Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07620

Experiment: R2A with SpecU metal mix 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with SpecU metal mix 1 X
1,641,477	-		LRK54_RS07615	0.69	-1.6
1,641,518	+		LRK54_RS07615	0.70	-2.0
1,641,518	+		LRK54_RS07615	0.70	-1.5
1,641,519	-		LRK54_RS07615	0.70	-1.0
1,641,581	+		LRK54_RS07615	0.72	+0.8
1,641,581	+		LRK54_RS07615	0.72	-1.9
1,641,581	+		LRK54_RS07615	0.72	-1.8
1,641,582	-		LRK54_RS07615	0.72	-1.2
1,641,582	-		LRK54_RS07615	0.72	-2.4
1,641,582	-		LRK54_RS07615	0.72	-1.5
1,641,582	-		LRK54_RS07615	0.72	-0.2
1,641,582	-		LRK54_RS07615	0.72	-1.3
1,641,582	-		LRK54_RS07615	0.72	-2.8
1,641,582	-		LRK54_RS07615	0.72	-1.0
1,641,582	-		LRK54_RS07615	0.72	-0.2
1,641,758	+		LRK54_RS07615	0.78	-1.5
1,641,758	+		LRK54_RS07615	0.78	-0.4
1,641,758	+		LRK54_RS07615	0.78	-1.2
1,641,758	+		LRK54_RS07615	0.78	-0.6
1,641,758	+		LRK54_RS07615	0.78	-1.9
1,641,758	+		LRK54_RS07615	0.78	+1.1
1,641,759	-		LRK54_RS07615	0.78	-0.8
1,641,759	-		LRK54_RS07615	0.78	-2.3
1,641,759	-		LRK54_RS07615	0.78	-1.5
1,641,759	-		LRK54_RS07615	0.78	-2.2
1,641,759	-		LRK54_RS07615	0.78	-2.1
1,641,759	-		LRK54_RS07615	0.78	+0.8
1,641,759	-		LRK54_RS07615	0.78	-2.8
1,641,767	+		LRK54_RS07615	0.78	-2.1
1,641,767	+		LRK54_RS07615	0.78	-1.2
1,641,767	+		LRK54_RS07615	0.78	-0.6
1,641,767	+		LRK54_RS07615	0.78	-2.1
1,641,767	+		LRK54_RS07615	0.78	-1.2
1,641,768	-		LRK54_RS07615	0.78	-2.2
1,641,768	-		LRK54_RS07615	0.78	-1.5
1,641,768	-		LRK54_RS07615	0.78	-0.2
1,641,768	-		LRK54_RS07615	0.78	-2.2
1,641,768	-		LRK54_RS07615	0.78	-0.8
1,641,768	-		LRK54_RS07615	0.78	-1.2
1,641,768	-		LRK54_RS07615	0.78	-1.8
1,641,768	-		LRK54_RS07615	0.78	-1.3
1,641,768	-		LRK54_RS07615	0.78	-1.6
1,641,959	+		LRK54_RS07615	0.85	-2.0
1,641,960	-		LRK54_RS07615	0.85	-4.1
1,641,960	-		LRK54_RS07615	0.85	-0.8
1,642,013	+		LRK54_RS07615	0.86	-1.5
1,642,013	+		LRK54_RS07615	0.86	-2.0
1,642,013	+		LRK54_RS07615	0.86	+0.8
1,642,013	+		LRK54_RS07615	0.86	-1.7
1,642,014	-		LRK54_RS07615	0.86	-0.6
1,642,014	-		LRK54_RS07615	0.86	-0.8
1,642,014	-		LRK54_RS07615	0.86	-0.2
1,642,014	-		LRK54_RS07615	0.86	-2.6
1,642,342	+				-1.3
1,642,344	-				-0.8
1,642,471	+				-1.9
1,642,472	-				-1.8
1,642,597	+		LRK54_RS07620	0.16	-2.1
1,642,597	+		LRK54_RS07620	0.16	-1.8
1,642,597	+		LRK54_RS07620	0.16	-1.2
1,642,597	+		LRK54_RS07620	0.16	-2.4
1,642,597	+		LRK54_RS07620	0.16	+0.4
1,642,597	+		LRK54_RS07620	0.16	-1.2
1,642,597	+		LRK54_RS07620	0.16	-2.8
1,642,597	+		LRK54_RS07620	0.16	-2.8
