Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS00690

Experiment: R2A with SpecU metal mix 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with SpecU metal mix 1 X
147,094	+				-0.0
147,094	+				-2.1
147,094	+				-0.9
147,094	+				+0.3
147,094	+				+0.7
147,094	+				+1.7
147,094	+				+0.1
147,094	+				+0.1
147,094	+				+0.3
147,094	+				-0.2
147,094	+				-1.6
147,094	+				-0.5
147,094	+				+0.2
147,094	+				+0.1
147,094	+				+0.7
147,094	+				-1.3
147,094	+				-1.9
147,094	+				+0.8
147,094	+				+0.4
147,094	+				-1.3
147,094	+				+0.7
147,094	+				+0.8
147,094	+				+0.8
147,094	+				+0.2
147,094	+				+0.5
147,095	-				+0.7
147,095	-				-1.6
147,095	-				+1.5
147,095	-				-0.3
147,095	-				+0.3
147,095	-				-0.6
147,095	-				+0.6
147,095	-				-0.2
147,095	-				+1.0
147,095	-				-0.3
147,095	-				-0.5
147,095	-				+0.2
147,095	-				-0.4
147,095	-				+0.5
147,095	-				-1.2
147,095	-				+0.7
147,095	-				+0.3
147,095	-				-0.4
147,095	-				+0.3
147,095	-				+1.5
147,095	-				-0.9
147,095	-				-0.3
147,095	-				-0.2
147,095	-				+0.4
147,095	-				+0.3
147,095	-				+1.5
147,095	-				+0.1
147,095	-				+0.2
147,095	-				+0.7
147,095	-				-0.3
147,134	+				+0.2
147,135	-				+1.2
147,193	+		LRK54_RS00685	0.21	-0.3
147,194	-		LRK54_RS00685	0.21	-0.2
147,194	-		LRK54_RS00685	0.21	-0.5
147,194	-		LRK54_RS00685	0.21	-2.3
147,399	+		LRK54_RS00685	0.64	+0.3
147,399	+		LRK54_RS00685	0.64	-0.5
147,399	+		LRK54_RS00685	0.64	+0.0
147,399	+		LRK54_RS00685	0.64	+2.3
147,399	+		LRK54_RS00685	0.64	+0.1
147,399	+		LRK54_RS00685	0.64	+1.7
147,399	+		LRK54_RS00685	0.64	-1.5
147,399	+		LRK54_RS00685	0.64	-0.6
147,400	-		LRK54_RS00685	0.64	+2.3
147,400	-		LRK54_RS00685	0.64	+0.1
147,400	-		LRK54_RS00685	0.64	+0.4
147,400	-		LRK54_RS00685	0.64	-1.3
147,400	-		LRK54_RS00685	0.64	+0.7
147,400	-		LRK54_RS00685	0.64	-0.9
147,400	-		LRK54_RS00685	0.64	-0.3
147,400	-		LRK54_RS00685	0.64	+0.1
147,400	-		LRK54_RS00685	0.64	+0.7
147,404	+		LRK54_RS00685	0.65	+2.6
147,405	-		LRK54_RS00685	0.65	-1.2
147,405	-		LRK54_RS00685	0.65	+0.0
147,439	+		LRK54_RS00685	0.72	+0.1
147,439	+		LRK54_RS00685	0.72	+0.2
147,439	+		LRK54_RS00685	0.72	+1.5
147,439	+		LRK54_RS00685	0.72	-1.3
147,439	+		LRK54_RS00685	0.72	-0.5
147,439	+		LRK54_RS00685	0.72	+1.3
147,439	+		LRK54_RS00685	0.72	+0.5
147,439	+		LRK54_RS00685	0.72	+1.7
147,439	+		LRK54_RS00685	0.72	+2.3
147,439	+		LRK54_RS00685	0.72	+0.1
147,439	+		LRK54_RS00685	0.72	-1.2
147,439	+		LRK54_RS00685	0.72	+0.4
147,439	+		LRK54_RS00685	0.72	-0.3
147,439	+		LRK54_RS00685	0.72	+0.4
147,440	-		LRK54_RS00685	0.72	+1.0
147,440	-		LRK54_RS00685	0.72	+0.6
147,440	-		LRK54_RS00685	0.72	+0.2
147,440	-		LRK54_RS00685	0.72	+1.7
