Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS00705

Experiment: R2A with SpecU metal mix 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with SpecU metal mix 1 X
150,895	+		LRK54_RS00700	0.47	-0.7
150,896	-		LRK54_RS00700	0.47	+1.0
150,950	+		LRK54_RS00700	0.51	+1.1
150,950	+		LRK54_RS00700	0.51	+1.4
150,950	+		LRK54_RS00700	0.51	-0.3
150,951	-		LRK54_RS00700	0.51	+0.4
150,971	+		LRK54_RS00700	0.53	+0.0
150,971	+		LRK54_RS00700	0.53	-0.8
150,971	+		LRK54_RS00700	0.53	-0.6
150,971	+		LRK54_RS00700	0.53	-0.3
150,971	+		LRK54_RS00700	0.53	+1.3
150,971	+		LRK54_RS00700	0.53	+0.9
150,971	+		LRK54_RS00700	0.53	+0.5
150,971	+		LRK54_RS00700	0.53	+0.7
150,971	+		LRK54_RS00700	0.53	+0.6
150,971	+		LRK54_RS00700	0.53	-0.5
150,971	+		LRK54_RS00700	0.53	+0.4
150,971	+		LRK54_RS00700	0.53	+0.7
150,971	+		LRK54_RS00700	0.53	+0.4
150,971	+		LRK54_RS00700	0.53	-0.1
150,971	+		LRK54_RS00700	0.53	-0.3
150,971	+		LRK54_RS00700	0.53	-0.1
150,971	+		LRK54_RS00700	0.53	-0.1
150,971	+		LRK54_RS00700	0.53	+1.0
150,971	+		LRK54_RS00700	0.53	+0.7
150,971	+		LRK54_RS00700	0.53	-0.1
150,971	+		LRK54_RS00700	0.53	-1.8
150,971	+		LRK54_RS00700	0.53	-0.4
150,972	-		LRK54_RS00700	0.53	-0.9
150,972	-		LRK54_RS00700	0.53	-0.5
150,972	-		LRK54_RS00700	0.53	+0.0
150,972	-		LRK54_RS00700	0.53	+0.4
150,972	-		LRK54_RS00700	0.53	-1.9
150,972	-		LRK54_RS00700	0.53	-0.0
150,972	-		LRK54_RS00700	0.53	-0.3
150,972	-		LRK54_RS00700	0.53	-0.5
150,972	-		LRK54_RS00700	0.53	+0.7
150,972	-		LRK54_RS00700	0.53	-0.7
150,972	-		LRK54_RS00700	0.53	-0.5
150,972	-		LRK54_RS00700	0.53	+0.1
150,972	-		LRK54_RS00700	0.53	-0.8
150,972	-		LRK54_RS00700	0.53	-0.5
150,972	-		LRK54_RS00700	0.53	+0.3
150,972	-		LRK54_RS00700	0.53	+1.3
150,972	-		LRK54_RS00700	0.53	-0.1
151,115	+		LRK54_RS00700	0.64	+0.2
151,115	+		LRK54_RS00700	0.64	-0.6
151,115	+		LRK54_RS00700	0.64	-0.3
151,115	+		LRK54_RS00700	0.64	+0.2
151,115	+		LRK54_RS00700	0.64	+1.7
151,115	+		LRK54_RS00700	0.64	-0.4
151,115	+		LRK54_RS00700	0.64	-0.1
151,115	+		LRK54_RS00700	0.64	-0.8
151,116	-		LRK54_RS00700	0.64	+0.5
151,116	-		LRK54_RS00700	0.64	+0.9
151,116	-		LRK54_RS00700	0.64	-0.1
151,116	-		LRK54_RS00700	0.64	-1.8
151,226	-		LRK54_RS00700	0.72	-0.3
151,226	-		LRK54_RS00700	0.72	+0.2
151,592	+				+0.1
151,592	+				-1.3
151,592	+				-1.3
151,592	+				+0.3
151,592	+				+0.7
151,593	-				+0.1
151,593	-				-0.5
151,593	-				-0.5
151,675	-				+0.6
151,678	+				-0.2
151,678	+				+1.7
151,733	+				+0.0
151,733	+				-0.9
151,733	+				-0.8
151,733	+				-1.6
151,733	+				+0.1
151,733	+				+0.2
151,733	+				-0.8
151,733	+				-1.3
151,734	-				+0.6
151,734	-				+0.6
151,734	-				+0.7
151,734	-				+0.6
151,734	-				-0.7
151,734	-				-1.6
