Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4190

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
4,339,608	+		Ga0059261_4188	0.81	+0.5
4,339,608	+		Ga0059261_4188	0.81	+0.0
4,339,608	+		Ga0059261_4188	0.81	+0.0
4,339,609	-		Ga0059261_4188	0.81	-1.4
4,339,747	+				-1.7
4,339,747	+				-0.9
4,339,748	-				-1.1
4,339,748	-				-0.1
4,339,764	+				+0.4
4,339,765	-				-0.9
4,339,765	-				-1.1
4,339,864	+				+1.2
4,339,864	+				+0.3
4,339,864	+				+2.0
4,339,864	+				+0.4
4,339,865	-				-2.1
4,339,865	-				+1.7
4,339,865	-				+0.1
4,339,865	-				+1.2
4,339,967	+		Ga0059261_4189	0.30	-0.2
4,340,083	+		Ga0059261_4189	0.57	+0.5
4,340,084	-		Ga0059261_4189	0.57	+0.6
4,340,099	+		Ga0059261_4189	0.60	+1.5
4,340,099	+		Ga0059261_4189	0.60	+0.5
4,340,099	+		Ga0059261_4189	0.60	+1.1
4,340,099	+				+1.9
4,340,100	-		Ga0059261_4189	0.61	+1.5
4,340,180	+		Ga0059261_4189	0.79	+0.5
4,340,180	+		Ga0059261_4189	0.79	+0.8
4,340,180	+		Ga0059261_4189	0.79	+1.3
4,340,180	+		Ga0059261_4189	0.79	+0.7
4,340,180	+		Ga0059261_4189	0.79	+0.6
4,340,180	+		Ga0059261_4189	0.79	+0.2
4,340,181	-		Ga0059261_4189	0.79	-0.8
4,340,181	-		Ga0059261_4189	0.79	+0.2
4,340,181	-		Ga0059261_4189	0.79	+0.1
4,340,248	+				-0.1
4,340,249	-				+0.5
4,340,249	-				+1.4
4,340,251	+				+1.4
4,340,251	+				+0.8
4,340,251	+				+0.9
4,340,251	+				+1.0
4,340,251	+				+0.2
4,340,252	-				+0.1
4,340,252	-				+0.2
4,340,252	-				+0.4
4,340,252	-				+1.3
4,340,252	-				+0.5
4,340,252	-				+1.0
4,340,252	-				+1.0
4,340,252	-				+1.4
4,340,252	-				+0.7
4,340,403	+				+1.2
4,340,403	+				+1.7
4,340,403	+				+0.5
4,340,403	+				+0.6
4,340,404	-				+0.5
4,340,404	-				+0.7
4,340,404	-				+0.6
4,340,405	+				+1.4
4,340,405	+				+0.5
4,340,405	+				+0.3
4,340,405	+				+0.7
4,340,405	+				-0.6
4,340,405	+				+0.9
4,340,406	-				+0.8
4,340,406	-				+0.7
4,340,406	-				+0.4
4,340,406	-				-0.5
4,340,406	-				+0.1
4,340,406	-				+1.7
4,340,406	-				+0.8
4,340,406	-				+0.8
4,340,465	+				-0.1
4,340,465	+				+0.4
4,340,466	-				-0.0
4,340,466	-				+0.5
4,340,509	+				+0.3
4,340,510	-				+0.3
4,340,515	+				+0.5
4,340,523	+				+0.3
4,340,524	-				-0.3
4,340,524	-				-0.0
4,340,524	-				+0.0
4,340,524	-				+0.2
4,340,524	-				+0.6
4,340,529	+				+1.8
4,340,530	-				+0.6
4,340,552	+				+0.3
4,340,552	+				+1.0
4,340,552	+				+0.1
4,340,552	+				+0.8
4,340,552	+				-1.1
4,340,553	-				+1.3
4,340,553	-				+0.7
4,340,553	-				+0.4
4,340,553	-				+1.0
4,340,620	+				+1.0
4,340,621	-				+0.9
4,340,621	-				+2.0
4,340,621	-				+0.8
4,340,621	-				+0.6
4,340,621	-				+0.4
4,340,621	-				+0.4
4,340,686	+		Ga0059261_4190	0.12	+0.3
