Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2977

Experiment: 5-Hydroxymethylfurfural 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 10 mM
3,470,770	-		Pf6N2E2_2976	0.62	+0.1
3,470,773	-		Pf6N2E2_2976	0.63	+0.2
3,470,773	-		Pf6N2E2_2976	0.63	-0.4
3,470,874	+		Pf6N2E2_2976	0.71	+1.1
3,470,907	+		Pf6N2E2_2976	0.73	+0.9
3,470,907	+		Pf6N2E2_2976	0.73	+0.3
3,470,907	+		Pf6N2E2_2976	0.73	+1.0
3,470,907	+		Pf6N2E2_2976	0.73	-0.5
3,470,907	+		Pf6N2E2_2976	0.73	-0.6
3,470,907	+		Pf6N2E2_2976	0.73	+0.6
3,470,907	+		Pf6N2E2_2976	0.73	-0.3
3,470,907	+		Pf6N2E2_2976	0.73	+0.4
3,470,907	+		Pf6N2E2_2976	0.73	-0.5
3,470,908	-		Pf6N2E2_2976	0.73	+0.4
3,470,908	-		Pf6N2E2_2976	0.73	+0.3
3,471,081	+		Pf6N2E2_2976	0.87	-0.3
3,471,082	-		Pf6N2E2_2976	0.87	-0.7
3,471,178	-				-0.0
3,471,178	-				+0.1
3,471,243	+				+0.2
3,471,243	+				-0.2
3,471,244	-				-1.1
3,471,244	-				+1.2
3,471,244	-				+1.4
3,471,253	+				-2.7
3,471,253	+				+0.3
3,471,253	+				+0.2
3,471,253	+				+0.4
3,471,253	+				-0.5
3,471,254	-				+0.6
3,471,254	-				-0.0
3,471,254	-				-0.0
3,471,254	-				+0.1
3,471,254	-				+0.1
3,471,254	-				+0.3
3,471,254	-				-0.4
3,471,321	+				+0.3
3,471,330	+				+1.0
3,471,330	+				+0.1
3,471,330	+				-0.1
3,471,330	+				-1.1
3,471,330	+				-0.3
3,471,330	+				-0.2
3,471,330	+				+0.3
3,471,331	-				-0.3
3,471,331	-				-0.2
3,471,331	-				-0.6
3,471,331	-				+0.3
3,471,331	-				+0.1
3,471,331	-				+0.2
3,471,331	-				-0.2
3,471,331	-				-0.3
3,471,331	-				+0.5
3,471,331	-				-1.7
3,471,331	-				-2.4
3,471,331	-				+0.1
3,471,331	-				+0.2
3,471,512	+				-0.6
3,471,526	+				+1.0
3,471,526	+				+0.2
3,471,526	+				+0.0
3,471,526	+				+0.4
3,471,526	+				+0.4
3,471,526	+				+0.2
3,471,526	+				+0.7
3,471,553	+				+0.8
3,471,607	+				+0.1
3,471,607	+				+0.9
3,471,607	+				+1.1
3,471,607	+				+0.1
3,471,607	+				+0.1
3,471,607	+				+0.4
3,471,607	+				+0.7
3,471,608	-				+0.6
3,471,608	-				-0.2
3,471,608	-				+0.5
3,471,608	-				+0.3
3,471,608	-				-1.1
3,471,608	-				+0.0
3,471,608	-				-0.8
3,471,705	+				+0.1
3,471,706	-				-0.4
3,471,706	-				-1.4
3,471,706	-				-1.7
3,471,706	-				+0.4
3,471,706	-				-0.0
3,471,706	-				-0.2
3,471,769	+				+0.5
3,471,770	-				-0.1
3,471,770	-				+0.1
3,471,770	-				+0.1
3,471,770	-				-1.0
3,471,770	-				-0.9
3,471,770	-				-0.9
3,471,770	-				-1.3
3,471,940	+		Pf6N2E2_2977	0.18	+0.0
3,471,940	+		Pf6N2E2_2977	0.18	+1.3