151,734	-				-0.4
151,734	-				-0.9
151,734	-				-0.6
151,734	-				+0.1
151,734	-				+0.7
151,734	-				-0.4
151,734	-				+0.9
151,734	-				+0.6
151,890	+		LRK54_RS00705	0.20	-0.5
151,890	+		LRK54_RS00705	0.20	-2.8
151,890	+		LRK54_RS00705	0.20	-2.5
151,891	-		LRK54_RS00705	0.20	-1.1
151,891	-		LRK54_RS00705	0.20	-0.1
151,891	-		LRK54_RS00705	0.20	+0.9
151,891	-		LRK54_RS00705	0.20	-2.3
151,947	+		LRK54_RS00705	0.30	-1.6
151,947	+		LRK54_RS00705	0.30	-2.8
151,947	+		LRK54_RS00705	0.30	-1.9
151,947	+		LRK54_RS00705	0.30	-1.0
151,947	+		LRK54_RS00705	0.30	-1.3
151,947	+		LRK54_RS00705	0.30	-1.3
151,947	+		LRK54_RS00705	0.30	-0.8
151,947	+		LRK54_RS00705	0.30	-3.2
151,947	+		LRK54_RS00705	0.30	-1.9
151,947	+		LRK54_RS00705	0.30	-1.8
151,947	+		LRK54_RS00705	0.30	-1.6
151,947	+		LRK54_RS00705	0.30	-2.9
151,948	-		LRK54_RS00705	0.30	+0.1
151,948	-		LRK54_RS00705	0.30	-1.9
151,948	-		LRK54_RS00705	0.30	-1.5
151,948	-		LRK54_RS00705	0.30	+0.3
151,948	-		LRK54_RS00705	0.30	-0.1
151,948	-		LRK54_RS00705	0.30	-0.9
151,948	-		LRK54_RS00705	0.30	-1.3
151,948	-		LRK54_RS00705	0.30	+0.7
151,948	-		LRK54_RS00705	0.30	-2.0
151,948	-		LRK54_RS00705	0.30	-0.9
151,948	-		LRK54_RS00705	0.30	-0.5
151,948	-		LRK54_RS00705	0.30	-1.0
151,948	-		LRK54_RS00705	0.30	-1.8
151,980	+		LRK54_RS00705	0.36	-2.8
151,980	+		LRK54_RS00705	0.36	-0.9
151,980	+		LRK54_RS00705	0.36	-1.9
151,980	+		LRK54_RS00705	0.36	-0.3
151,980	+		LRK54_RS00705	0.36	-0.7
151,981	-		LRK54_RS00705	0.36	-0.3
151,981	-		LRK54_RS00705	0.36	-0.3
151,981	-		LRK54_RS00705	0.36	-1.3
152,055	+		LRK54_RS00705	0.49	-1.9
152,055	+		LRK54_RS00705	0.49	-1.9
152,055	+		LRK54_RS00705	0.49	-1.1
152,055	+		LRK54_RS00705	0.49	-1.3
152,055	+		LRK54_RS00705	0.49	-1.8
152,055	+		LRK54_RS00705	0.49	-1.6
152,055	+		LRK54_RS00705	0.49	-1.0
152,055	+		LRK54_RS00705	0.49	-0.3
152,055	+		LRK54_RS00705	0.49	-0.6
152,055	+		LRK54_RS00705	0.49	-1.6
152,055	+		LRK54_RS00705	0.49	-0.0
152,055	+		LRK54_RS00705	0.49	-3.8
152,055	+		LRK54_RS00705	0.49	-1.9
152,055	+		LRK54_RS00705	0.49	-1.3
152,056	-		LRK54_RS00705	0.50	+1.7
152,056	-		LRK54_RS00705	0.50	+1.0
152,056	-		LRK54_RS00705	0.50	-2.5
152,056	-		LRK54_RS00705	0.50	+0.4
152,056	-		LRK54_RS00705	0.50	-0.0
152,056	-		LRK54_RS00705	0.50	-1.9
152,056	-		LRK54_RS00705	0.50	-0.3
152,056	-		LRK54_RS00705	0.50	-2.6
152,244	+		LRK54_RS00705	0.83	-0.6
152,244	+		LRK54_RS00705	0.83	+0.1
152,244	+		LRK54_RS00705	0.83	-0.5
152,244	+		LRK54_RS00705	0.83	-2.5
152,244	+		LRK54_RS00705	0.83	+0.3
152,244	+		LRK54_RS00705	0.83	+0.1
152,244	+		LRK54_RS00705	0.83	+0.1
152,244	+		LRK54_RS00705	0.83	-0.9
152,245	-		LRK54_RS00705	0.83	-1.9
152,245	-		LRK54_RS00705	0.83	-0.9
152,245	-		LRK54_RS00705	0.83	-1.8
