Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2673

Experiment: 5-Hydroxymethylfurfural 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 10 mM
3,159,331	+		Pf6N2E2_2672	0.79	+0.6
3,159,364	+		Pf6N2E2_2672	0.81	+1.0
3,159,364	+		Pf6N2E2_2672	0.81	+1.0
3,159,365	-		Pf6N2E2_2672	0.81	-0.1
3,159,365	-		Pf6N2E2_2672	0.81	-0.8
3,159,365	-		Pf6N2E2_2672	0.81	-1.0
3,159,428	-		Pf6N2E2_2672	0.84	-0.1
3,159,799	+				+1.4
3,159,799	+				-0.3
3,159,799	+				-0.4
3,159,800	-				+0.7
3,159,800	-				+0.5
3,159,800	-				+0.3
3,159,815	+				-0.1
3,159,822	-				+1.1
3,159,822	-				-0.2
3,159,887	-				-1.2
3,159,902	+				-0.6
3,159,902	+				-0.9
3,159,903	-				+1.0
3,159,958	+				+0.3
3,159,988	-				+1.9
3,160,051	+				-0.1
3,160,051	+				+0.5
3,160,052	-				-0.1
3,160,052	-				-1.0
3,160,052	-				+0.1
3,160,052	-				+0.6
3,160,100	-				+0.7
3,160,100	-				+1.5
3,160,137	+				+0.0
3,160,137	+				-0.2
3,160,138	-				+0.9
3,160,138	-				-0.4
3,160,138	-				+0.0
3,160,298	-				+0.2
3,160,366	-		Pf6N2E2_2673	0.13	-0.9
3,160,366	-		Pf6N2E2_2673	0.13	+0.8
3,160,418	+		Pf6N2E2_2673	0.15	-0.3
3,160,429	+		Pf6N2E2_2673	0.15	+0.1
3,160,429	+		Pf6N2E2_2673	0.15	+0.4
3,160,429	+		Pf6N2E2_2673	0.15	-0.0
3,160,430	-		Pf6N2E2_2673	0.15	-0.2
3,160,430	-		Pf6N2E2_2673	0.15	-0.1
3,160,433	-		Pf6N2E2_2673	0.15	-0.3
3,160,639	+		Pf6N2E2_2673	0.24	+1.0
3,160,698	-		Pf6N2E2_2673	0.26	+0.6
3,160,698	-		Pf6N2E2_2673	0.26	-0.4
3,160,699	+		Pf6N2E2_2673	0.26	-0.2
3,160,699	+		Pf6N2E2_2673	0.26	+1.5
3,160,699	+		Pf6N2E2_2673	0.26	-0.2
3,160,699	+		Pf6N2E2_2673	0.26	-0.0
3,160,699	+		Pf6N2E2_2673	0.26	+0.6
3,160,699	+		Pf6N2E2_2673	0.26	-0.3
3,160,700	-		Pf6N2E2_2673	0.26	+0.3
3,160,700	-		Pf6N2E2_2673	0.26	+1.2
3,160,743	+		Pf6N2E2_2673	0.28	+0.5
3,160,743	+		Pf6N2E2_2673	0.28	+0.7
3,160,743	+		Pf6N2E2_2673	0.28	-0.3
3,160,743	+		Pf6N2E2_2673	0.28	-0.2
3,160,743	+		Pf6N2E2_2673	0.28	-0.2
3,160,743	+		Pf6N2E2_2673	0.28	+0.1
3,160,743	+		Pf6N2E2_2673	0.28	-0.2
3,160,743	+		Pf6N2E2_2673	0.28	+0.7
3,160,743	+		Pf6N2E2_2673	0.28	+0.5
3,160,744	-		Pf6N2E2_2673	0.28	+0.9
3,160,744	-		Pf6N2E2_2673	0.28	+0.5
3,160,744	-		Pf6N2E2_2673	0.28	+0.7
3,160,744	-		Pf6N2E2_2673	0.28	+0.7
3,160,744	-		Pf6N2E2_2673	0.28	+0.2
3,160,744	-		Pf6N2E2_2673	0.28	-0.5
3,160,744	-		Pf6N2E2_2673	0.28	+0.2
3,160,759	+		Pf6N2E2_2673	0.28	+0.2
3,160,774	+		Pf6N2E2_2673	0.29	+0.4
3,160,774	+		Pf6N2E2_2673	0.29	+1.0
3,160,774	+		Pf6N2E2_2673	0.29	-0.5
3,160,774	+		Pf6N2E2_2673	0.29	+2.2
3,160,774	+		Pf6N2E2_2673	0.29	+0.9
3,160,775	-		Pf6N2E2_2673	0.29	+0.5