147,440	-		LRK54_RS00685	0.72	+0.7
147,440	-		LRK54_RS00685	0.72	+0.3
147,440	-		LRK54_RS00685	0.72	-0.1
147,440	-		LRK54_RS00685	0.72	-2.0
147,440	-		LRK54_RS00685	0.72	+0.5
147,508	+		LRK54_RS00685	0.86	+1.0
147,508	+		LRK54_RS00685	0.86	-0.3
147,508	+		LRK54_RS00685	0.86	+1.7
147,508	+		LRK54_RS00685	0.86	+1.0
147,508	+		LRK54_RS00685	0.86	-0.6
147,508	+		LRK54_RS00685	0.86	+0.3
147,508	+		LRK54_RS00685	0.86	+0.4
147,508	+		LRK54_RS00685	0.86	+1.5
147,508	+		LRK54_RS00685	0.86	+0.7
147,509	-		LRK54_RS00685	0.86	+0.3
147,509	-		LRK54_RS00685	0.86	-0.3
147,509	-		LRK54_RS00685	0.86	+0.2
147,509	-		LRK54_RS00685	0.86	+0.5
147,509	-		LRK54_RS00685	0.86	-0.1
147,509	-		LRK54_RS00685	0.86	+0.7
147,509	-		LRK54_RS00685	0.86	+1.7
147,630	+				-2.2
147,630	+				-0.3
147,673	+				-0.9
147,673	+				-0.2
147,673	+				+0.7
147,673	+				-0.4
147,674	-				-1.3
147,674	-				-0.2
147,799	+				-0.1
147,799	+				-2.4
147,799	+				-1.3
147,799	+				-0.7
147,799	+				+0.5
147,799	+				-0.8
147,799	+				+0.2
147,799	+				+0.6
147,799	+				-0.6
147,799	+				-0.6
147,799	+				+0.7
147,799	+				-0.6
147,799	+				-1.2
147,799	+				+0.2
147,799	+				-0.9
147,799	+				-2.1
147,799	+				-0.4
147,799	+				-0.7
147,799	+				+0.1
147,799	+				-0.0
147,799	+				-3.2
147,799	+				+0.1
147,799	+				-0.0
147,799	+				+1.7
147,799	+				-1.1
147,799	+				+0.9
147,799	+				-0.9
147,799	+				-0.1
147,799	+				+0.1
147,799	+				+0.6
147,799	+				+1.5
147,799	+				+0.5
147,799	+				-0.6
147,799	+				-0.6
147,799	+				-0.3
147,799	+				-0.4
147,799	+				-1.1
147,799	+				-1.1
147,799	+				+0.7
147,799	+				-1.3
147,799	+				+0.5
147,799	+				-0.5
147,799	+				+0.4
147,799	+				-1.5
147,799	+				-0.4
147,799	+				-0.0
147,799	+				+1.4
147,799	+				-0.3
147,800	-				+1.0
147,800	-				+1.0
147,800	-				-0.5
147,800	-				-0.0
147,800	-				-1.3
147,800	-				-0.4
147,800	-				-1.0
147,800	-				+0.1
147,800	-				+1.1
147,800	-				+0.3
147,800	-				-0.1
147,800	-				-0.1
147,800	-				+1.0
147,800	-				+0.1
147,800	-				-0.2
147,800	-				+0.5
147,800	-				-2.0
147,800	-				+0.2
147,800	-				+1.1
147,800	-				+1.0
147,800	-				+0.7
147,800	-				-0.0
147,800	-				+0.4
147,800	-				-0.3
147,800	-				+0.7
147,800	-				+1.3
147,800	-				+2.3
147,800	-				+0.5
147,800	-				+0.8
147,800	-				+1.1
147,800	-				-0.8
147,800	-				+0.2
147,800	-				+0.2
147,800	-				-0.3
147,800	-				-1.3
147,800	-				+0.2
147,800	-				-0.9
147,800	-				+1.7
147,800	-				+0.4
147,800	-				+0.1
147,800	-				+0.5
147,800	-				+1.4
147,800	-				+1.3
147,800	-				+0.8
147,800	-				-0.0
147,800	-				+1.9
147,800	-				+0.1
147,800	-				-0.3
147,808	+				-0.6
147,820	+				-0.8
147,820	+				-0.0
147,820	+				+1.3
147,820	+				-1.5