152,245	-		LRK54_RS00705	0.83	-1.3
152,245	-		LRK54_RS00705	0.83	-0.9
152,245	-		LRK54_RS00705	0.83	-1.8
152,245	-		LRK54_RS00705	0.83	-1.8
152,245	-		LRK54_RS00705	0.83	-2.5
152,245	-		LRK54_RS00705	0.83	-0.6
152,337	+				-0.8
152,337	+				+1.4
152,337	+				-0.9
152,337	+				-0.2
152,337	+				+0.1
152,337	+				-1.6
152,337	+				-1.0
152,337	+				+0.3
152,337	+				+0.1
152,337	+				-1.3
152,337	+				+0.0
152,337	+				-0.5
152,337	+				-1.0
152,337	+				+1.0
152,337	+				+3.5
152,337	+				-0.3
152,337	+				+0.3
152,337	+				-0.1
152,337	+				-1.6
152,337	+				-0.1
152,337	+				+0.7
152,337	+				+1.8
152,337	+				+0.6
152,337	+				+0.7
152,337	+				-1.3
152,337	+				-1.5
152,337	+				-1.5
152,337	+				-1.1
152,337	+				-0.2
152,337	+				-0.3
152,337	+				+0.2
152,337	+				-1.0
152,337	+				-0.2
152,337	+				+0.0
152,338	-				+0.0
152,338	-				-0.1
152,338	-				+0.1
152,338	-				+0.7
152,338	-				+1.9
152,338	-				-1.2
152,338	-				+0.2
152,338	-				-0.0
152,338	-				+0.9
152,338	-				+0.3
152,338	-				-0.1
152,338	-				+0.2
152,338	-				-0.4
152,338	-				-1.6
152,338	-				+0.4
152,338	-				+0.0
152,338	-				-0.7
152,338	-				-0.3
152,338	-				-0.1
152,338	-				-0.1
152,338	-				+0.1
152,338	-				+0.1
152,338	-				-3.0
152,338	-				+0.7
152,338	-				+0.0
152,338	-				+0.3
152,338	-				-0.8
152,338	-				+1.7
152,338	-				-0.3
152,338	-				+0.7
152,338	-				+0.0
152,338	-				+1.1
152,338	-				-0.3
152,338	-				-1.6
152,508	+				-0.3
152,508	+				+0.1
152,508	+				+0.6
152,508	+				+0.3
152,508	+				+0.8
152,508	+				+1.0
152,508	+				-0.7
152,508	+				+1.1
152,508	+				+0.1
152,508	+				-1.2
152,508	+				+0.7
152,508	+				+1.7
152,508	+				-2.1
152,508	+				-0.1
152,509	-				+0.6
152,509	-				-0.6
152,509	-				+1.7
152,509	-				-0.1
152,509	-				-0.9
152,509	-				-0.3
152,509	-				+1.1
152,509	-				+1.0
152,509	-				-1.1
152,509	-				+0.4
152,836	+		LRK54_RS00710	0.23	+1.4
152,836	+		LRK54_RS00710	0.23	-0.3
152,836	+		LRK54_RS00710	0.23	+2.3
152,836	+		LRK54_RS00710	0.23	-0.1
152,836	+		LRK54_RS00710	0.23	+0.7
152,836	+		LRK54_RS00710	0.23	+0.1
152,836	+		LRK54_RS00710	0.23	-0.5
152,836	+		LRK54_RS00710	0.23	-0.1
152,837	-		LRK54_RS00710	0.23	-0.5
152,837	-		LRK54_RS00710	0.23	-0.1
152,837	-		LRK54_RS00710	0.23	-1.3
152,837	-		LRK54_RS00710	0.23	+0.2
152,837	-		LRK54_RS00710	0.23	-0.9
152,837	-		LRK54_RS00710	0.23	-0.9
152,837	-		LRK54_RS00710	0.23	-0.2
152,837	-		LRK54_RS00710	0.23	-0.4
152,853	+		LRK54_RS00710	0.24	-1.3
152,853	+		LRK54_RS00710	0.24	-0.5
152,853	+		LRK54_RS00710	0.24	-1.4
152,853	+		LRK54_RS00710	0.24	-0.5
152,853	+		LRK54_RS00710	0.24	+0.3
152,853	+		LRK54_RS00710	0.24	-0.1
152,853	+		LRK54_RS00710	0.24	-0.9
