Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4270

Experiment: 5-Hydroxymethylfurfural 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 10 mM
4,965,940	+				-0.7
4,965,940	+				+0.6
4,965,940	+				+1.4
4,965,940	+				+0.1
4,965,940	+				+0.6
4,965,940	+				-0.9
4,965,940	+				-0.8
4,965,940	+				+0.5
4,965,940	+				+0.7
4,965,941	-				+0.1
4,966,078	+				+0.8
4,966,079	-				+0.5
4,966,079	-				-0.6
4,966,079	-				+0.9
4,966,079	-				+0.5
4,966,109	+				-1.8
4,966,110	-				+0.1
4,966,110	-				-0.8
4,966,110	-				-0.1
4,966,110	-				+0.5
4,966,110	-				-0.6
4,966,261	+		Pf6N2E2_4269	0.29	-0.3
4,966,380	+		Pf6N2E2_4269	0.55	+0.2
4,966,380	+		Pf6N2E2_4269	0.55	+0.0
4,966,380	+		Pf6N2E2_4269	0.55	+0.4
4,966,380	+		Pf6N2E2_4269	0.55	+0.3
4,966,380	+		Pf6N2E2_4269	0.55	-0.2
4,966,380	+		Pf6N2E2_4269	0.55	+0.1
4,966,380	+		Pf6N2E2_4269	0.55	+0.1
4,966,381	-		Pf6N2E2_4269	0.55	+0.5
4,966,381	-		Pf6N2E2_4269	0.55	+0.3
4,966,467	+		Pf6N2E2_4269	0.74	+0.3
4,966,467	+		Pf6N2E2_4269	0.74	+0.3
4,966,479	+		Pf6N2E2_4269	0.77	+0.4
4,966,497	+		Pf6N2E2_4269	0.81	+0.3
4,966,498	-		Pf6N2E2_4269	0.81	+0.9
4,966,498	-		Pf6N2E2_4269	0.81	-0.4
4,966,498	-		Pf6N2E2_4269	0.81	-0.0
4,966,498	-		Pf6N2E2_4269	0.81	+0.7
4,966,515	+		Pf6N2E2_4269	0.85	-0.0
4,966,516	-		Pf6N2E2_4269	0.85	+0.2
4,966,516	-		Pf6N2E2_4269	0.85	-1.0
4,966,617	+				-0.3
4,966,617	+				+1.7
4,966,617	+				+0.5
4,966,617	+				+0.7
4,966,617	+				+1.0
4,966,618	-				+0.3
4,966,618	-				-0.2
4,966,618	-				-0.4
4,966,618	-				+0.2
4,966,697	-				-0.4
4,966,762	+				+0.6
4,966,762	+				-0.3
4,966,762	+				+0.1
4,966,763	-				-0.1
4,966,763	-				+0.4
4,966,763	-				-0.5
4,966,763	-				+0.0
4,966,763	-				+0.2
4,966,764	+				+0.6
4,966,764	+				+0.6
4,966,764	+				+0.5
4,966,764	+				+0.7
4,966,764	+				+0.9
4,966,764	+				+0.2
4,966,764	+				-0.3
4,966,764	+				-0.7
4,966,764	+				+0.8
4,966,764	+				+0.2
4,966,764	+				+0.5
4,966,765	-				-0.2
4,966,765	-				+0.2
4,966,765	-				+0.0
4,966,765	-				+0.6
4,966,765	-				-1.4
4,966,765	-				+0.3
4,966,765	-				+0.3
4,966,765	-				-0.1
4,966,765	-				-0.2
4,966,765	-				+0.4
4,966,765	-				-0.5
4,966,984	+				+0.8
4,966,985	-				-1.0
4,966,992	+				+0.5
4,967,024	+				+0.3
4,967,024	+				-0.2
4,967,042	+				+1.0
4,967,043	-				+1.1
4,967,202	+		Pf6N2E2_4270	0.18	+0.5
4,967,520	+		Pf6N2E2_4270	0.36	+0.2
4,967,521	-		Pf6N2E2_4270	0.36	+0.8
4,967,521	-		Pf6N2E2_4270	0.36	+0.9
4,967,610	+		Pf6N2E2_4270	0.41	-0.3
4,967,611	-		Pf6N2E2_4270	0.41	-1.6
4,967,611	-		Pf6N2E2_4270	0.41	+0.0
4,967,769	+		Pf6N2E2_4270	0.50	-0.5
4,967,769	+		Pf6N2E2_4270	0.50	+1.6
4,967,770	-		Pf6N2E2_4270	0.50	+0.7
4,968,012	+		Pf6N2E2_4270	0.64	+1.1
4,968,013	-		Pf6N2E2_4270	0.64	-0.0
4,968,093	+		Pf6N2E2_4270	0.68	-0.3
4,968,093	+		Pf6N2E2_4270	0.68	+0.8
4,968,093	+		Pf6N2E2_4270	0.68	-0.4
