Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11785

Experiment: R2A with SpecU metal mix 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with SpecU metal mix 1 X
2,610,044	+		LRK54_RS11775	0.36	-1.9
2,610,044	+		LRK54_RS11775	0.36	-2.3
2,610,044	+		LRK54_RS11775	0.36	-2.1
2,610,044	+		LRK54_RS11775	0.36	-2.7
2,610,044	+		LRK54_RS11775	0.36	-2.3
2,610,044	+		LRK54_RS11775	0.36	+0.2
2,610,045	-		LRK54_RS11775	0.36	-1.6
2,610,045	-		LRK54_RS11775	0.36	+0.6
2,610,045	-		LRK54_RS11775	0.36	-0.8
2,610,045	-		LRK54_RS11775	0.36	-1.3
2,610,060	+		LRK54_RS11775	0.38	+0.2
2,610,060	+		LRK54_RS11775	0.38	-2.1
2,610,060	+		LRK54_RS11775	0.38	-1.3
2,610,060	+		LRK54_RS11775	0.38	-1.8
2,610,060	+		LRK54_RS11775	0.38	-1.6
2,610,122	+		LRK54_RS11775	0.48	-1.9
2,610,122	+		LRK54_RS11775	0.48	-2.4
2,610,122	+		LRK54_RS11775	0.48	-3.0
2,610,122	+		LRK54_RS11775	0.48	-0.3
2,610,122	+		LRK54_RS11775	0.48	-2.5
2,610,122	+		LRK54_RS11775	0.48	-1.8
2,610,122	+		LRK54_RS11775	0.48	-1.5
2,610,122	+		LRK54_RS11775	0.48	-3.1
2,610,122	+		LRK54_RS11775	0.48	-0.3
2,610,122	+		LRK54_RS11775	0.48	+0.5
2,610,122	+		LRK54_RS11775	0.48	-0.3
2,610,122	+		LRK54_RS11775	0.48	+1.7
2,610,122	+		LRK54_RS11775	0.48	+0.7
2,610,123	-		LRK54_RS11775	0.48	-1.7
2,610,123	-		LRK54_RS11775	0.48	-2.0
2,610,123	-		LRK54_RS11775	0.48	-1.3
2,610,123	-		LRK54_RS11775	0.48	-0.3
2,610,123	-		LRK54_RS11775	0.48	+0.2
2,610,143	+		LRK54_RS11775	0.51	-0.8
2,610,144	-		LRK54_RS11775	0.51	-1.8
2,610,164	+		LRK54_RS11775	0.54	-1.1
2,610,164	+		LRK54_RS11775	0.54	-0.1
2,610,164	+		LRK54_RS11775	0.54	-1.3
2,610,164	+		LRK54_RS11775	0.54	-3.2
2,610,164	+		LRK54_RS11775	0.54	-0.6
2,610,164	+		LRK54_RS11775	0.54	-2.2
2,610,164	+		LRK54_RS11775	0.54	-0.3
2,610,164	+		LRK54_RS11775	0.54	+0.2
2,610,164	+		LRK54_RS11775	0.54	-1.8
2,610,164	+		LRK54_RS11775	0.54	-0.8
2,610,164	+		LRK54_RS11775	0.54	-1.3
2,610,164	+		LRK54_RS11775	0.54	+0.2
2,610,164	+		LRK54_RS11775	0.54	-1.9
2,610,164	+		LRK54_RS11775	0.54	+0.3
2,610,164	+		LRK54_RS11775	0.54	-0.7
2,610,164	+		LRK54_RS11775	0.54	-0.3
2,610,164	+		LRK54_RS11775	0.54	-0.3
2,610,164	+		LRK54_RS11775	0.54	-1.6
2,610,164	+		LRK54_RS11775	0.54	-1.1
2,610,164	+		LRK54_RS11775	0.54	-0.9
2,610,164	+		LRK54_RS11775	0.54	+1.1
2,610,164	+		LRK54_RS11775	0.54	-1.8
2,610,164	+		LRK54_RS11775	0.54	+0.7
2,610,164	+		LRK54_RS11775	0.54	+0.7
2,610,164	+		LRK54_RS11775	0.54	-0.3
2,610,165	-		LRK54_RS11775	0.54	-1.8
2,610,165	-		LRK54_RS11775	0.54	-0.8
2,610,165	-		LRK54_RS11775	0.54	+0.2
2,610,165	-		LRK54_RS11775	0.54	-0.9
2,610,165	-		LRK54_RS11775	0.54	-0.3
