Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10925

Experiment: R2A with SpecU metal mix 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with SpecU metal mix 1 X
2,417,167	+		LRK54_RS10920	0.57	-0.4
2,417,167	+		LRK54_RS10920	0.57	+0.1
2,417,167	+		LRK54_RS10920	0.57	+0.5
2,417,167	+		LRK54_RS10920	0.57	+1.5
2,417,167	+		LRK54_RS10920	0.57	-1.6
2,417,167	+		LRK54_RS10920	0.57	+0.3
2,417,167	+		LRK54_RS10920	0.57	+0.7
2,417,167	+		LRK54_RS10920	0.57	-0.1
2,417,167	+		LRK54_RS10920	0.57	-0.7
2,417,167	+		LRK54_RS10920	0.57	-0.5
2,417,167	+		LRK54_RS10920	0.57	-0.1
2,417,167	+		LRK54_RS10920	0.57	-0.4
2,417,167	+		LRK54_RS10920	0.57	+1.7
2,417,167	+		LRK54_RS10920	0.57	+0.7
2,417,167	+		LRK54_RS10920	0.57	-0.9
2,417,167	+		LRK54_RS10920	0.57	+0.6
2,417,168	-		LRK54_RS10920	0.57	-0.3
2,417,168	-		LRK54_RS10920	0.57	-0.1
2,417,168	-		LRK54_RS10920	0.57	+1.2
2,417,168	-		LRK54_RS10920	0.57	+2.4
2,417,168	-		LRK54_RS10920	0.57	+0.4
2,417,168	-		LRK54_RS10920	0.57	+0.1
2,417,168	-		LRK54_RS10920	0.57	+0.1
2,417,168	-		LRK54_RS10920	0.57	+1.1
2,417,168	-		LRK54_RS10920	0.57	+1.5
2,417,168	-		LRK54_RS10920	0.57	+2.2
2,417,168	-		LRK54_RS10920	0.57	+0.2
2,417,168	-		LRK54_RS10920	0.57	-0.8
2,417,194	+		LRK54_RS10920	0.58	+1.3
2,417,194	+		LRK54_RS10920	0.58	-0.1
2,417,194	+		LRK54_RS10920	0.58	+1.1
2,417,194	+		LRK54_RS10920	0.58	+0.3
2,417,194	+		LRK54_RS10920	0.58	+0.9
2,417,194	+		LRK54_RS10920	0.58	-0.3
2,417,194	+		LRK54_RS10920	0.58	-1.1
2,417,194	+		LRK54_RS10920	0.58	+0.2
2,417,194	+		LRK54_RS10920	0.58	+0.3
2,417,194	+		LRK54_RS10920	0.58	+0.6
2,417,194	+		LRK54_RS10920	0.58	+0.1
2,417,194	+		LRK54_RS10920	0.58	+0.7
2,417,194	+		LRK54_RS10920	0.58	+2.0
2,417,194	+		LRK54_RS10920	0.58	+0.4
2,417,194	+		LRK54_RS10920	0.58	+0.2
2,417,194	+		LRK54_RS10920	0.58	-0.3
2,417,194	+		LRK54_RS10920	0.58	+0.5
2,417,194	+		LRK54_RS10920	0.58	+1.1
2,417,194	+		LRK54_RS10920	0.58	+0.7
2,417,194	+		LRK54_RS10920	0.58	-0.4
2,417,194	+		LRK54_RS10920	0.58	+0.7
2,417,194	+		LRK54_RS10920	0.58	+0.7
2,417,194	+		LRK54_RS10920	0.58	+1.4
2,417,194	+		LRK54_RS10920	0.58	+0.2
2,417,194	+		LRK54_RS10920	0.58	-1.2
2,417,194	+		LRK54_RS10920	0.58	-0.1
2,417,195	-		LRK54_RS10920	0.58	+0.7
2,417,195	-		LRK54_RS10920	0.58	+0.2
2,417,195	-		LRK54_RS10920	0.58	+0.5
2,417,195	-		LRK54_RS10920	0.58	-1.3
2,417,195	-		LRK54_RS10920	0.58	-0.7