3,471,941	-		Pf6N2E2_2977	0.18	-1.4
3,471,941	-		Pf6N2E2_2977	0.18	+1.7
3,471,990	+		Pf6N2E2_2977	0.20	+0.3
3,471,990	+		Pf6N2E2_2977	0.20	+0.4
3,471,990	+		Pf6N2E2_2977	0.20	+0.1
3,471,990	+		Pf6N2E2_2977	0.20	-0.7
3,471,990	+		Pf6N2E2_2977	0.20	-0.6
3,471,991	-		Pf6N2E2_2977	0.20	+0.0
3,471,991	-		Pf6N2E2_2977	0.20	-0.5
3,471,991	-		Pf6N2E2_2977	0.20	+0.5
3,471,991	-		Pf6N2E2_2977	0.20	+1.0
3,472,185	-		Pf6N2E2_2977	0.30	+0.7
3,472,243	+		Pf6N2E2_2977	0.33	+0.4
3,472,243	+		Pf6N2E2_2977	0.33	-0.6
3,472,244	-		Pf6N2E2_2977	0.34	-0.7
3,472,244	-		Pf6N2E2_2977	0.34	+0.2
3,472,318	-		Pf6N2E2_2977	0.37	-0.0
3,472,318	-		Pf6N2E2_2977	0.37	+0.1
3,472,356	-		Pf6N2E2_2977	0.39	-0.4
3,472,462	+		Pf6N2E2_2977	0.45	-0.3
3,472,462	+		Pf6N2E2_2977	0.45	+0.2
3,472,462	+		Pf6N2E2_2977	0.45	+0.0
3,472,462	+		Pf6N2E2_2977	0.45	-0.6
3,472,462	+		Pf6N2E2_2977	0.45	-1.8
3,472,462	+		Pf6N2E2_2977	0.45	+0.2
3,472,462	+		Pf6N2E2_2977	0.45	+0.3
3,472,462	+		Pf6N2E2_2977	0.45	-0.1
3,472,463	-		Pf6N2E2_2977	0.45	-0.0
3,472,463	-		Pf6N2E2_2977	0.45	+0.1
3,472,463	-		Pf6N2E2_2977	0.45	-0.4
3,472,463	-		Pf6N2E2_2977	0.45	+0.5
3,472,463	-		Pf6N2E2_2977	0.45	-0.2
3,472,463	-		Pf6N2E2_2977	0.45	+0.6
3,472,463	-		Pf6N2E2_2977	0.45	+0.1
3,472,501	+		Pf6N2E2_2977	0.47	-0.6
3,472,501	+		Pf6N2E2_2977	0.47	-0.1
3,472,501	+		Pf6N2E2_2977	0.47	-0.4
3,472,501	+		Pf6N2E2_2977	0.47	+0.3
3,472,501	+		Pf6N2E2_2977	0.47	+0.1
3,472,501	+		Pf6N2E2_2977	0.47	-0.3
3,472,502	-		Pf6N2E2_2977	0.47	-0.1
3,472,502	-		Pf6N2E2_2977	0.47	-0.3
3,472,502	-		Pf6N2E2_2977	0.47	+0.6
3,472,502	-		Pf6N2E2_2977	0.47	+0.5
3,472,502	-		Pf6N2E2_2977	0.47	-0.4
3,472,502	-		Pf6N2E2_2977	0.47	+0.2
3,472,516	+		Pf6N2E2_2977	0.48	-0.0
3,472,642	+		Pf6N2E2_2977	0.54	+0.3
3,472,642	+		Pf6N2E2_2977	0.54	-1.2
3,472,643	-		Pf6N2E2_2977	0.55	-0.2
3,472,699	+		Pf6N2E2_2977	0.57	-0.0
3,472,700	-		Pf6N2E2_2977	0.58	-0.0
3,472,700	-		Pf6N2E2_2977	0.58	+0.2
3,472,703	+		Pf6N2E2_2977	0.58	-1.1
3,472,703	+		Pf6N2E2_2977	0.58	+0.1
3,472,703	+		Pf6N2E2_2977	0.58	-0.0
3,472,703	+		Pf6N2E2_2977	0.58	+0.6
3,472,703	+		Pf6N2E2_2977	0.58	-0.4
3,472,703	+		Pf6N2E2_2977	0.58	-0.5
3,472,704	-		Pf6N2E2_2977	0.58	-0.3
3,472,704	-		Pf6N2E2_2977	0.58	+0.4
3,472,781	-		Pf6N2E2_2977	0.62	+0.0
3,472,781	-		Pf6N2E2_2977	0.62	-0.5
3,472,853	+		Pf6N2E2_2977	0.66	+0.1
3,472,919	-		Pf6N2E2_2977	0.69	+0.4
3,472,919	-		Pf6N2E2_2977	0.69	-0.3
3,472,935	+		Pf6N2E2_2977	0.70	+1.5