2,610,165	-		LRK54_RS11775	0.54	-0.5
2,610,165	-		LRK54_RS11775	0.54	-1.5
2,610,165	-		LRK54_RS11775	0.54	-1.5
2,610,165	-		LRK54_RS11775	0.54	-0.5
2,610,165	-		LRK54_RS11775	0.54	-1.8
2,610,165	-		LRK54_RS11775	0.54	+2.1
2,610,165	-		LRK54_RS11775	0.54	-2.6
2,610,165	-		LRK54_RS11775	0.54	-1.1
2,610,165	-		LRK54_RS11775	0.54	-0.6
2,610,165	-		LRK54_RS11775	0.54	-1.8
2,610,165	-		LRK54_RS11775	0.54	-0.7
2,610,165	-		LRK54_RS11775	0.54	-0.6
2,610,165	-		LRK54_RS11775	0.54	+0.2
2,610,165	-		LRK54_RS11775	0.54	-1.3
2,610,275	+		LRK54_RS11775	0.70	-1.0
2,610,275	+		LRK54_RS11775	0.70	-0.3
2,610,275	+		LRK54_RS11775	0.70	-0.9
2,610,275	+		LRK54_RS11775	0.70	-0.9
2,610,275	+		LRK54_RS11775	0.70	-3.0
2,610,275	+		LRK54_RS11775	0.70	-2.3
2,610,275	+		LRK54_RS11775	0.70	-1.6
2,610,275	+		LRK54_RS11775	0.70	-0.6
2,610,275	+		LRK54_RS11775	0.70	-0.3
2,610,276	-		LRK54_RS11775	0.70	+0.1
2,610,276	-		LRK54_RS11775	0.70	-1.2
2,610,276	-		LRK54_RS11775	0.70	-2.1
2,610,276	-		LRK54_RS11775	0.70	-1.2
2,610,276	-		LRK54_RS11775	0.70	-0.7
2,610,276	-		LRK54_RS11775	0.70	-1.6
2,610,276	-		LRK54_RS11775	0.70	+1.2
2,610,276	-		LRK54_RS11775	0.70	-1.6
2,610,276	-		LRK54_RS11775	0.70	-1.1
2,610,276	-		LRK54_RS11775	0.70	-0.7
2,610,276	-		LRK54_RS11775	0.70	-1.6
2,610,276	-		LRK54_RS11775	0.70	-2.1
2,610,276	-		LRK54_RS11775	0.70	-1.6
2,610,314	+		LRK54_RS11775	0.76	-1.9
2,610,314	+		LRK54_RS11775	0.76	-1.4
2,610,314	+		LRK54_RS11775	0.76	-0.6
2,610,314	+		LRK54_RS11775	0.76	-1.6
2,610,315	-		LRK54_RS11775	0.76	-1.0
2,610,315	-		LRK54_RS11775	0.76	-1.8
2,610,315	-		LRK54_RS11775	0.76	-2.3
2,610,315	-		LRK54_RS11775	0.76	-1.1
2,610,315	-		LRK54_RS11775	0.76	+1.7
2,610,315	-		LRK54_RS11775	0.76	-2.6
2,610,315	-		LRK54_RS11775	0.76	-1.0
2,610,341	+		LRK54_RS11775	0.80	-0.3
2,610,341	+		LRK54_RS11775	0.80	-3.2
2,610,341	+		LRK54_RS11775	0.80	-2.1
2,610,341	+		LRK54_RS11775	0.80	+0.7
2,610,341	+		LRK54_RS11775	0.80	-1.3
2,610,341	+		LRK54_RS11775	0.80	-0.8
2,610,341	+		LRK54_RS11775	0.80	-2.1
2,610,341	+		LRK54_RS11775	0.80	-1.6
2,610,341	+		LRK54_RS11775	0.80	-1.0
2,610,341	+		LRK54_RS11775	0.80	-2.7
2,610,341	+		LRK54_RS11775	0.80	+0.0
2,610,341	+		LRK54_RS11775	0.80	-1.1
2,610,342	-		LRK54_RS11775	0.80	-1.8
2,610,342	-		LRK54_RS11775	0.80	-0.7
2,610,342	-		LRK54_RS11775	0.80	-0.6
2,610,342	-		LRK54_RS11775	0.80	-4.1
2,610,342	-		LRK54_RS11775	0.80	+0.7
2,610,342	-		LRK54_RS11775	0.80	-0.3
2,610,342	-		LRK54_RS11775	0.80	-1.3
2,610,342	-		LRK54_RS11775	0.80	+0.0
2,610,342	-		LRK54_RS11775	0.80	-1.3
2,610,342	-		LRK54_RS11775	0.80	-0.3
2,610,342	-		LRK54_RS11775	0.80	-1.4
2,610,342	-		LRK54_RS11775	0.80	-0.5