147,821	-				-1.4
147,821	-				-1.5
147,821	-				-0.9
147,821	-				+0.7
147,821	-				+0.8
147,821	-				-0.7
147,939	-				+0.7
147,939	-				+0.0
147,978	+				-0.3
147,978	+				-1.6
147,978	+				-1.2
147,978	+				-1.8
147,978	+				-1.7
147,978	+				-1.1
147,978	+				-1.3
147,978	+				-3.6
147,978	+				-2.0
147,979	-				-1.9
147,979	-				-0.4
147,979	-				-2.1
147,979	-				-1.6
147,979	-				+0.1
147,979	-				-2.1
147,979	-				-1.6
147,979	-				-0.3
147,979	-				-2.3
147,979	-				-1.3
147,979	-				-0.3
147,979	-				-0.8
147,979	-				-1.9
147,979	-				-1.6
148,002	+				-1.3
148,002	+				+0.1
148,002	+				-0.3
148,002	+				-1.3
148,002	+				+2.3
148,002	+				-2.3
148,002	+				-1.5
148,002	+				-2.5
148,002	+				-2.1
148,002	+				-1.0
148,003	-				-0.9
148,003	-				-0.6
148,003	-				-1.5
148,003	-				-2.8
148,003	-				-1.6
148,003	-				+0.7
148,003	-				-1.6
148,003	-				-2.3
148,003	-				-3.7
148,128	+		LRK54_RS00690	0.15	-1.9
148,128	+		LRK54_RS00690	0.15	-0.3
148,128	+		LRK54_RS00690	0.15	-0.3
148,291	+		LRK54_RS00690	0.29	+0.1
148,291	+		LRK54_RS00690	0.29	-0.3
148,291	+		LRK54_RS00690	0.29	-2.8
148,291	+		LRK54_RS00690	0.29	-2.8
148,291	+		LRK54_RS00690	0.29	-1.3
148,291	+		LRK54_RS00690	0.29	-2.1
148,291	+		LRK54_RS00690	0.29	-0.9
148,292	-		LRK54_RS00690	0.29	-1.5
148,292	-		LRK54_RS00690	0.29	-1.3
148,292	-		LRK54_RS00690	0.29	-1.5
148,292	-		LRK54_RS00690	0.29	-0.5
148,292	-		LRK54_RS00690	0.29	+0.7
148,292	-		LRK54_RS00690	0.29	+0.7
148,293	+		LRK54_RS00690	0.29	-1.8
148,293	+		LRK54_RS00690	0.29	-2.5
148,293	+		LRK54_RS00690	0.29	+0.7
148,293	+		LRK54_RS00690	0.29	-0.3
148,293	+		LRK54_RS00690	0.29	-2.8
148,293	+		LRK54_RS00690	0.29	-1.3
148,293	+		LRK54_RS00690	0.29	-1.9
148,293	+		LRK54_RS00690	0.29	-1.1
148,293	+		LRK54_RS00690	0.29	-1.6
148,293	+		LRK54_RS00690	0.29	-2.3
148,293	+		LRK54_RS00690	0.29	-1.7
148,293	+		LRK54_RS00690	0.29	+0.7
148,293	+		LRK54_RS00690	0.29	-1.1
148,293	+		LRK54_RS00690	0.29	-1.4
148,293	+		LRK54_RS00690	0.29	-0.3
148,293	+		LRK54_RS00690	0.29	-2.3
148,293	+		LRK54_RS00690	0.29	+0.1
148,293	+		LRK54_RS00690	0.29	-2.1
148,293	+		LRK54_RS00690	0.29	-1.6
148,293	+		LRK54_RS00690	0.29	-0.3
148,293	+		LRK54_RS00690	0.29	-0.9
148,294	-		LRK54_RS00690	0.29	-0.6
148,294	-		LRK54_RS00690	0.29	-1.3
148,294	-		LRK54_RS00690	0.29	-1.8
148,294	-		LRK54_RS00690	0.29	-1.9
148,294	-		LRK54_RS00690	0.29	-3.0
148,294	-		LRK54_RS00690	0.29	+0.1
148,294	-		LRK54_RS00690	0.29	+0.7
148,294	-		LRK54_RS00690	0.29	-0.3
148,294	-		LRK54_RS00690	0.29	+1.0
148,294	-		LRK54_RS00690	0.29	+0.1
148,294	-		LRK54_RS00690	0.29	-1.9
148,294	-		LRK54_RS00690	0.29	-0.3
148,294	-		LRK54_RS00690	0.29	+0.7
148,294	-		LRK54_RS00690	0.29	-1.3