3,472,935	+		Pf6N2E2_2977	0.70	-1.5
3,472,936	-		Pf6N2E2_2977	0.70	-0.9
3,473,123	+		Pf6N2E2_2977	0.80	+0.5
3,473,123	+		Pf6N2E2_2977	0.80	-0.2
3,473,123	+		Pf6N2E2_2977	0.80	+0.6
3,473,123	+		Pf6N2E2_2977	0.80	-1.6
3,473,124	-		Pf6N2E2_2977	0.80	-0.6
3,473,124	-		Pf6N2E2_2977	0.80	+1.5
3,473,124	-		Pf6N2E2_2977	0.80	-0.3
3,473,135	-		Pf6N2E2_2977	0.80	+0.2
3,473,278	+		Pf6N2E2_2977	0.88	+0.1
3,473,278	+		Pf6N2E2_2977	0.88	-0.7
3,473,278	+		Pf6N2E2_2977	0.88	+0.2
3,473,278	+		Pf6N2E2_2977	0.88	+1.2
3,473,279	-		Pf6N2E2_2977	0.88	+0.3
3,473,279	-		Pf6N2E2_2977	0.88	+0.3
3,473,279	-		Pf6N2E2_2977	0.88	+0.4
3,473,279	-		Pf6N2E2_2977	0.88	+0.4
3,473,279	-		Pf6N2E2_2977	0.88	-0.4
3,473,334	+				+0.1
3,473,335	-				+0.1
3,473,355	+				+0.4
3,473,356	-				-0.2
3,473,356	-				+0.8
3,473,392	+				+0.3
3,473,393	-				+0.2
3,473,393	-				+0.8
3,473,393	-				+0.3
3,473,393	-				+0.3
3,473,393	-				-0.0
3,473,492	+				+0.6
3,473,492	+				-1.2
3,473,493	-				+1.0
3,473,493	-				-0.7
3,473,493	-				-0.4
3,473,493	-				+0.9
3,473,550	+				+0.7
3,473,550	+				-0.1
3,473,550	+				+0.7
3,473,550	+				-0.0
3,473,551	-				+0.4
3,473,581	-				-0.2
3,473,584	+				+0.6
3,473,585	-				+1.6
3,473,585	-				+0.2
3,473,610	+				+1.4
3,473,610	+				+0.4
3,473,611	-				+1.4
3,473,611	-				+0.0
3,473,642	+				+0.2
3,473,642	+				-0.4
3,473,659	+				+0.5
3,473,659	+				-0.1
3,473,659	+				-0.2
3,473,671	+				-0.2
3,473,671	+				-0.4
3,473,671	+				-0.2
3,473,671	+				-0.8
3,473,672	-				+0.7
3,473,672	-				+0.2
3,473,672	-				+0.4
3,473,672	-				-0.2
3,473,672	-				+0.8
3,473,765	+				+0.3
3,473,766	-				-0.4
3,473,776	+				+0.6
3,473,824	+				-0.0
3,473,824	+				+0.5
3,473,892	+				-0.0
3,473,892	+				-0.5
3,473,893	-				+0.7
3,473,910	+				-0.0
3,473,910	+				-0.4
3,473,911	-				-0.0
3,474,210	+		Pf6N2E2_2978	0.32	-0.2
3,474,385	-		Pf6N2E2_2978	0.45	-0.6
3,474,403	-		Pf6N2E2_2978	0.46	-0.5
3,474,498	+		Pf6N2E2_2978	0.53	+0.4
3,474,498	+		Pf6N2E2_2978	0.53	+0.6
3,474,498	+		Pf6N2E2_2978	0.53	-1.3
3,474,498	+		Pf6N2E2_2978	0.53	+0.6
3,474,498	+		Pf6N2E2_2978	0.53	+0.3
3,474,498	+		Pf6N2E2_2978	0.53	+0.5
3,474,499	-		Pf6N2E2_2978	0.54	-0.0
3,474,499	-		Pf6N2E2_2978	0.54	+0.4
3,474,499	-		Pf6N2E2_2978	0.54	+0.3
3,474,499	-		Pf6N2E2_2978	0.54	+0.9
3,474,499	-		Pf6N2E2_2978	0.54	+1.0
3,474,499	-		Pf6N2E2_2978	0.54	+0.3
3,474,499	-		Pf6N2E2_2978	0.54	+0.1
3,474,499	-		Pf6N2E2_2978	0.54	+0.1
3,474,504	+		Pf6N2E2_2978	0.54	-0.7