2,417,195	-		LRK54_RS10920	0.58	+1.1
2,417,195	-		LRK54_RS10920	0.58	+0.4
2,417,195	-		LRK54_RS10920	0.58	-0.2
2,417,195	-		LRK54_RS10920	0.58	+2.7
2,417,195	-		LRK54_RS10920	0.58	+0.6
2,417,195	-		LRK54_RS10920	0.58	+0.6
2,417,195	-		LRK54_RS10920	0.58	+0.3
2,417,195	-		LRK54_RS10920	0.58	+1.2
2,417,195	-		LRK54_RS10920	0.58	+0.3
2,417,195	-		LRK54_RS10920	0.58	+1.3
2,417,195	-		LRK54_RS10920	0.58	+0.7
2,417,195	-		LRK54_RS10920	0.58	+0.3
2,417,195	-		LRK54_RS10920	0.58	-0.3
2,417,195	-		LRK54_RS10920	0.58	+0.9
2,417,195	-		LRK54_RS10920	0.58	-0.1
2,417,195	-		LRK54_RS10920	0.58	+1.3
2,417,195	-		LRK54_RS10920	0.58	+1.1
2,417,195	-		LRK54_RS10920	0.58	+0.4
2,417,195	-		LRK54_RS10920	0.58	+0.7
2,417,195	-		LRK54_RS10920	0.58	+0.9
2,417,195	-		LRK54_RS10920	0.58	-0.9
2,417,195	-		LRK54_RS10920	0.58	+1.7
2,417,195	-		LRK54_RS10920	0.58	+0.9
2,417,195	-		LRK54_RS10920	0.58	+0.1
2,417,195	-		LRK54_RS10920	0.58	+0.1
2,417,195	-		LRK54_RS10920	0.58	+0.1
2,417,195	-		LRK54_RS10920	0.58	+0.4
2,417,266	+		LRK54_RS10920	0.62	+1.0
2,417,266	+		LRK54_RS10920	0.62	+0.3
2,417,266	+		LRK54_RS10920	0.62	+0.7
2,417,266	+		LRK54_RS10920	0.62	+0.8
2,417,267	-		LRK54_RS10920	0.62	+0.5
2,417,267	-		LRK54_RS10920	0.62	+0.1
2,417,267	-		LRK54_RS10920	0.62	+0.7
2,417,267	-		LRK54_RS10920	0.62	+0.6
2,417,267	-		LRK54_RS10920	0.62	+1.3
2,417,267	-		LRK54_RS10920	0.62	+0.5
2,417,296	+		LRK54_RS10920	0.64	+0.7
2,417,296	+		LRK54_RS10920	0.64	+0.6
2,417,296	+		LRK54_RS10920	0.64	+0.1
2,417,296	+		LRK54_RS10920	0.64	+0.7
2,417,296	+		LRK54_RS10920	0.64	+0.5
2,417,296	+		LRK54_RS10920	0.64	-0.4
2,417,296	+		LRK54_RS10920	0.64	+0.5
2,417,296	+		LRK54_RS10920	0.64	+0.3
2,417,296	+		LRK54_RS10920	0.64	-0.3
2,417,296	+		LRK54_RS10920	0.64	+0.4
2,417,296	+		LRK54_RS10920	0.64	+0.4
2,417,296	+		LRK54_RS10920	0.64	+1.1
2,417,296	+		LRK54_RS10920	0.64	+0.7
2,417,296	+		LRK54_RS10920	0.64	+0.4
2,417,296	+		LRK54_RS10920	0.64	+1.1
2,417,296	+		LRK54_RS10920	0.64	+0.8
2,417,296	+		LRK54_RS10920	0.64	+1.9
2,417,296	+		LRK54_RS10920	0.64	+0.1
2,417,296	+		LRK54_RS10920	0.64	+0.1
2,417,296	+		LRK54_RS10920	0.64	+1.5
2,417,296	+		LRK54_RS10920	0.64	-0.3
2,417,296	+		LRK54_RS10920	0.64	+0.6
2,417,296	+		LRK54_RS10920	0.64	+1.1
2,417,296	+		LRK54_RS10920	0.64	-1.3
2,417,296	+		LRK54_RS10920	0.64	+1.1
2,417,296	+		LRK54_RS10920	0.64	-0.4
2,417,296	+		LRK54_RS10920	0.64	+0.7