2,610,342	-		LRK54_RS11775	0.80	+2.3
2,610,342	-		LRK54_RS11775	0.80	-2.0
2,610,342	-		LRK54_RS11775	0.80	-2.3
2,610,342	-		LRK54_RS11775	0.80	-2.8
2,610,342	-		LRK54_RS11775	0.80	-1.2
2,610,342	-		LRK54_RS11775	0.80	-1.6
2,610,342	-		LRK54_RS11775	0.80	-0.6
2,610,353	+		LRK54_RS11775	0.82	-3.3
2,610,353	+		LRK54_RS11775	0.82	-0.8
2,610,353	+		LRK54_RS11775	0.82	-1.7
2,610,354	-		LRK54_RS11775	0.82	-1.7
2,610,354	-		LRK54_RS11775	0.82	-1.3
2,610,354	-		LRK54_RS11775	0.82	-1.3
2,610,354	-		LRK54_RS11775	0.82	-1.4
2,610,354	-		LRK54_RS11775	0.82	-0.9
2,610,354	-		LRK54_RS11775	0.82	-0.3
2,610,354	-		LRK54_RS11775	0.82	-0.6
2,610,412	+				-0.3
2,610,552	+		LRK54_RS11780	0.26	-1.6
2,610,780	+				-1.1
2,610,780	+				+0.4
2,610,780	+				-1.0
2,610,780	+				+1.1
2,610,780	+				+0.3
2,610,780	+				+0.2
2,610,780	+				-2.1
2,610,780	+				+0.0
2,610,780	+				-1.6
2,610,780	+				-0.1
2,610,780	+				+0.4
2,610,780	+				-1.1
2,610,780	+				-0.3
2,610,780	+				+1.0
2,610,780	+				+0.1
2,610,780	+				-1.7
2,610,781	-				+0.9
2,610,781	-				+1.7
2,610,781	-				+0.5
2,610,781	-				+1.3
2,610,781	-				+2.1
2,610,781	-				-0.1
2,610,781	-				+1.2
2,610,781	-				+1.3
2,610,781	-				+0.4
2,610,781	-				+0.9
2,610,781	-				-0.3
2,610,781	-				+1.1
2,610,781	-				+1.2
2,610,781	-				+1.5
2,610,781	-				+2.4
2,610,781	-				+2.0
2,610,987	+		LRK54_RS11785	0.16	-2.1
2,610,987	+		LRK54_RS11785	0.16	-0.3
2,610,987	+		LRK54_RS11785	0.16	-1.8
2,610,987	+		LRK54_RS11785	0.16	+0.4
2,610,987	+		LRK54_RS11785	0.16	-1.1
2,610,987	+		LRK54_RS11785	0.16	-1.3
2,610,987	+		LRK54_RS11785	0.16	-0.3
2,610,987	+		LRK54_RS11785	0.16	-0.8
2,610,987	+		LRK54_RS11785	0.16	-1.0
2,610,987	+		LRK54_RS11785	0.16	-2.1
2,610,988	-		LRK54_RS11785	0.16	-0.7
2,610,988	-		LRK54_RS11785	0.16	-1.2
2,610,988	-		LRK54_RS11785	0.16	-1.3
2,610,988	-		LRK54_RS11785	0.16	-0.7
2,610,988	-		LRK54_RS11785	0.16	+0.0
2,610,988	-		LRK54_RS11785	0.16	-0.8
2,610,988	-		LRK54_RS11785	0.16	-0.3
2,610,988	-		LRK54_RS11785	0.16	-1.3
2,610,988	-		LRK54_RS11785	0.16	-0.7
2,610,988	-		LRK54_RS11785	0.16	-1.3
2,610,988	-		LRK54_RS11785	0.16	-1.8
2,610,988	-		LRK54_RS11785	0.16	-1.3
2,610,988	-		LRK54_RS11785	0.16	-0.5
2,610,988	-		LRK54_RS11785	0.16	-0.4
2,610,988	-		LRK54_RS11785	0.16	+0.7
2,610,996	+		LRK54_RS11785	0.17	-0.6
2,610,996	+		LRK54_RS11785	0.17	-2.6
2,610,996	+		LRK54_RS11785	0.17	+0.3
2,610,996	+		LRK54_RS11785	0.17	-0.6
2,610,996	+		LRK54_RS11785	0.17	+0.1
2,610,996	+		LRK54_RS11785	0.17	-0.8
2,610,997	-		LRK54_RS11785	0.18	-1.6
2,610,997	-		LRK54_RS11785	0.18	-1.6
2,610,997	-		LRK54_RS11785	0.18	-1.7