148,294	-		LRK54_RS00690	0.29	+0.7
148,294	-		LRK54_RS00690	0.29	-0.9
148,294	-		LRK54_RS00690	0.29	-0.3
148,294	-		LRK54_RS00690	0.29	-1.5
148,294	-		LRK54_RS00690	0.29	-2.1
148,464	+		LRK54_RS00690	0.44	-1.3
148,464	+		LRK54_RS00690	0.44	+1.7
148,464	+		LRK54_RS00690	0.44	-1.3
148,464	+		LRK54_RS00690	0.44	-1.3
148,464	+		LRK54_RS00690	0.44	-0.3
148,464	+		LRK54_RS00690	0.44	-0.3
148,464	+		LRK54_RS00690	0.44	-0.7
148,464	+		LRK54_RS00690	0.44	-0.9
148,464	+		LRK54_RS00690	0.44	+0.1
148,464	+		LRK54_RS00690	0.44	-0.5
148,464	+		LRK54_RS00690	0.44	-0.9
148,465	-		LRK54_RS00690	0.44	+0.7
148,465	-		LRK54_RS00690	0.44	-1.6
148,465	-		LRK54_RS00690	0.44	-2.8
148,465	-		LRK54_RS00690	0.44	-1.7
148,465	-		LRK54_RS00690	0.44	-1.6
148,465	-		LRK54_RS00690	0.44	-0.3
148,465	-		LRK54_RS00690	0.44	-1.3
148,465	-		LRK54_RS00690	0.44	-0.3
148,465	-		LRK54_RS00690	0.44	-1.6
148,465	-		LRK54_RS00690	0.44	-0.3
148,465	-		LRK54_RS00690	0.44	-1.3
148,465	-		LRK54_RS00690	0.44	-0.3
148,533	+		LRK54_RS00690	0.50	-0.9
148,533	+		LRK54_RS00690	0.50	-0.9
148,534	-		LRK54_RS00690	0.50	+0.6
148,671	+		LRK54_RS00690	0.62	-0.3
148,671	+		LRK54_RS00690	0.62	-1.0
148,672	-		LRK54_RS00690	0.62	-3.5
148,672	-		LRK54_RS00690	0.62	-0.6
148,672	-		LRK54_RS00690	0.62	-0.5
148,677	+		LRK54_RS00690	0.63	-0.9
148,677	+		LRK54_RS00690	0.63	-2.4
148,677	+		LRK54_RS00690	0.63	-1.9
148,677	+		LRK54_RS00690	0.63	-0.3
148,677	+		LRK54_RS00690	0.63	-2.5
148,677	+		LRK54_RS00690	0.63	-2.3
148,677	+		LRK54_RS00690	0.63	-2.5
148,677	+		LRK54_RS00690	0.63	-0.9
148,677	+		LRK54_RS00690	0.63	-0.9
148,677	+		LRK54_RS00690	0.63	-2.1
148,677	+		LRK54_RS00690	0.63	-1.9
148,677	+		LRK54_RS00690	0.63	-1.9
148,678	-		LRK54_RS00690	0.63	-1.3
148,678	-		LRK54_RS00690	0.63	-1.3
148,678	-		LRK54_RS00690	0.63	+0.5
148,678	-		LRK54_RS00690	0.63	-1.3
148,678	-		LRK54_RS00690	0.63	+0.7
148,678	-		LRK54_RS00690	0.63	-3.2
148,678	-		LRK54_RS00690	0.63	-0.9
148,887	+		LRK54_RS00690	0.81	-1.1
148,887	+		LRK54_RS00690	0.81	-1.6
148,887	+		LRK54_RS00690	0.81	+0.7
148,887	+		LRK54_RS00690	0.81	+0.7
148,887	+		LRK54_RS00690	0.81	+2.3
148,887	+				+0.7
148,887	+		LRK54_RS00690	0.81	-1.3
148,887	+		LRK54_RS00690	0.81	-2.5
148,887	+		LRK54_RS00690	0.81	-3.1
148,887	+		LRK54_RS00690	0.81	-2.1
148,887	+		LRK54_RS00690	0.81	-0.7
148,887	+		LRK54_RS00690	0.81	-2.3
148,887	+		LRK54_RS00690	0.81	+0.7
148,887	+		LRK54_RS00690	0.81	-0.3
148,887	+		LRK54_RS00690	0.81	+0.7
148,888	-		LRK54_RS00690	0.81	-1.3
148,888	-		LRK54_RS00690	0.81	-2.0
148,888	-		LRK54_RS00690	0.81	+0.3
148,888	-		LRK54_RS00690	0.81	-0.3
148,888	-		LRK54_RS00690	0.81	-0.9
148,888	-		LRK54_RS00690	0.81	-1.3
148,888	-		LRK54_RS00690	0.81	-0.9