2,417,296	+		LRK54_RS10920	0.64	+0.0
2,417,296	+		LRK54_RS10920	0.64	-0.2
2,417,296	+		LRK54_RS10920	0.64	-1.8
2,417,296	+		LRK54_RS10920	0.64	+1.9
2,417,296	+		LRK54_RS10920	0.64	-0.1
2,417,296	+		LRK54_RS10920	0.64	+0.4
2,417,296	+		LRK54_RS10920	0.64	-0.5
2,417,297	-		LRK54_RS10920	0.64	-1.3
2,417,297	-		LRK54_RS10920	0.64	+0.2
2,417,297	-		LRK54_RS10920	0.64	-0.3
2,417,297	-		LRK54_RS10920	0.64	-0.3
2,417,297	-		LRK54_RS10920	0.64	-0.0
2,417,297	-		LRK54_RS10920	0.64	+0.3
2,417,297	-		LRK54_RS10920	0.64	+0.9
2,417,297	-		LRK54_RS10920	0.64	+0.3
2,417,297	-		LRK54_RS10920	0.64	+0.7
2,417,297	-		LRK54_RS10920	0.64	+0.3
2,417,297	-		LRK54_RS10920	0.64	+1.0
2,417,297	-		LRK54_RS10920	0.64	-0.9
2,417,297	-		LRK54_RS10920	0.64	+0.5
2,417,297	-		LRK54_RS10920	0.64	-0.0
2,417,297	-		LRK54_RS10920	0.64	-0.0
2,417,297	-		LRK54_RS10920	0.64	+0.5
2,417,297	-		LRK54_RS10920	0.64	+0.0
2,417,297	-		LRK54_RS10920	0.64	+0.6
2,417,297	-		LRK54_RS10920	0.64	-0.2
2,417,297	-		LRK54_RS10920	0.64	+0.7
2,417,297	-		LRK54_RS10920	0.64	+0.1
2,417,297	-		LRK54_RS10920	0.64	+0.1
2,417,297	-		LRK54_RS10920	0.64	+1.0
2,417,297	-		LRK54_RS10920	0.64	-0.5
2,417,297	-		LRK54_RS10920	0.64	+0.0
2,417,297	-		LRK54_RS10920	0.64	+0.3
2,417,297	-		LRK54_RS10920	0.64	+0.2
2,417,297	-		LRK54_RS10920	0.64	+1.5
2,417,297	-		LRK54_RS10920	0.64	+0.0
2,417,297	-		LRK54_RS10920	0.64	+0.8
2,417,297	-		LRK54_RS10920	0.64	+0.3
2,417,297	-		LRK54_RS10920	0.64	+1.3
2,417,297	-		LRK54_RS10920	0.64	-0.4
2,417,297	-		LRK54_RS10920	0.64	+3.5
2,417,297	-		LRK54_RS10920	0.64	+0.7
2,417,297	-		LRK54_RS10920	0.64	+0.3
2,417,297	-		LRK54_RS10920	0.64	+1.7
2,417,297	-		LRK54_RS10920	0.64	-0.9
2,417,297	-		LRK54_RS10920	0.64	+0.1
2,417,806	-				+1.0
2,417,993	+				+0.5
2,417,994	-				-2.6
2,417,994	-				+0.7
2,418,007	+				+0.3
2,418,007	+				-0.2
2,418,008	-				-1.9
2,418,067	+				-1.6
2,418,067	+				-2.7
2,418,067	+				-1.3
2,418,067	+				-1.3
2,418,067	+				-0.9
2,418,067	+				-1.6
2,418,068	-				-0.8
2,418,068	-				-1.8
2,418,068	-				-1.3
2,418,068	-				-3.0
2,418,425	-		LRK54_RS10925	0.57	-1.5
2,418,425	-		LRK54_RS10925	0.57	-0.8
2,418,915	+		LRK54_RS10930	0.21	-2.9
2,418,915	+		LRK54_RS10930	0.21	-1.1
2,418,915	+		LRK54_RS10930	0.21	-0.9
2,418,915	+		LRK54_RS10930	0.21	-1.2
2,418,915	+		LRK54_RS10930	0.21	-1.7
2,418,915	+		LRK54_RS10930	0.21	-0.6