152,853	+		LRK54_RS00710	0.24	+0.4
152,853	+		LRK54_RS00710	0.24	-0.1
152,853	+		LRK54_RS00710	0.24	-0.4
152,853	+		LRK54_RS00710	0.24	-0.8
152,853	+		LRK54_RS00710	0.24	-1.3
152,853	+		LRK54_RS00710	0.24	-1.9
152,854	-		LRK54_RS00710	0.24	+0.3
152,854	-		LRK54_RS00710	0.24	-0.3
152,854	-		LRK54_RS00710	0.24	-0.4
152,854	-		LRK54_RS00710	0.24	+0.4
152,854	-		LRK54_RS00710	0.24	+0.7
152,854	-		LRK54_RS00710	0.24	+1.7
152,854	-		LRK54_RS00710	0.24	-0.6
152,854	-		LRK54_RS00710	0.24	+1.5
152,854	-		LRK54_RS00710	0.24	+1.4
152,854	-		LRK54_RS00710	0.24	+0.3
152,854	-		LRK54_RS00710	0.24	+0.0
152,854	-		LRK54_RS00710	0.24	-0.2
152,958	+		LRK54_RS00710	0.30	-1.1
152,958	+		LRK54_RS00710	0.30	-1.5
152,958	+		LRK54_RS00710	0.30	-1.3
152,958	+		LRK54_RS00710	0.30	-1.1
152,958	+		LRK54_RS00710	0.30	-0.9
152,959	-		LRK54_RS00710	0.30	+0.4
152,959	-		LRK54_RS00710	0.30	+0.1
153,006	+		LRK54_RS00710	0.33	-0.2
153,006	+		LRK54_RS00710	0.33	-1.3
153,006	+		LRK54_RS00710	0.33	-0.8
153,007	-		LRK54_RS00710	0.33	-1.3
153,007	-		LRK54_RS00710	0.33	+2.0
153,007	-		LRK54_RS00710	0.33	-0.3
153,007	-		LRK54_RS00710	0.33	+0.6
153,007	-		LRK54_RS00710	0.33	-0.9
153,171	+		LRK54_RS00710	0.43	-0.9
153,171	+		LRK54_RS00710	0.43	-0.3
153,171	+		LRK54_RS00710	0.43	-0.4
153,171	+		LRK54_RS00710	0.43	+1.7
153,171	+		LRK54_RS00710	0.43	-0.6
153,171	+		LRK54_RS00710	0.43	-1.0
153,171	+		LRK54_RS00710	0.43	+0.2
153,172	-		LRK54_RS00710	0.43	-2.5
153,172	-		LRK54_RS00710	0.43	-0.4
153,172	-		LRK54_RS00710	0.43	+0.2
153,172	-		LRK54_RS00710	0.43	-0.3
153,172	-		LRK54_RS00710	0.43	-0.1
153,172	-		LRK54_RS00710	0.43	+1.0
153,270	+		LRK54_RS00710	0.50	-0.4
153,270	+		LRK54_RS00710	0.50	-0.1
153,270	+		LRK54_RS00710	0.50	-3.1
153,270	+		LRK54_RS00710	0.50	+1.0
153,271	-		LRK54_RS00710	0.50	-0.4
153,271	-		LRK54_RS00710	0.50	+0.3
153,271	-		LRK54_RS00710	0.50	-1.2
153,271	-		LRK54_RS00710	0.50	+0.0
153,271	-		LRK54_RS00710	0.50	-0.8
153,271	-		LRK54_RS00710	0.50	+0.7
153,321	+		LRK54_RS00710	0.53	-0.4
153,321	+		LRK54_RS00710	0.53	-0.2
153,321	+		LRK54_RS00710	0.53	+0.7
153,321	+		LRK54_RS00710	0.53	+0.0
153,321	+		LRK54_RS00710	0.53	+0.2
153,321	+		LRK54_RS00710	0.53	+0.7
153,321	+		LRK54_RS00710	0.53	-0.5
153,321	+		LRK54_RS00710	0.53	-1.7
153,321	+		LRK54_RS00710	0.53	+0.1
153,322	-		LRK54_RS00710	0.53	+1.2
153,322	-		LRK54_RS00710	0.53	+1.3
153,322	-		LRK54_RS00710	0.53	+0.3
153,322	-		LRK54_RS00710	0.53	-0.2
153,322	-		LRK54_RS00710	0.53	-0.1
153,322	-		LRK54_RS00710	0.53	-0.1
153,322	-		LRK54_RS00710	0.53	-0.2
153,322	-		LRK54_RS00710	0.53	-0.3
153,322	-		LRK54_RS00710	0.53	+2.0
153,322	-		LRK54_RS00710	0.53	-0.6
153,322	-		LRK54_RS00710	0.53	-1.3
153,322	-		LRK54_RS00710	0.53	-0.7