Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4192

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGa0059261_4191 and Ga0059261_4192 are separated by 11 nucleotidesGa0059261_4192 and Ga0059261_4193 overlap by 4 nucleotides Ga0059261_4191: Ga0059261_4191 - polysaccharide chain length determinant protein, PEP-CTERM locus subfamily, at 4,341,263 to 4,342,783 _4191 Ga0059261_4192: Ga0059261_4192 - ATPases involved in chromosome partitioning, at 4,342,795 to 4,343,844 _4192 Ga0059261_4193: Ga0059261_4193 - hypothetical protein, at 4,343,841 to 4,345,427 _4193 Position (kb) 4342 4343 4344Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4341.839 kb on + strand, within Ga0059261_4191at 4341.839 kb on + strand, within Ga0059261_4191at 4341.839 kb on + strand, within Ga0059261_4191at 4341.865 kb on + strand, within Ga0059261_4191at 4341.865 kb on + strand, within Ga0059261_4191at 4341.865 kb on + strand, within Ga0059261_4191at 4341.865 kb on + strand, within Ga0059261_4191at 4341.865 kb on + strand, within Ga0059261_4191at 4341.866 kb on - strand, within Ga0059261_4191at 4341.866 kb on - strand, within Ga0059261_4191at 4341.866 kb on - strand, within Ga0059261_4191at 4342.043 kb on - strand, within Ga0059261_4191at 4342.199 kb on + strand, within Ga0059261_4191at 4342.199 kb on + strand, within Ga0059261_4191at 4342.355 kb on + strand, within Ga0059261_4191at 4342.355 kb on + strandat 4342.356 kb on - strand, within Ga0059261_4191at 4342.356 kb on - strand, within Ga0059261_4191at 4342.356 kb on - strand, within Ga0059261_4191at 4342.376 kb on + strand, within Ga0059261_4191at 4342.656 kb on + strandat 4342.656 kb on + strandat 4342.656 kb on + strandat 4342.656 kb on + strandat 4342.656 kb on + strandat 4342.657 kb on - strandat 4342.657 kb on - strandat 4342.856 kb on - strandat 4343.666 kb on + strand, within Ga0059261_4192at 4343.667 kb on - strand, within Ga0059261_4192at 4343.667 kb on - strand, within Ga0059261_4192at 4343.667 kb on - strand, within Ga0059261_4192at 4343.754 kb on + strandat 4343.754 kb on + strandat 4343.755 kb on - strandat 4343.755 kb on - strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.812 kb on + strandat 4343.813 kb on - strandat 4343.813 kb on - strandat 4343.813 kb on - strandat 4343.813 kb on - strandat 4343.813 kb on - strandat 4343.813 kb on - strandat 4343.813 kb on - strandat 4343.813 kb on - strandat 4343.821 kb on + strandat 4343.821 kb on + strandat 4343.821 kb on + strandat 4343.821 kb on + strandat 4343.821 kb on + strandat 4343.821 kb on + strandat 4343.821 kb on + strandat 4343.821 kb on + strandat 4343.822 kb on - strandat 4343.822 kb on - strandat 4343.822 kb on - strandat 4343.822 kb on - strandat 4343.822 kb on - strandat 4343.822 kb on - strandat 4343.987 kb on + strandat 4343.987 kb on + strandat 4343.987 kb on + strandat 4343.987 kb on + strandat 4343.987 kb on + strandat 4343.987 kb on + strandat 4343.988 kb on - strandat 4343.988 kb on - strandat 4343.988 kb on - strandat 4343.988 kb on - strandat 4343.995 