2,418,915	+		LRK54_RS10930	0.21	-2.4
2,418,915	+		LRK54_RS10930	0.21	+0.7
2,418,915	+		LRK54_RS10930	0.21	-3.1
2,418,915	+		LRK54_RS10930	0.21	+2.3
2,418,915	+		LRK54_RS10930	0.21	-2.2
2,418,915	+		LRK54_RS10930	0.21	-1.9
2,418,915	+		LRK54_RS10930	0.21	+0.7
2,418,915	+		LRK54_RS10930	0.21	-1.4
2,418,915	+		LRK54_RS10930	0.21	-2.1
2,418,915	+		LRK54_RS10930	0.21	-1.1
2,418,915	+		LRK54_RS10930	0.21	-2.6
2,418,915	+		LRK54_RS10930	0.21	+0.1
2,418,915	+		LRK54_RS10930	0.21	-1.1
2,418,915	+		LRK54_RS10930	0.21	-0.3
2,418,915	+		LRK54_RS10930	0.21	-1.3
2,418,915	+		LRK54_RS10930	0.21	-1.1
2,418,915	+		LRK54_RS10930	0.21	-0.3
2,418,915	+		LRK54_RS10930	0.21	-3.4
2,418,915	+		LRK54_RS10930	0.21	-2.3
2,418,915	+		LRK54_RS10930	0.21	+0.1
2,418,915	+		LRK54_RS10930	0.21	-3.1
2,418,916	-		LRK54_RS10930	0.21	-1.3
2,418,916	-		LRK54_RS10930	0.21	-1.9
2,418,916	-		LRK54_RS10930	0.21	-0.7
2,418,916	-		LRK54_RS10930	0.21	-0.5
2,418,916	-		LRK54_RS10930	0.21	+0.7
2,418,916	-		LRK54_RS10930	0.21	-1.0
2,418,916	-		LRK54_RS10930	0.21	-1.9
2,418,916	-		LRK54_RS10930	0.21	-0.9
2,418,916	-		LRK54_RS10930	0.21	-2.1
2,418,916	-		LRK54_RS10930	0.21	-2.1
2,418,916	-		LRK54_RS10930	0.21	-0.9
2,418,916	-		LRK54_RS10930	0.21	-1.0
2,418,916	-		LRK54_RS10930	0.21	-0.9
2,418,916	-		LRK54_RS10930	0.21	-1.3
2,418,916	-		LRK54_RS10930	0.21	-2.1
2,418,916	-		LRK54_RS10930	0.21	-1.0
2,418,916	-		LRK54_RS10930	0.21	-2.1
2,418,916	-		LRK54_RS10930	0.21	-2.1
2,418,916	-		LRK54_RS10930	0.21	+0.7
2,418,916	-		LRK54_RS10930	0.21	-1.8
2,418,916	-		LRK54_RS10930	0.21	-3.0
2,418,916	-		LRK54_RS10930	0.21	+0.7
2,418,916	-		LRK54_RS10930	0.21	-2.1
2,418,916	-		LRK54_RS10930	0.21	-0.3
2,419,155	+		LRK54_RS10930	0.45	-1.3
2,419,155	+		LRK54_RS10930	0.45	-2.7
2,419,155	+		LRK54_RS10930	0.45	-2.7
2,419,155	+		LRK54_RS10930	0.45	-2.4
2,419,155	+		LRK54_RS10930	0.45	-3.1
2,419,155	+		LRK54_RS10930	0.45	-1.8
2,419,155	+		LRK54_RS10930	0.45	-1.6
2,419,155	+		LRK54_RS10930	0.45	-0.9
2,419,155	+		LRK54_RS10930	0.45	-0.7
2,419,155	+		LRK54_RS10930	0.45	+0.4
2,419,155	+		LRK54_RS10930	0.45	-0.6
2,419,155	+		LRK54_RS10930	0.45	-1.5
2,419,155	+		LRK54_RS10930	0.45	-1.6
2,419,155	+		LRK54_RS10930	0.45	-1.1
2,419,156	-		LRK54_RS10930	0.45	-1.1
2,419,156	-		LRK54_RS10930	0.45	+0.7
2,419,156	-		LRK54_RS10930	0.45	-1.9
2,419,156	-		LRK54_RS10930	0.45	+0.7
2,419,156	-		LRK54_RS10930	0.45	-2.6