3,160,775	-		Pf6N2E2_2673	0.29	+0.2
3,160,786	+		Pf6N2E2_2673	0.29	+0.8
3,160,786	+		Pf6N2E2_2673	0.29	+0.0
3,160,787	-		Pf6N2E2_2673	0.29	+0.9
3,160,787	-		Pf6N2E2_2673	0.29	-0.4
3,160,787	-		Pf6N2E2_2673	0.29	-0.4
3,160,787	-		Pf6N2E2_2673	0.29	-0.3
3,160,787	-		Pf6N2E2_2673	0.29	-0.2
3,160,787	-		Pf6N2E2_2673	0.29	+0.4
3,160,789	+		Pf6N2E2_2673	0.30	+0.7
3,160,808	+		Pf6N2E2_2673	0.30	+0.6
3,160,808	+		Pf6N2E2_2673	0.30	+0.7
3,160,887	+		Pf6N2E2_2673	0.33	+0.7
3,160,888	-		Pf6N2E2_2673	0.33	+0.3
3,160,888	-		Pf6N2E2_2673	0.33	-0.1
3,160,889	+		Pf6N2E2_2673	0.33	+0.8
3,160,889	+		Pf6N2E2_2673	0.33	+0.1
3,160,889	+		Pf6N2E2_2673	0.33	+0.3
3,160,889	+		Pf6N2E2_2673	0.33	-0.7
3,160,889	+		Pf6N2E2_2673	0.33	-0.8
3,160,889	+		Pf6N2E2_2673	0.33	-1.0
3,160,889	+		Pf6N2E2_2673	0.33	-0.3
3,160,889	+		Pf6N2E2_2673	0.33	-0.3
3,160,889	+		Pf6N2E2_2673	0.33	+0.9
3,160,889	+		Pf6N2E2_2673	0.33	+0.2
3,160,889	+		Pf6N2E2_2673	0.33	+0.7
3,160,889	+		Pf6N2E2_2673	0.33	+0.6
3,160,889	+		Pf6N2E2_2673	0.33	-0.5
3,160,889	+		Pf6N2E2_2673	0.33	-0.1
3,160,889	+		Pf6N2E2_2673	0.33	+0.2
3,160,890	-		Pf6N2E2_2673	0.34	-0.1
3,160,890	-		Pf6N2E2_2673	0.34	-0.2
3,160,890	-		Pf6N2E2_2673	0.34	+0.9
3,160,893	+		Pf6N2E2_2673	0.34	+0.1
3,160,893	+		Pf6N2E2_2673	0.34	+0.3
3,160,893	+		Pf6N2E2_2673	0.34	-2.0
3,160,893	+		Pf6N2E2_2673	0.34	+0.6
3,160,893	+		Pf6N2E2_2673	0.34	-0.2
3,160,893	+		Pf6N2E2_2673	0.34	+0.5
3,160,893	+		Pf6N2E2_2673	0.34	-1.8
3,160,894	-		Pf6N2E2_2673	0.34	+0.6
3,160,894	-		Pf6N2E2_2673	0.34	-0.3
3,160,909	+		Pf6N2E2_2673	0.34	+1.2
3,160,910	-		Pf6N2E2_2673	0.34	-0.7
3,160,951	+		Pf6N2E2_2673	0.36	-0.1
3,160,951	+		Pf6N2E2_2673	0.36	+1.0
3,160,951	+		Pf6N2E2_2673	0.36	+1.1
3,160,951	+		Pf6N2E2_2673	0.36	-0.1
3,160,952	-		Pf6N2E2_2673	0.36	+0.9
3,160,952	-		Pf6N2E2_2673	0.36	+0.5
3,160,952	-		Pf6N2E2_2673	0.36	+0.5
3,160,952	-		Pf6N2E2_2673	0.36	+0.2
3,160,952	-		Pf6N2E2_2673	0.36	+0.2
3,160,952	-		Pf6N2E2_2673	0.36	+0.8
3,160,952	-		Pf6N2E2_2673	0.36	-0.2
3,161,055	+		Pf6N2E2_2673	0.40	-0.5
3,161,056	-		Pf6N2E2_2673	0.40	-2.9
3,161,056	-		Pf6N2E2_2673	0.40	+0.2
3,161,056	-		Pf6N2E2_2673	0.40	+0.8
3,161,056	-		Pf6N2E2_2673	0.40	+0.2
3,161,056	-		Pf6N2E2_2673	0.40	+0.2
3,161,056	-		Pf6N2E2_2673	0.40	+0.3
3,161,155	+		Pf6N2E2_2673	0.44	-0.1
3,161,155	+		Pf6N2E2_2673	0.44	+0.6
3,161,156	-		Pf6N2E2_2673	0.44	-1.2
3,161,217	+		Pf6N2E2_2673	0.47	-1.4
3,161,218	-		Pf6N2E2_2673	0.47	+0.5
3,161,252	+		Pf6N2E2_2673	0.48	+1.4
3,161,253	-		Pf6N2E2_2673	0.48	+0.2
3,161,253	-		Pf6N2E2_2673	0.48	+0.6
3,161,295	+		Pf6N2E2_2673	0.50	+0.2