kb on + strandat 4343.996 kb on - strandat 4343.996 kb on - strandat 4344.051 kb on + strand, within Ga0059261_4193at 4344.051 kb on + strand, within Ga0059261_4193at 4344.051 kb on + strand, within Ga0059261_4193at 4344.052 kb on - strand, within Ga0059261_4193at 4344.052 kb on - strand, within Ga0059261_4193at 4344.057 kb on + strand, within Ga0059261_4193at 4344.057 kb on + strand, within Ga0059261_4193at 4344.057 kb on + strand, within Ga0059261_4193at 4344.058 kb on - strand, within Ga0059261_4193at 4344.058 kb on - strand, within Ga0059261_4193at 4344.076 kb on - strand, within Ga0059261_4193at 4344.076 kb on - strand, within Ga0059261_4193at 4344.076 kb on - strand, within Ga0059261_4193at 4344.249 kb on + strand, within Ga0059261_4193at 4344.250 kb on - strand, within Ga0059261_4193at 4344.250 kb on - strand, within Ga0059261_4193at 4344.250 kb on - strand, within Ga0059261_4193at 4344.325 kb on - strand, within Ga0059261_4193at 4344.347 kb on + strand, within Ga0059261_4193at 4344.348 kb on - strand, within Ga0059261_4193at 4344.387 kb on + strand, within Ga0059261_4193at 4344.387 kb on + strand, within Ga0059261_4193at 4344.387 kb on + strand, within Ga0059261_4193at 4344.387 kb on + strand, within Ga0059261_4193at 4344.388 kb on - strand, within Ga0059261_4193at 4344.388 kb on - strand, within Ga0059261_4193at 4344.388 kb on - strand, within Ga0059261_4193at 4344.513 kb on + strand, within Ga0059261_4193at 4344.514 kb on - strand, within Ga0059261_4193at 4344.514 kb on - strand, within Ga0059261_4193at 4344.514 kb on - strand, within Ga0059261_4193at 4344.514 kb on - strand, within Ga0059261_4193at 4344.514 kb on - strand, within Ga0059261_4193at 4344.514 kb on - strand, within Ga0059261_4193at 4344.514 kb on - strand, within Ga0059261_4193at 4344.514 kb on - strand, within Ga0059261_4193at 4344.702 kb on + strand, within Ga0059261_4193at 4344.702 kb on + strand, within Ga0059261_4193at 4344.702 kb on + strand, within Ga0059261_4193at 4344.703 kb on - strand, within Ga0059261_4193at 4344.703 kb on - strand, within Ga0059261_4193at 4344.741 kb on + strand, within Ga0059261_4193at 4344.741 kb on + strand, within Ga0059261_4193at 4344.741 kb on + strand, within Ga0059261_4193at 4344.741 kb on + strand, within Ga0059261_4193at 4344.741 kb on + strand, within Ga0059261_4193at 4344.741 kb on + strand, within Ga0059261_4193at 4344.741 kb on + strand, within Ga0059261_4193at 4344.741 kb on + strand, within Ga0059261_4193at 4344.741 kb on + strand, within Ga0059261_4193at 4344.741 kb on + strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.742 kb on - strand, within Ga0059261_4193at 4344.789 kb on + strand, within Ga0059261_4193at 4344.790 kb on - strand, within Ga0059261_4193at 4344.804 kb on + strand, within Ga0059261_4193at 4344.804 kb on + strand, within Ga0059261_4193at 4344.804 kb on + strand, within Ga0059261_4193at 4344.804 kb on + strandat 4344.804 kb on + strand, within Ga0059261_4193at 4344.804 kb on + strand, within Ga0059261_4193at 4344.804 kb on + strand, within Ga0059261_4193at 4344.804 kb on + strand, within Ga0059261_4193at 4344.804 kb on + strand, within Ga0059261_4193at 4344.804 kb on + strand, within Ga0059261_4193at 4344.804 kb on + strand, within Ga0059261_4193at 4344.804 kb on + strand, within Ga0059261_4193at 4344.805 kb on - strand, within Ga0059261_4193at 4344.805 kb on - strand, within Ga0059261_4193at 4344.805 kb on - strand, within Ga0059261_4193at 4344.805 kb on - strand, within Ga0059261_4193at 4344.805 kb on - strand, within Ga0059261_4193at 4344.805 kb on - strand, within Ga0059261_4193at 4344.805 kb on - strand, within Ga0059261_4193at 4344.805 kb on - strand, within Ga0059261_4193at 4344.806 kb on + strand, within Ga0059261_4193at 4344.807 kb on - strand, within Ga0059261_4193

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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4,341,839 + Ga0059261_4191 0.38 +0.2
4,341,839 + Ga0059261_4191 0.38 -0.4
4,341,839 + Ga0059261_4191 0.38 +0.2
4,341,865 + Ga0059261_4191 0.40 -0.1
4,341,865 + Ga0059261_4191 0.40 +0.2
4,341,865 + Ga0059261_4191 0.40 +0.9
4,341,865 + Ga0059261_4191 0.40 +0.6
4,341,865 + Ga0059261_4191 0.40 +0.2
4,341,866 - Ga0059261_4191 0.40 +0.3
4,341,866 - Ga0059261_4191 0.40 +0.6
4,341,866 - Ga0059261_4191 0.40 +0.1
4,342,043 - Ga0059261_4191 0.51 +1.4
4,342,199 + Ga0059261_4191 0.62 +0.0
4,342,199 + Ga0059261_4191 0.62 +0.6
4,342,355 + Ga0059261_4191 0.72 +0.4
4,342,355 + +1.9
4,342,356 - Ga0059261_4191 0.72 +1.2
4,342,356 - Ga0059261_4191 0.72 +0.9
4,342,356 - Ga0059261_4191 0.72 +0.2
4,342,376 + Ga0059261_4191 0.73 +1.0
4,342,656 + +0.4
4,342,656 + +0.5
4,342,656 + +0.5
4,342,656 + +1.9
4,342,656 + +0.3
4,342,657 - +0.2
4,342,657 - +0.3
4,342,856 - +0.3
4,343,666 + Ga0059261_4192 0.83 +0.2
4,343,667 - Ga0059261_4192 0.83 +0.1
4,343,667 - Ga0059261_4192 0.83 +0.5
4,343,667 - Ga0059261_4192 0.83 -0.0
4,343,754 + +0.9
4,343,754 + +0.4
4,343,755 - -0.1
4,343,755 - -0.1
4,343,812 + -1.4
4,343,812 + -0.7
4,343,812 + -0.9
4,343,812 + +0.7
4,343,812 + -0.4
4,343,812 + -0.5
4,343,812 + -0.4
4,343,812 + +0.3
4,343,812 + -0.5
4,343,812 + -0.3
4,343,812 + +0.3
4,343,812 + -0.1
4,343,812 + +0.1
4,343,812 + +0.2
4,343,812 + +0.2
4,343,812 + -0.1
4,343,813 - -0.1
4,343,813 - -0.7
4,343,813 - -0.2
4,343,813 - +1.3
4,343,813 - +0.8
4,343,813 - +0.3
4,343,813 - -0.1
4,343,813 - +0.4
4,343,821 + +0.2
4,343,821 + -0.4
4,343,821 + -0.5
4,343,821 + +1.1
4,343,821 + -0.0
4,343,821 + -0.2
4,343,821 + -0.1
4,343,821 + -0.1
4,343,822 - +0.0
4,343,822 - -0.2
4,343,822 - -0.7
4,343,822 - -1.0
4,343,822 - +0.2
4,343,822 - +0.6
4,343,987 + +0.5
4,343,987 + +0.0
4,343,987 + -0.6
4,343,987 + +0.1
4,343,987 + -0.0
4,343,987 + +0.1
4,343,988 - +0.0
4,343,988 - -0.5
4,343,988 - +0.6
4,343,988 - +0.9
4,343,995 + +0.4
4,343,996 - +0.5
4,343,996 - +0.3
4,344,051 + Ga0059261_4193 0.13 +0.5
4,344,051 + Ga0059261_4193 0.13 +0.1
4,344,051 + Ga0059261_4193 0.13 +0.0
4,344,052 - Ga0059261_4193 0.13 -0.8
4,344,052 - Ga0059261_4193 0.13 +0.4
4,344,057 + Ga0059261_4193 0.14 +0.2