2,419,156	-		LRK54_RS10930	0.45	-2.0
2,419,156	-		LRK54_RS10930	0.45	+0.1
2,419,156	-		LRK54_RS10930	0.45	-1.6
2,419,156	-		LRK54_RS10930	0.45	-1.3
2,419,156	-		LRK54_RS10930	0.45	+0.7
2,419,156	-		LRK54_RS10930	0.45	-1.3
2,419,156	-		LRK54_RS10930	0.45	-1.9
2,419,452	+		LRK54_RS10930	0.76	-0.5
2,419,452	+		LRK54_RS10930	0.76	-3.2
2,419,452	+		LRK54_RS10930	0.76	-0.3
2,419,452	+		LRK54_RS10930	0.76	+0.7
2,419,452	+		LRK54_RS10930	0.76	-2.0
2,419,453	-		LRK54_RS10930	0.76	-2.4
2,419,458	+		LRK54_RS10930	0.76	+0.7
2,419,459	-		LRK54_RS10930	0.76	+0.7
2,419,459	-		LRK54_RS10930	0.76	-0.9
2,419,459	-		LRK54_RS10930	0.76	-1.3
2,419,459	-		LRK54_RS10930	0.76	-0.3
2,419,459	-		LRK54_RS10930	0.76	-1.3
2,419,459	-		LRK54_RS10930	0.76	-2.7
2,419,473	+		LRK54_RS10930	0.78	-0.9
2,419,473	+		LRK54_RS10930	0.78	-1.0
2,419,473	+		LRK54_RS10930	0.78	+0.1
2,419,473	+		LRK54_RS10930	0.78	-0.9
2,419,473	+		LRK54_RS10930	0.78	+0.7
2,419,473	+		LRK54_RS10930	0.78	-1.0
2,419,473	+		LRK54_RS10930	0.78	-1.7
2,419,473	+		LRK54_RS10930	0.78	-1.8
2,419,473	+		LRK54_RS10930	0.78	-2.3
2,419,474	-		LRK54_RS10930	0.78	-0.6
2,419,474	-		LRK54_RS10930	0.78	-2.3
2,419,474	-		LRK54_RS10930	0.78	+0.1
2,419,474	-		LRK54_RS10930	0.78	-0.3
2,419,474	-		LRK54_RS10930	0.78	-1.4
2,419,563	+		LRK54_RS10930	0.87	-1.3
2,419,563	+		LRK54_RS10930	0.87	-1.9
2,419,563	+		LRK54_RS10930	0.87	+2.3
2,419,563	+		LRK54_RS10930	0.87	-1.6
2,419,563	+		LRK54_RS10930	0.87	-3.3
2,419,563	+		LRK54_RS10930	0.87	-2.0
2,419,563	+		LRK54_RS10930	0.87	-1.3
2,419,563	+		LRK54_RS10930	0.87	-0.9
2,419,563	+		LRK54_RS10930	0.87	+0.1
2,419,563	+		LRK54_RS10930	0.87	-1.3
2,419,563	+		LRK54_RS10930	0.87	-1.4
2,419,563	+		LRK54_RS10930	0.87	-0.4
2,419,563	+		LRK54_RS10930	0.87	-1.9
2,419,563	+		LRK54_RS10930	0.87	-1.2
2,419,563	+		LRK54_RS10930	0.87	-0.3
2,419,564	-		LRK54_RS10930	0.87	-3.1
2,419,564	-		LRK54_RS10930	0.87	-3.6
2,419,564	-		LRK54_RS10930	0.87	+0.7
2,419,564	-		LRK54_RS10930	0.87	+0.3
2,419,564	-		LRK54_RS10930	0.87	-1.3
2,419,564	-		LRK54_RS10930	0.87	+0.7
2,419,564	-		LRK54_RS10930	0.87	-0.9
2,419,564	-		LRK54_RS10930	0.87	-2.9
2,419,564	-		LRK54_RS10930	0.87	-0.6
2,419,564	-		LRK54_RS10930	0.87	-1.9
2,419,564	-		LRK54_RS10930	0.87	-1.0
2,419,564	-		LRK54_RS10930	0.87	-1.3
2,419,564	-		LRK54_RS10930	0.87	-1.3
2,419,564	-		LRK54_RS10930	0.87	-0.6
2,419,661	+				+0.1