148,888	-		LRK54_RS00690	0.81	-1.3
148,888	-		LRK54_RS00690	0.81	-0.9
148,888	-		LRK54_RS00690	0.81	+0.7
148,888	-		LRK54_RS00690	0.81	-0.0
148,888	-		LRK54_RS00690	0.81	+2.7
148,888	-		LRK54_RS00690	0.81	-0.9
148,888	-		LRK54_RS00690	0.81	+2.3
148,888	-		LRK54_RS00690	0.81	-1.3
148,888	-		LRK54_RS00690	0.81	+0.7
148,888	-		LRK54_RS00690	0.81	+0.1
148,888	-		LRK54_RS00690	0.81	-0.4
148,888	-		LRK54_RS00690	0.81	-1.9
148,888	-		LRK54_RS00690	0.81	-0.3
148,888	-		LRK54_RS00690	0.81	-0.4
148,888	-		LRK54_RS00690	0.81	-0.3
148,888	-		LRK54_RS00690	0.81	-0.2
148,888	-		LRK54_RS00690	0.81	-2.5
148,935	+		LRK54_RS00690	0.85	-0.3
148,935	+		LRK54_RS00690	0.85	-0.3
148,935	+		LRK54_RS00690	0.85	+0.7
148,935	+		LRK54_RS00690	0.85	-0.9
148,935	+		LRK54_RS00690	0.85	-3.0
148,935	+		LRK54_RS00690	0.85	-0.3
148,935	+		LRK54_RS00690	0.85	+0.7
148,936	-		LRK54_RS00690	0.86	-1.0
148,936	-		LRK54_RS00690	0.86	-2.0
148,983	+		LRK54_RS00690	0.90	-1.6
148,983	+		LRK54_RS00690	0.90	-1.6
148,984	-		LRK54_RS00690	0.90	-1.6
149,023	+				-0.3
149,023	+				+0.7
149,024	-				+0.4
149,024	-				-1.3
149,024	-				-1.9
149,024	-				-2.1
149,024	-				-0.5
149,024	-				-0.9
149,216	+				+1.0
149,217	-				-1.2
149,217	-				-0.3
149,270	+				-1.6
149,270	+				-0.3
149,294	+				-0.3
149,294	+				-1.6
149,294	+				-0.6
149,363	+		LRK54_RS00695	0.15	-1.9
149,363	+		LRK54_RS00695	0.15	-0.0
149,364	-		LRK54_RS00695	0.15	-2.3
149,411	+		LRK54_RS00695	0.20	-1.6
149,411	+		LRK54_RS00695	0.20	-0.3
149,411	+		LRK54_RS00695	0.20	-2.3
149,411	+		LRK54_RS00695	0.20	-2.1
149,412	-		LRK54_RS00695	0.21	+2.3
149,528	+		LRK54_RS00695	0.34	-2.9
149,528	+		LRK54_RS00695	0.34	-0.0
149,528	+		LRK54_RS00695	0.34	-0.9
149,528	+		LRK54_RS00695	0.34	+0.1
149,585	+		LRK54_RS00695	0.40	-1.0
149,585	+		LRK54_RS00695	0.40	+0.1
149,585	+		LRK54_RS00695	0.40	-0.6
149,585	+		LRK54_RS00695	0.40	+0.7
149,586	-		LRK54_RS00695	0.40	-1.3
149,984	+		LRK54_RS00695	0.85	-1.6
149,984	+		LRK54_RS00695	0.85	-1.3
149,984	+		LRK54_RS00695	0.85	-2.5
149,984	+		LRK54_RS00695	0.85	-0.6
149,984	+		LRK54_RS00695	0.85	-2.4
149,984	+		LRK54_RS00695	0.85	-0.3
149,984	+		LRK54_RS00695	0.85	-0.3
149,984	+		LRK54_RS00695	0.85	+1.3
149,984	+		LRK54_RS00695	0.85	-1.3
149,984	+		LRK54_RS00695	0.85	-0.0
149,985	-		LRK54_RS00695	0.85	-1.9
149,985	-		LRK54_RS00695	0.85	-0.9
149,985	-		LRK54_RS00695	0.85	-1.3
149,985	-		LRK54_RS00695	0.85	-0.3
149,985	-		LRK54_RS00695	0.85	+0.7
149,985	-		LRK54_RS00695	0.85	-1.6
149,985	-		LRK54_RS00695	0.85	+1.0
149,985	-		LRK54_RS00695	0.85	-0.9
149,996	+		LRK54_RS00695	0.87	-1.1
149,996	+		LRK54_RS00695	0.87	-0.3
149,996	+		LRK54_RS00695	0.87	-0.9
149,997	-		LRK54_RS00695	0.87	-0.9
150,027	-				-1.3