Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10660

Experiment: R2A with SpecU metal mix 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with SpecU metal mix 1 X
2,358,967	+		LRK54_RS10655	0.78	+0.3
2,358,967	+		LRK54_RS10655	0.78	-0.3
2,358,967	+		LRK54_RS10655	0.78	-0.6
2,358,967	+		LRK54_RS10655	0.78	-0.5
2,358,967	+		LRK54_RS10655	0.78	+0.2
2,358,967	+		LRK54_RS10655	0.78	+0.1
2,358,967	+		LRK54_RS10655	0.78	+2.2
2,358,967	+		LRK54_RS10655	0.78	-1.3
2,358,968	-		LRK54_RS10655	0.78	-1.8
2,358,968	-		LRK54_RS10655	0.78	-0.4
2,358,968	-		LRK54_RS10655	0.78	-0.2
2,358,968	-		LRK54_RS10655	0.78	+0.7
2,358,968	-		LRK54_RS10655	0.78	-0.8
2,358,968	-		LRK54_RS10655	0.78	+1.3
2,359,135	+		LRK54_RS10655	0.84	-0.6
2,359,136	-		LRK54_RS10655	0.84	+0.2
2,359,136	-		LRK54_RS10655	0.84	-2.7
2,359,136	-		LRK54_RS10655	0.84	-0.1
2,359,189	+		LRK54_RS10655	0.86	-0.5
2,359,189	+		LRK54_RS10655	0.86	+0.7
2,359,189	+		LRK54_RS10655	0.86	-0.4
2,359,189	+		LRK54_RS10655	0.86	-2.4
2,359,189	+		LRK54_RS10655	0.86	-0.6
2,359,189	+		LRK54_RS10655	0.86	+1.1
2,359,189	+		LRK54_RS10655	0.86	-0.8
2,359,189	+		LRK54_RS10655	0.86	-0.3
2,359,189	+		LRK54_RS10655	0.86	+0.4
2,359,189	+		LRK54_RS10655	0.86	-1.1
2,359,190	-		LRK54_RS10655	0.86	+0.5
2,359,190	-		LRK54_RS10655	0.86	-0.0
2,359,190	-		LRK54_RS10655	0.86	-1.8
2,359,190	-		LRK54_RS10655	0.86	+0.3
2,359,190	-		LRK54_RS10655	0.86	+0.7
2,359,190	-		LRK54_RS10655	0.86	-0.8
2,359,190	-		LRK54_RS10655	0.86	-1.4
2,359,190	-		LRK54_RS10655	0.86	-0.4
2,359,190	-		LRK54_RS10655	0.86	+0.2
2,359,190	-		LRK54_RS10655	0.86	-0.3
2,359,381	+				-0.0
2,359,381	+				-0.4
2,359,381	+				-0.0
2,359,381	+				-1.6
2,359,381	+				-0.8
2,359,382	-				-0.9
2,359,382	-				-1.1
2,359,382	-				-2.8
2,359,382	-				-1.4
2,359,382	-				+0.4
2,359,382	-				-2.1
2,359,382	-				+1.4
2,359,382	-				-1.8
2,359,382	-				-1.1
2,359,399	+				-1.1
2,359,399	+				-0.5
2,359,399	+				+0.3
2,359,399	+				+0.7
2,359,399	+				-0.8
2,359,399	+				-0.8
2,359,399	+				-0.7
2,359,399	+				+0.7
2,359,399	+				-0.3
2,359,399	+				-2.1
2,359,399	+				+0.5
2,359,399	+				-0.0
2,359,399	+				-0.5
2,359,399	+				-0.3
2,359,399	+				-1.3
2,359,399	+				+0.5
2,359,399	+				-2.2
2,359,399	+				-0.0
2,359,400	-				+0.4
2,359,400	-				-0.2
2,359,400	-				-2.6
2,359,400	-				-0.3
2,359,400	-				-0.3
2,359,400	-				-0.4
2,359,400	-				-0.6
2,359,400	-				-0.6
2,359,400	-				+1.7
2,359,400	-				+0.5
2,359,400	-				+1.6
2,359,400	-				-0.3
2,359,400	-				-0.3
2,359,400	-				-0.1
2,359,400	-				-0.7
2,359,400	-				+0.3
2,359,400	-				-0.9
2,359,668	+				+0.3
2,359,668	+				-0.1
2,359,669	-				+1.0
2,359,669	-				-0.8
2,359,669	-				-1.0
2,359,669	-				-0.4
2,360,035	+		LRK54_RS10660	0.75	-0.8
2,360,035	+		LRK54_RS10660	0.75	-2.1
2,360,036	-		LRK54_RS10660	0.75	-2.7
2,360,187	-				-0.8
2,360,442	+		LRK54_RS10665	0.14	-0.9
2,360,442	+		LRK54_RS10665	0.14	-1.7
2,360,442	+		LRK54_RS10665	0.14	-3.4
2,360,442	+		LRK54_RS10665	0.14	-1.4
2,360,442	+		LRK54_RS10665	0.14	+0.5
2,360,443	-		LRK54_RS10665	0.15	-1.3
2,360,443	-		LRK54_RS10665	0.15	+0.7