4,968,093	+		Pf6N2E2_4270	0.68	+1.7
4,968,094	-		Pf6N2E2_4270	0.68	-0.0
4,968,094	-		Pf6N2E2_4270	0.68	+0.6
4,968,094	-		Pf6N2E2_4270	0.68	-2.1
4,968,094	-		Pf6N2E2_4270	0.68	+0.1
4,968,094	-		Pf6N2E2_4270	0.68	+0.3
4,968,094	-		Pf6N2E2_4270	0.68	-0.9
4,968,094	-		Pf6N2E2_4270	0.68	-0.0
4,968,094	-		Pf6N2E2_4270	0.68	+0.4
4,968,632	+				+0.5
4,968,632	+				-0.0
4,968,632	+				+0.6
4,968,632	+				+0.2
4,968,632	+				+0.1
4,968,782	+		Pf6N2E2_4271	0.28	-0.4
4,968,782	+		Pf6N2E2_4271	0.28	-0.8
4,968,782	+		Pf6N2E2_4271	0.28	-0.2
4,968,782	+		Pf6N2E2_4271	0.28	-0.5
4,968,783	-		Pf6N2E2_4271	0.28	-0.6
4,968,783	-		Pf6N2E2_4271	0.28	+0.5
4,968,783	-		Pf6N2E2_4271	0.28	-0.2
4,968,785	+		Pf6N2E2_4271	0.29	-1.0
4,968,785	+		Pf6N2E2_4271	0.29	-0.0
4,968,785	+		Pf6N2E2_4271	0.29	+0.8
4,968,785	+		Pf6N2E2_4271	0.29	-0.9
4,968,785	+		Pf6N2E2_4271	0.29	-0.8
4,968,786	-		Pf6N2E2_4271	0.29	-0.4
4,968,786	-		Pf6N2E2_4271	0.29	-0.6
4,968,786	-		Pf6N2E2_4271	0.29	+0.3
4,968,786	-		Pf6N2E2_4271	0.29	-0.1
4,968,806	-		Pf6N2E2_4271	0.34	-0.2
4,968,866	+		Pf6N2E2_4271	0.49	+0.0
4,968,866	+		Pf6N2E2_4271	0.49	-0.5
4,968,866	+		Pf6N2E2_4271	0.49	+0.5
4,968,867	-		Pf6N2E2_4271	0.49	-2.9
4,968,867	-		Pf6N2E2_4271	0.49	-0.3
4,968,867	-		Pf6N2E2_4271	0.49	-1.1
4,968,914	+		Pf6N2E2_4271	0.61	-0.4
4,968,914	+		Pf6N2E2_4271	0.61	-0.3
4,968,915	-		Pf6N2E2_4271	0.61	-0.1
4,969,108	+				-0.0
4,969,108	+				-0.1
4,969,108	+				+0.2
4,969,109	-				-0.4
4,969,109	-				+0.4
4,969,109	-				+1.5
4,969,110	+				-0.1
4,969,110	+				+0.1
4,969,110	+				+0.3
4,969,111	-				+0.7
4,969,111	-				+0.3
4,969,111	-				+0.2
4,969,122	+				+0.0
4,969,122	+				+0.1
4,969,122	+				-0.3
4,969,123	-				+0.5
4,969,123	-				+0.2
4,969,124	+				-0.1
4,969,124	+				+0.2
4,969,124	+				-0.0
4,969,124	+				+0.1
4,969,124	+				-0.5
4,969,124	+				+0.5
4,969,124	+				+1.5
4,969,125	-				+0.7
4,969,125	-				+1.1
4,969,125	-				+0.4
4,969,125	-				+0.6
4,969,125	-				-0.1
4,969,125	-				-0.7
4,969,125	-				-0.4
4,969,129	+				+0.7
4,969,129	+				+1.3
4,969,129	+				+1.3
4,969,129	+				-0.5
4,969,129	+				+0.4
4,969,129	+				+1.4
4,969,130	-				+0.9
4,969,130	-				+0.4
4,969,130	-				-0.0
4,969,130	-				+0.1
4,969,130	-				+0.3
4,969,130	-				+0.7
4,969,130	-				+0.5
4,969,137	+				+0.2
4,969,138	-				+0.6
4,969,139	+				+0.4
4,969,139	+				-0.0
4,969,139	+				+0.4
4,969,139	+				+0.3
4,969,139	+				-0.7
4,969,139	+				+0.2
4,969,139	+				+0.5
4,969,139	+				+0.5
4,969,140	-				+0.4
4,969,140	-				+0.8
4,969,140	-				+0.2
4,969,140	-				+0.6
4,969,140	-				-0.6
4,969,140	-				-0.4
4,969,140	-				+0.4
4,969,140	-				+0.6
4,969,157	-				+0.9
4,969,188	-				+0.6
4,969,412	-		Pf6N2E2_4272	0.22	-0.3
4,969,412	-		Pf6N2E2_4272	0.22	+0.0
4,969,412	-		Pf6N2E2_4272	0.22	+0.4
4,969,412	-		Pf6N2E2_4272	0.22	-0.2
4,969,412	-		Pf6N2E2_4272	0.22	+0.5