4,340,687	-		Ga0059261_4190	0.13	-1.2
4,340,710	+		Ga0059261_4190	0.16	-0.6
4,340,710	+		Ga0059261_4190	0.16	-0.1
4,340,710	+		Ga0059261_4190	0.16	-1.1
4,340,710	+		Ga0059261_4190	0.16	+1.1
4,340,711	-		Ga0059261_4190	0.16	+1.4
4,340,711	-		Ga0059261_4190	0.16	+0.4
4,340,711	-		Ga0059261_4190	0.16	-0.1
4,340,747	+		Ga0059261_4190	0.22	+0.3
4,340,747	+		Ga0059261_4190	0.22	+0.4
4,340,747	+		Ga0059261_4190	0.22	+0.7
4,340,747	+		Ga0059261_4190	0.22	+0.5
4,340,747	+		Ga0059261_4190	0.22	+0.5
4,340,747	+		Ga0059261_4190	0.22	+0.2
4,340,747	+		Ga0059261_4190	0.22	+0.3
4,340,748	-		Ga0059261_4190	0.22	-0.1
4,340,748	-		Ga0059261_4190	0.22	+0.6
4,340,748	-		Ga0059261_4190	0.22	+2.1
4,340,748	-		Ga0059261_4190	0.22	+1.0
4,340,748	-		Ga0059261_4190	0.22	+1.2
4,340,748	-		Ga0059261_4190	0.22	+0.1
4,340,784	+		Ga0059261_4190	0.28	+0.3
4,340,785	-		Ga0059261_4190	0.28	-0.4
4,340,925	-		Ga0059261_4190	0.49	-0.6
4,340,925	-		Ga0059261_4190	0.49	+0.3
4,340,925	-		Ga0059261_4190	0.49	+0.4
4,340,926	+		Ga0059261_4190	0.50	+0.1
4,340,926	+		Ga0059261_4190	0.50	+0.1
4,340,926	+		Ga0059261_4190	0.50	-0.1
4,340,926	+		Ga0059261_4190	0.50	+0.0
4,340,926	+		Ga0059261_4190	0.50	+0.8
4,340,926	+		Ga0059261_4190	0.50	-0.7
4,340,927	-		Ga0059261_4190	0.50	+0.7
4,340,927	-		Ga0059261_4190	0.50	+0.6
4,340,927	-		Ga0059261_4190	0.50	-1.1
4,340,927	-		Ga0059261_4190	0.50	+0.1
4,340,927	-		Ga0059261_4190	0.50	+0.4
4,340,927	-		Ga0059261_4190	0.50	+1.6
4,341,149	+		Ga0059261_4190	0.84	+1.2
4,341,149	+		Ga0059261_4190	0.84	+0.3
4,341,149	+		Ga0059261_4190	0.84	+0.2
4,341,226	+				+0.4
4,341,226	+				+0.4
4,341,226	+				+0.9
4,341,227	-				+0.1
4,341,227	-				+0.2
4,341,248	+				+0.4
4,341,249	-				+0.2
4,341,249	-				+0.3
4,341,392	+				+0.1
4,341,392	+				+0.3
4,341,392	+				+1.0
4,341,392	+				+1.9
4,341,393	-				+0.5
4,341,393	-				+0.1
4,341,393	-				+0.8
4,341,393	-				+0.4
4,341,393	-				-0.4
4,341,703	+		Ga0059261_4191	0.29	+0.9
4,341,718	+		Ga0059261_4191	0.30	-1.7
4,341,719	-		Ga0059261_4191	0.30	+0.5
4,341,719	-		Ga0059261_4191	0.30	-0.1
4,341,839	+		Ga0059261_4191	0.38	+0.2
4,341,839	+		Ga0059261_4191	0.38	-0.4
4,341,839	+		Ga0059261_4191	0.38	+0.2
4,341,865	+		Ga0059261_4191	0.40	-0.1
4,341,865	+		Ga0059261_4191	0.40	+0.2
4,341,865	+		Ga0059261_4191	0.40	+0.9
4,341,865	+		Ga0059261_4191	0.40	+0.6
4,341,865	+		Ga0059261_4191	0.40	+0.2
4,341,866	-		Ga0059261_4191	0.40	+0.3
4,341,866	-		Ga0059261_4191	0.40	+0.6
4,341,866	-		Ga0059261_4191	0.40	+0.1
4,342,043	-		Ga0059261_4191	0.51	+1.4
4,342,199	+		Ga0059261_4191	0.62	+0.0
4,342,199	+		Ga0059261_4191	0.62	+0.6