3,161,295	+		Pf6N2E2_2673	0.50	+0.0
3,161,295	+		Pf6N2E2_2673	0.50	-0.8
3,161,296	-		Pf6N2E2_2673	0.50	+0.3
3,161,296	-		Pf6N2E2_2673	0.50	+0.2
3,161,296	-		Pf6N2E2_2673	0.50	+0.5
3,161,297	+		Pf6N2E2_2673	0.50	-0.3
3,161,298	-		Pf6N2E2_2673	0.50	-1.5
3,161,298	-		Pf6N2E2_2673	0.50	+0.7
3,161,299	+		Pf6N2E2_2673	0.50	+0.3
3,161,299	+		Pf6N2E2_2673	0.50	-0.2
3,161,299	+		Pf6N2E2_2673	0.50	+0.7
3,161,299	+		Pf6N2E2_2673	0.50	+1.9
3,161,299	+		Pf6N2E2_2673	0.50	-0.2
3,161,299	+		Pf6N2E2_2673	0.50	+1.3
3,161,300	-		Pf6N2E2_2673	0.50	-1.5
3,161,300	-		Pf6N2E2_2673	0.50	+0.4
3,161,300	-		Pf6N2E2_2673	0.50	-0.2
3,161,300	-		Pf6N2E2_2673	0.50	+0.3
3,161,300	-		Pf6N2E2_2673	0.50	-1.8
3,161,300	-		Pf6N2E2_2673	0.50	+0.2
3,161,300	-		Pf6N2E2_2673	0.50	+0.4
3,161,300	-		Pf6N2E2_2673	0.50	+1.9
3,161,300	-		Pf6N2E2_2673	0.50	+0.2
3,161,300	-		Pf6N2E2_2673	0.50	+0.5
3,161,300	-		Pf6N2E2_2673	0.50	+1.0
3,161,300	-		Pf6N2E2_2673	0.50	+2.1
3,161,305	+		Pf6N2E2_2673	0.50	+0.7
3,161,306	-		Pf6N2E2_2673	0.50	+1.5
3,161,404	-		Pf6N2E2_2673	0.54	-2.6
3,161,501	+		Pf6N2E2_2673	0.58	-0.9
3,161,502	-		Pf6N2E2_2673	0.58	-0.0
3,161,602	-		Pf6N2E2_2673	0.62	-0.3
3,161,675	-		Pf6N2E2_2673	0.65	-2.0
3,161,775	-		Pf6N2E2_2673	0.69	+0.2
3,161,840	-		Pf6N2E2_2673	0.71	+0.5
3,161,888	-		Pf6N2E2_2673	0.73	+1.2
3,161,984	-		Pf6N2E2_2673	0.77	+1.4
3,162,043	+		Pf6N2E2_2673	0.80	+1.1
3,162,086	+		Pf6N2E2_2673	0.81	+0.3
3,162,119	+		Pf6N2E2_2673	0.83	-0.4
3,162,120	-		Pf6N2E2_2673	0.83	+0.2
3,162,183	+		Pf6N2E2_2673	0.85	+1.1
3,162,184	-		Pf6N2E2_2673	0.85	-0.6
3,162,184	-		Pf6N2E2_2673	0.85	+0.4
3,162,277	+		Pf6N2E2_2673	0.89	+0.5
3,162,278	-		Pf6N2E2_2673	0.89	+1.0
3,162,281	+		Pf6N2E2_2673	0.89	-1.4
3,162,296	-		Pf6N2E2_2673	0.90	+0.8
3,162,438	+				+1.0
3,162,439	-				+0.7
3,162,554	+				+0.0
3,162,598	-				+0.4
3,162,613	+				+0.3
3,162,614	-				-0.2
3,162,617	+				+0.0
3,162,683	+				+0.8
3,162,683	+				-0.1
3,162,684	-				-0.4
3,162,684	-				+0.6
3,162,684	-				-0.2
3,162,697	+				+0.8
3,162,698	-				+0.5
3,162,713	+				-1.4
3,162,713	+				+0.3
3,162,713	+				+0.6
3,162,713	+				+0.3
3,162,713	+				-0.4
3,162,713	+				+1.1
3,162,714	-				+0.6
3,162,751	+				+1.0
3,162,752	-				-0.3
3,162,780	-				-1.2
3,162,780	-				-0.4
3,162,792	-				-0.8
3,162,907	+				+0.1
3,162,908	-				+0.5
3,163,151	+		Pf6N2E2_2674	0.83	+1.0
3,163,204	-				-0.4
3,163,292	+				+0.5
3,163,293	-				+0.0
3,163,293	-				+1.2
3,163,373	+				+0.6
3,163,373	+				-0.1
3,163,373	+				+0.5
3,163,373	+				+0.1
3,163,373	+				-1.1
3,163,374	-				+0.1
3,163,393	-				+0.3