Pf6N2E2_5318	0.47	-1.5
6,114,276	+		Pf6N2E2_5318	0.47	-1.4
6,114,276	+		Pf6N2E2_5318	0.47	-2.2
6,114,276	+		Pf6N2E2_5318	0.47	-1.5
6,114,276	+		Pf6N2E2_5318	0.47	-1.4
6,114,276	+		Pf6N2E2_5318	0.47	-1.1
6,114,276	+		Pf6N2E2_5318	0.47	-0.5
6,114,277	-		Pf6N2E2_5318	0.47	-1.2
6,114,277	-		Pf6N2E2_5318	0.47	-1.3
6,114,277	-		Pf6N2E2_5318	0.47	-0.6