2,610,997	-		LRK54_RS11785	0.18	+0.7
2,610,997	-		LRK54_RS11785	0.18	-1.6
2,610,997	-		LRK54_RS11785	0.18	+0.7
2,610,997	-		LRK54_RS11785	0.18	-0.1
2,610,997	-		LRK54_RS11785	0.18	-3.0
2,610,997	-		LRK54_RS11785	0.18	-1.3
2,610,997	-		LRK54_RS11785	0.18	-0.3
2,610,997	-		LRK54_RS11785	0.18	-2.0
2,610,997	-		LRK54_RS11785	0.18	-0.3
2,610,997	-		LRK54_RS11785	0.18	-1.3
2,611,035	+		LRK54_RS11785	0.22	-1.8
2,611,035	+		LRK54_RS11785	0.22	+2.3
2,611,035	+		LRK54_RS11785	0.22	-1.0
2,611,035	+		LRK54_RS11785	0.22	-1.1
2,611,035	+		LRK54_RS11785	0.22	-1.3
2,611,035	+		LRK54_RS11785	0.22	-0.6
2,611,035	+		LRK54_RS11785	0.22	-3.0
2,611,035	+		LRK54_RS11785	0.22	-3.3
2,611,035	+		LRK54_RS11785	0.22	-1.0
2,611,035	+		LRK54_RS11785	0.22	-2.0
2,611,035	+		LRK54_RS11785	0.22	-2.7
2,611,035	+		LRK54_RS11785	0.22	+0.0
2,611,036	-		LRK54_RS11785	0.22	-1.1
2,611,036	-		LRK54_RS11785	0.22	+0.4
2,611,036	-		LRK54_RS11785	0.22	+0.5
2,611,036	-		LRK54_RS11785	0.22	+0.7
2,611,036	-		LRK54_RS11785	0.22	-1.8
2,611,036	-		LRK54_RS11785	0.22	+0.7
2,611,036	-		LRK54_RS11785	0.22	-1.6
2,611,036	-		LRK54_RS11785	0.22	-2.0
2,611,036	-		LRK54_RS11785	0.22	-1.7
2,611,036	-		LRK54_RS11785	0.22	+0.7
2,611,036	-		LRK54_RS11785	0.22	-0.8
2,611,036	-		LRK54_RS11785	0.22	-1.5
2,611,036	-		LRK54_RS11785	0.22	-1.3
2,611,036	-		LRK54_RS11785	0.22	-1.7
2,611,036	-		LRK54_RS11785	0.22	-0.7
2,611,036	-		LRK54_RS11785	0.22	-1.4
2,611,036	-		LRK54_RS11785	0.22	-1.4
2,611,101	+		LRK54_RS11785	0.30	+0.7
2,611,101	+		LRK54_RS11785	0.30	-1.8
2,611,101	+		LRK54_RS11785	0.30	-0.1
2,611,101	+		LRK54_RS11785	0.30	-1.6
2,611,101	+		LRK54_RS11785	0.30	-1.8
2,611,101	+		LRK54_RS11785	0.30	-2.7
2,611,101	+		LRK54_RS11785	0.30	+1.7
2,611,101	+		LRK54_RS11785	0.30	-1.1
2,611,101	+		LRK54_RS11785	0.30	-0.8
2,611,101	+		LRK54_RS11785	0.30	-2.3
2,611,101	+		LRK54_RS11785	0.30	-2.6
2,611,101	+		LRK54_RS11785	0.30	-0.7
2,611,101	+		LRK54_RS11785	0.30	-0.7
2,611,101	+		LRK54_RS11785	0.30	-3.5
2,611,101	+		LRK54_RS11785	0.30	-1.6
2,611,101	+		LRK54_RS11785	0.30	-1.6
2,611,101	+		LRK54_RS11785	0.30	-0.8
2,611,101	+		LRK54_RS11785	0.30	-2.3
2,611,101	+		LRK54_RS11785	0.30	-1.7
2,611,102	-		LRK54_RS11785	0.30	+0.7
2,611,102	-		LRK54_RS11785	0.30	-3.1
2,611,102	-		LRK54_RS11785	0.30	-2.1
2,611,102	-		LRK54_RS11785	0.30	-2.3
2,611,102	-		LRK54_RS11785	0.30	+0.7
2,611,102	-		LRK54_RS11785	0.30	+0.3
2,611,102	-		LRK54_RS11785	0.30	-0.8
2,611,102	-		LRK54_RS11785	0.30	-2.4
2,611,102	-		LRK54_RS11785	0.30	-1.1
2,611,102	-		LRK54_RS11785	0.30	-0.2
2,611,102	-		LRK54_RS11785	0.30	+0.4
2,611,102	-		LRK54_RS11785	0.30	-1.1