1,642,597	+		LRK54_RS07620	0.16	-2.6
1,642,598	-		LRK54_RS07620	0.16	-2.9
1,642,598	-		LRK54_RS07620	0.16	-2.0
1,642,598	-		LRK54_RS07620	0.16	-1.2
1,642,598	-		LRK54_RS07620	0.16	-1.0
1,642,598	-		LRK54_RS07620	0.16	-0.2
1,642,598	-		LRK54_RS07620	0.16	-1.8
1,642,598	-		LRK54_RS07620	0.16	-1.8
1,642,810	+		LRK54_RS07620	0.36	-0.8
1,642,810	+		LRK54_RS07620	0.36	-2.2
1,642,810	+		LRK54_RS07620	0.36	-1.1
1,642,810	+		LRK54_RS07620	0.36	-1.5
1,642,810	+		LRK54_RS07620	0.36	-1.5
1,642,811	-		LRK54_RS07620	0.36	-2.4
1,642,811	-		LRK54_RS07620	0.36	-2.0
1,642,811	-		LRK54_RS07620	0.36	-0.1
1,642,811	-		LRK54_RS07620	0.36	-1.8
1,642,811	-		LRK54_RS07620	0.36	+0.8
1,642,811	-		LRK54_RS07620	0.36	-1.7
1,642,811	-		LRK54_RS07620	0.36	-1.3
1,642,811	-		LRK54_RS07620	0.36	-0.2
1,642,811	-		LRK54_RS07620	0.36	-1.7
1,642,811	-		LRK54_RS07620	0.36	-0.8
1,643,170	+		LRK54_RS07620	0.70	-1.2
1,643,170	+		LRK54_RS07620	0.70	-2.8
1,643,802	+		LRK54_RS07625	0.23	-1.2
1,643,802	+		LRK54_RS07625	0.23	-1.4
1,643,802	+		LRK54_RS07625	0.23	-0.5
1,643,803	-		LRK54_RS07625	0.23	-2.5
1,643,904	+		LRK54_RS07625	0.30	-1.0
1,643,904	+		LRK54_RS07625	0.30	-0.4
1,643,904	+		LRK54_RS07625	0.30	-1.5
1,643,904	+		LRK54_RS07625	0.30	-0.2
1,643,905	-		LRK54_RS07625	0.30	-1.1
1,643,905	-		LRK54_RS07625	0.30	-2.0
1,643,905	-		LRK54_RS07625	0.30	+0.2
1,643,905	-		LRK54_RS07625	0.30	+0.3
1,643,905	-		LRK54_RS07625	0.30	-3.0
1,644,000	+		LRK54_RS07625	0.37	-2.2
1,644,000	+		LRK54_RS07625	0.37	-0.5
1,644,000	+		LRK54_RS07625	0.37	+1.2
1,644,000	+		LRK54_RS07625	0.37	-3.3
1,644,000	+		LRK54_RS07625	0.37	-0.9
1,644,000	+		LRK54_RS07625	0.37	+0.4
1,644,240	+		LRK54_RS07625	0.54	-1.0
1,644,240	+		LRK54_RS07625	0.54	+0.2
1,644,240	+		LRK54_RS07625	0.54	-0.8
1,644,240	+		LRK54_RS07625	0.54	-2.2
1,644,240	+		LRK54_RS07625	0.54	-1.6
1,644,240	+		LRK54_RS07625	0.54	-2.3
1,644,241	-		LRK54_RS07625	0.54	-2.8
1,644,241	-		LRK54_RS07625	0.54	-0.2
1,644,241	-		LRK54_RS07625	0.54	-1.5
1,644,276	+		LRK54_RS07625	0.56	-2.9
1,644,276	+		LRK54_RS07625	0.56	-1.5
1,644,276	+		LRK54_RS07625	0.56	-1.0
1,644,277	-		LRK54_RS07625	0.56	-1.5
1,644,277	-		LRK54_RS07625	0.56	-1.8
1,644,277	-		LRK54_RS07625	0.56	-1.5
1,644,277	-		LRK54_RS07625	0.56	-1.4
1,644,277	-		LRK54_RS07625	0.56	-1.1
1,644,277	-		LRK54_RS07625	0.56	-0.4
1,644,277	-		LRK54_RS07625	0.56	-0.2
1,644,277	-		LRK54_RS07625	0.56	+0.8
1,644,277	-		LRK54_RS07625	0.56	-0.8
1,644,277	-		LRK54_RS07625	0.56	-1.1
1,644,277	-		LRK54_RS07625	0.56	-2.2