2,360,443	-		LRK54_RS10665	0.15	-0.5
2,360,443	-		LRK54_RS10665	0.15	-2.0
2,360,443	-		LRK54_RS10665	0.15	-1.9
2,360,443	-		LRK54_RS10665	0.15	-0.2
2,360,522	-		LRK54_RS10665	0.20	-2.6
2,360,598	+		LRK54_RS10665	0.26	-0.3
2,360,598	+		LRK54_RS10665	0.26	-1.3
2,360,598	+		LRK54_RS10665	0.26	-1.0
2,360,598	+		LRK54_RS10665	0.26	-1.8
2,360,598	+		LRK54_RS10665	0.26	-1.1
2,360,598	+		LRK54_RS10665	0.26	-1.9
2,360,598	+		LRK54_RS10665	0.26	-1.3
2,360,599	-		LRK54_RS10665	0.26	+0.7
2,360,599	-		LRK54_RS10665	0.26	-0.3
2,360,599	-		LRK54_RS10665	0.26	-0.3
2,360,599	-		LRK54_RS10665	0.26	-1.3
2,360,599	-		LRK54_RS10665	0.26	+0.7
2,360,599	-		LRK54_RS10665	0.26	+0.2
2,360,599	-		LRK54_RS10665	0.26	-1.3
2,360,599	-		LRK54_RS10665	0.26	-1.8
2,360,640	+		LRK54_RS10665	0.29	-0.3
2,360,640	+		LRK54_RS10665	0.29	-0.3
2,360,641	-		LRK54_RS10665	0.29	-0.0
2,360,718	+		LRK54_RS10665	0.34	-0.3
2,360,718	+		LRK54_RS10665	0.34	-2.2
2,360,718	+		LRK54_RS10665	0.34	+0.1
2,360,718	+		LRK54_RS10665	0.34	-2.1
2,360,718	+		LRK54_RS10665	0.34	-0.8
2,360,718	+		LRK54_RS10665	0.34	-1.4
2,360,719	-		LRK54_RS10665	0.34	-0.3
2,360,719	-		LRK54_RS10665	0.34	-0.8
2,360,719	-		LRK54_RS10665	0.34	-0.3
2,360,719	-		LRK54_RS10665	0.34	+1.3
2,360,719	-		LRK54_RS10665	0.34	-1.8
2,360,719	-		LRK54_RS10665	0.34	-0.6
2,360,719	-		LRK54_RS10665	0.34	-0.2
2,360,719	-		LRK54_RS10665	0.34	-1.2
2,360,745	+		LRK54_RS10665	0.36	-2.1
2,360,745	+		LRK54_RS10665	0.36	-0.8
2,360,745	+		LRK54_RS10665	0.36	-1.3
2,360,745	+		LRK54_RS10665	0.36	+0.2
2,360,745	+		LRK54_RS10665	0.36	+1.2
2,360,745	+		LRK54_RS10665	0.36	-1.4
2,360,745	+		LRK54_RS10665	0.36	-0.3
2,360,745	+		LRK54_RS10665	0.36	-2.3
2,360,745	+		LRK54_RS10665	0.36	+0.7
2,360,745	+		LRK54_RS10665	0.36	-1.3
2,360,745	+		LRK54_RS10665	0.36	-2.1
2,360,745	+		LRK54_RS10665	0.36	-1.6
2,360,746	-		LRK54_RS10665	0.36	+1.2
2,360,746	-		LRK54_RS10665	0.36	-1.3
2,360,746	-		LRK54_RS10665	0.36	-0.9
2,360,746	-		LRK54_RS10665	0.36	-1.4
2,360,746	-		LRK54_RS10665	0.36	-0.0
2,360,746	-		LRK54_RS10665	0.36	-0.7
2,360,781	+		LRK54_RS10665	0.39	+0.7
2,360,949	+		LRK54_RS10665	0.51	-0.8
2,360,949	+		LRK54_RS10665	0.51	-0.0
2,360,949	+		LRK54_RS10665	0.51	-1.7
2,360,949	+		LRK54_RS10665	0.51	-0.1
2,360,949	+		LRK54_RS10665	0.51	-0.0
2,360,949	+		LRK54_RS10665	0.51	+1.3
2,360,949	+		LRK54_RS10665	0.51	-0.5
2,360,950	-		LRK54_RS10665	0.51	-1.3
2,360,950	-		LRK54_RS10665	0.51	+3.1
2,360,950	-		LRK54_RS10665	0.51	-1.1
2,360,950	-		LRK54_RS10665	0.51	-0.8
2,361,093	+		LRK54_RS10665	0.61	-2.3
2,361,093	+		LRK54_RS10665	0.61	-1.6
2,361,093	+		LRK54_RS10665	0.61	-0.5
2,361,093	+		LRK54_RS10665	0.61	-0.4
2,361,093	+		LRK54_RS10665	0.61	+0.7
2,361,093	+		LRK54_RS10665	0.61	-1.5
2,361,093	+		LRK54_RS10665	0.61	-2.1
2,361,093	+		LRK54_RS10665	0.61	-1.6
2,361,094	-		LRK54_RS10665	0.61	-1.3
2,361,094	-		LRK54_RS10665	0.61	-0.8
2,361,094	-		LRK54_RS10665	0.61	+0.7
2,361,094	-		LRK54_RS10665	0.61	-0.3
2,361,094	-		LRK54_RS10665	0.61	-0.8
2,361,094	-		LRK54_RS10665	0.61	-0.8
2,361,094	-		LRK54_RS10665	0.61	-1.1
2,361,094	-		LRK54_RS10665	0.61	-0.8