2,611,102	-		LRK54_RS11785	0.30	-2.0
2,611,102	-		LRK54_RS11785	0.30	-1.8
2,611,102	-		LRK54_RS11785	0.30	+0.7
2,611,102	-		LRK54_RS11785	0.30	-0.3
2,611,102	-		LRK54_RS11785	0.30	-1.7
2,611,102	-		LRK54_RS11785	0.30	-0.3
2,611,102	-		LRK54_RS11785	0.30	-0.8
2,611,102	-		LRK54_RS11785	0.30	-1.0
2,611,102	-		LRK54_RS11785	0.30	-0.8
2,611,102	-		LRK54_RS11785	0.30	-0.3
2,611,102	-		LRK54_RS11785	0.30	+1.0
2,611,102	-		LRK54_RS11785	0.30	-0.6
2,611,102	-		LRK54_RS11785	0.30	-1.6
2,611,102	-		LRK54_RS11785	0.30	+0.7
2,611,102	-		LRK54_RS11785	0.30	+0.7
2,611,102	-		LRK54_RS11785	0.30	-1.8
2,611,102	-		LRK54_RS11785	0.30	-0.7
2,611,102	-		LRK54_RS11785	0.30	-1.1
2,611,102	-		LRK54_RS11785	0.30	-1.3
2,611,102	-		LRK54_RS11785	0.30	-1.6
2,611,102	-		LRK54_RS11785	0.30	-0.8
2,611,102	-		LRK54_RS11785	0.30	-1.4
2,611,119	+		LRK54_RS11785	0.32	-1.8
2,611,119	+		LRK54_RS11785	0.32	+0.7
2,611,119	+		LRK54_RS11785	0.32	-0.8
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2,611,119	+		LRK54_RS11785	0.32	-1.0
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2,611,120	-		LRK54_RS11785	0.32	+0.5
2,611,120	-		LRK54_RS11785	0.32	-0.7
2,611,120	-		LRK54_RS11785	0.32	-1.6
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2,611,134	+		LRK54_RS11785	0.34	+0.1
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2,611,134	+		LRK54_RS11785	0.34	-2.0
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2,611,135	-		LRK54_RS11785	0.34	-2.1
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2,611,135	-		LRK54_RS11785	0.34	-0.3
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2,611,135	-		LRK54_RS11785	0.34	-1.1
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2,611,152	+		LRK54_RS11785	0.36	-1.1
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2,611,152	+		LRK54_RS11785	0.36	-1.4
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2,611,176	+		LRK54_RS11785	0.39	-2.1
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2,611,177	-		LRK54_RS11785	0.39	-2.8
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2,611,213	+		LRK54_RS11785	0.44	-1.4
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2,611,409	+		LRK54_RS11785	0.67	-2.7
2,611,409	+		LRK54_RS11785	0.67	-2.9
2,611,409	+		LRK54_RS11785	0.67	-1.3
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2,611,551	+		LRK54_RS11785	0.84	-1.8
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2,611,661	+				-1.1
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2,611,710	+				-0.4
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2,611,710	+				-3.1
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