4,344,057 + Ga0059261_4193 0.14 +0.4
4,344,057 + Ga0059261_4193 0.14 +0.4
4,344,058 - Ga0059261_4193 0.14 -0.9
4,344,058 - Ga0059261_4193 0.14 +0.0
4,344,076 - Ga0059261_4193 0.15 -0.7
4,344,076 - Ga0059261_4193 0.15 +1.1
4,344,076 - Ga0059261_4193 0.15 +0.7
4,344,249 + Ga0059261_4193 0.26 +1.0
4,344,250 - Ga0059261_4193 0.26 -0.3
4,344,250 - Ga0059261_4193 0.26 +0.5
4,344,250 - Ga0059261_4193 0.26 +0.8
4,344,325 - Ga0059261_4193 0.30 +0.8
4,344,347 + Ga0059261_4193 0.32 -0.2
4,344,348 - Ga0059261_4193 0.32 +0.1
4,344,387 + Ga0059261_4193 0.34 +0.9
4,344,387 + Ga0059261_4193 0.34 +0.7
4,344,387 + Ga0059261_4193 0.34 -3.3
4,344,387 + Ga0059261_4193 0.34 -0.3
4,344,388 - Ga0059261_4193 0.34 +0.0
4,344,388 - Ga0059261_4193 0.34 +0.0
4,344,388 - Ga0059261_4193 0.34 +1.7
4,344,513 + Ga0059261_4193 0.42 +0.7
4,344,514 - Ga0059261_4193 0.42 +1.0
4,344,514 - Ga0059261_4193 0.42 +0.2
4,344,514 - Ga0059261_4193 0.42 -0.7
4,344,514 - Ga0059261_4193 0.42 +1.1
4,344,514 - Ga0059261_4193 0.42 +0.2
4,344,514 - Ga0059261_4193 0.42 +0.5
4,344,514 - Ga0059261_4193 0.42 -0.6
4,344,514 - Ga0059261_4193 0.42 +0.0
4,344,702 + Ga0059261_4193 0.54 +0.8
4,344,702 + Ga0059261_4193 0.54 -0.2
4,344,702 + Ga0059261_4193 0.54 -4.0
4,344,703 - Ga0059261_4193 0.54 +1.4
4,344,703 - Ga0059261_4193 0.54 +0.0
4,344,741 + Ga0059261_4193 0.57 +0.8
4,344,741 + Ga0059261_4193 0.57 -0.0
4,344,741 + Ga0059261_4193 0.57 -1.0
4,344,741 + Ga0059261_4193 0.57 +0.7
4,344,741 + Ga0059261_4193 0.57 +0.7
4,344,741 + Ga0059261_4193 0.57 +0.6
4,344,741 + Ga0059261_4193 0.57 +0.3
4,344,741 + Ga0059261_4193 0.57 +0.5
4,344,741 + Ga0059261_4193 0.57 +0.3
4,344,741 + Ga0059261_4193 0.57 -0.2
4,344,742 - Ga0059261_4193 0.57 -0.1
4,344,742 - Ga0059261_4193 0.57 +0.4
4,344,742 - Ga0059261_4193 0.57 -0.1
4,344,742 - Ga0059261_4193 0.57 -0.1
4,344,742 - Ga0059261_4193 0.57 +0.4
4,344,742 - Ga0059261_4193 0.57 +0.5
4,344,742 - Ga0059261_4193 0.57 -0.1
4,344,742 - Ga0059261_4193 0.57 +0.1
4,344,742 - Ga0059261_4193 0.57 +0.8
4,344,742 - Ga0059261_4193 0.57 +0.4
4,344,742 - Ga0059261_4193 0.57 +0.4
4,344,742 - Ga0059261_4193 0.57 +0.4
4,344,789 + Ga0059261_4193 0.60 -0.4
4,344,790 - Ga0059261_4193 0.60 -0.6
4,344,804 + Ga0059261_4193 0.61 +0.0
4,344,804 + Ga0059261_4193 0.61 +0.7
4,344,804 + Ga0059261_4193 0.61 +0.5
4,344,804 + -0.4
4,344,804 + Ga0059261_4193 0.61 +1.3
4,344,804 + Ga0059261_4193 0.61 +0.6
4,344,804 + Ga0059261_4193 0.61 -0.2
4,344,804 + Ga0059261_4193 0.61 +0.2
4,344,804 + Ga0059261_4193 0.61 +0.3
4,344,804 + Ga0059261_4193 0.61 -0.2
4,344,804 + Ga0059261_4193 0.61 +0.0
4,344,804 + Ga0059261_4193 0.61 -0.3
4,344,805 - Ga0059261_4193 0.61 +0.1
4,344,805 - Ga0059261_4193 0.61 +0.1
4,344,805 - Ga0059261_4193 0.61 -0.1
4,344,805 - Ga0059261_4193 0.61 +1.0
4,344,805 - Ga0059261_4193 0.61 +0.3
4,344,805 - Ga0059261_4193 0.61 +0.9
4,344,805 - Ga0059261_4193 0.61 -0.0
4,344,805 - Ga0059261_4193 0.61 +0.0
4,344,806 + Ga0059261_4193 0.61 +0.5
4,344,807 - Ga0059261_4193 0.61 +0.4

Or see this region's nucleotide sequence