Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3656 and Ga0059261_3657 are separated by 85 nucleotides Ga0059261_3657 and Ga0059261_3658 are separated by 97 nucleotides Ga0059261_3658 and Ga0059261_3659 are separated by 9 nucleotides Ga0059261_3659 and Ga0059261_3660 overlap by 1 nucleotides
Ga0059261_3656: Ga0059261_3656 - ABC-type phosphate transport system, periplasmic component, at 3,770,651 to 3,771,679
_3656
Ga0059261_3657: Ga0059261_3657 - His Kinase A (phospho-acceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, at 3,771,765 to 3,772,970
_3657
Ga0059261_3658: Ga0059261_3658 - hypothetical protein, at 3,773,068 to 3,773,481
_3658
Ga0059261_3659: Ga0059261_3659 - PqqD family protein, HPr-rel-A system, at 3,773,491 to 3,773,760
_3659
Ga0059261_3660: Ga0059261_3660 - HprK-related kinase A, at 3,773,760 to 3,774,623
_3660
Position (kb)
3771
3772
3773 Strain fitness (log2 ratio)
-2
-1
0
1 at 3771.821 kb on + strand at 3771.822 kb on - strand at 3771.822 kb on - strand at 3771.822 kb on - strand at 3771.822 kb on - strand at 3771.876 kb on - strand at 3771.876 kb on - strand at 3771.876 kb on - strand at 3771.876 kb on - strand at 3771.944 kb on - strand, within Ga0059261_3657 at 3771.944 kb on - strand, within Ga0059261_3657 at 3772.072 kb on + strand, within Ga0059261_3657 at 3772.072 kb on + strand, within Ga0059261_3657 at 3772.073 kb on - strand, within Ga0059261_3657 at 3772.073 kb on - strand, within Ga0059261_3657 at 3772.094 kb on + strand, within Ga0059261_3657 at 3772.094 kb on + strand, within Ga0059261_3657 at 3772.144 kb on - strand, within Ga0059261_3657 at 3772.166 kb on + strand, within Ga0059261_3657 at 3772.167 kb on - strand, within Ga0059261_3657 at 3772.167 kb on - strand, within Ga0059261_3657 at 3772.167 kb on - strand, within Ga0059261_3657 at 3772.167 kb on - strand, within Ga0059261_3657 at 3772.259 kb on - strand, within Ga0059261_3657 at 3772.425 kb on + strand, within Ga0059261_3657 at 3772.425 kb on + strand, within Ga0059261_3657 at 3772.426 kb on - strand, within Ga0059261_3657 at 3772.508 kb on + strand, within Ga0059261_3657 at 3772.508 kb on + strand, within Ga0059261_3657 at 3772.508 kb on + strand, within Ga0059261_3657 at 3772.509 kb on - strand, within Ga0059261_3657 at 3772.509 kb on - strand, within Ga0059261_3657 at 3772.534 kb on - strand, within Ga0059261_3657 at 3772.668 kb on + strand, within Ga0059261_3657 at 3772.668 kb on + strand, within Ga0059261_3657 at 3772.668 kb on + strand, within Ga0059261_3657 at 3772.668 kb on + strand at 3772.668 kb on + strand, within Ga0059261_3657 at 3772.669 kb on - strand, within Ga0059261_3657 at 3772.669 kb on - strand, within Ga0059261_3657 at 3772.669 kb on - strand, within Ga0059261_3657 at 3772.670 kb on + strand, within Ga0059261_3657 at 3772.670 kb on + strand at 3772.670 kb on + strand, within Ga0059261_3657 at 3772.671 kb on - strand, within Ga0059261_3657 at 3772.671 kb on - strand, within Ga0059261_3657 at 3772.671 kb on - strand at 3772.671 kb on - strand, within Ga0059261_3657 at 3772.671 kb on - strand, within Ga0059261_3657 at 3772.671 kb on - strand, within Ga0059261_3657 at 3772.671 kb on - strand, within Ga0059261_3657 at 3772.671 kb on - strand, within Ga0059261_3657 at 3772.671 kb on - strand, within Ga0059261_3657 at 3772.671 kb on - strand, within Ga0059261_3657 at 3772.671 kb on - strand at 3772.671 kb on - strand, within Ga0059261_3657 at 3772.734 kb on + strand, within Ga0059261_3657 at 3772.851 kb on - strand at 3772.971 kb on - strand at 3772.981 kb on + strand at 3772.982 kb on - strand at 3772.982 kb on - strand at 3773.062 kb on + strand at 3773.062 kb on + strand at 3773.062 kb on + strand at 3773.062 kb on + strand at 3773.062 kb on + strand at 3773.062 kb on + strand at 3773.063 kb on - strand at 3773.063 kb on - strand at 3773.091 kb on + strand at 3773.257 kb on + strand, within Ga0059261_3658 at 3773.257 kb on + strand, within Ga0059261_3658 at 3773.257 kb on + strand, within Ga0059261_3658 at 3773.257 kb on + strand, within Ga0059261_3658 at 3773.257 kb on + strand at 3773.257 kb on + strand at 3773.257 kb on + strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.258 kb on - strand, within Ga0059261_3658 at 3773.259 kb on + strand, within Ga0059261_3658 at 3773.260 kb on - strand, within Ga0059261_3658 at 3773.260 kb on - strand, within Ga0059261_3658 at 3773.260 kb on - strand, within Ga0059261_3658 at 3773.401 kb on + strand, within Ga0059261_3658 at 3773.401 kb on + strand, within Ga0059261_3658 at 3773.401 kb on + strand, within Ga0059261_3658 at 3773.402 kb on - strand, within Ga0059261_3658 at 3773.402 kb on - strand, within Ga0059261_3658 at 3773.402 kb on - strand, within Ga0059261_3658 at 3773.403 kb on + strand, within Ga0059261_3658 at 3773.403 kb on + strand, within Ga0059261_3658 at 3773.403 kb on + strand, within Ga0059261_3658 at 3773.403 kb on + strand, within Ga0059261_3658 at 3773.404 kb on - strand, within Ga0059261_3658 at 3773.404 kb on - strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.410 kb on + strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.411 kb on - strand, within Ga0059261_3658 at 3773.412 kb on + strand, within Ga0059261_3658 at 3773.413 kb on - strand, within Ga0059261_3658 at 3773.413 kb on - strand, within Ga0059261_3658 at 3773.446 kb on - strand at 3773.446 kb on - strand at 3773.446 kb on - strand at 3773.535 kb on - strand, within Ga0059261_3659 at 3773.535 kb on - strand, within Ga0059261_3659 at 3773.560 kb on + strand, within Ga0059261_3659 at 3773.560 kb on + strand, within Ga0059261_3659 at 3773.561 kb on - strand, within Ga0059261_3659 at 3773.561 kb on - strand, within Ga0059261_3659 at 3773.561 kb on - strand, within Ga0059261_3659 at 3773.640 kb on + strand, within Ga0059261_3659 at 3773.640 kb on + strand, within Ga0059261_3659 at 3773.641 kb on - strand, within Ga0059261_3659 at 3773.850 kb on + strand, within Ga0059261_3660 at 3773.850 kb on + strand, within Ga0059261_3660 at 3773.851 kb on - strand, within Ga0059261_3660 at 3773.851 kb on - strand, within Ga0059261_3660 at 3773.851 kb on - strand, within Ga0059261_3660 at 3773.851 kb on - strand, within Ga0059261_3660 at 3773.860 kb on - strand, within Ga0059261_3660 at 3773.860 kb on - strand, within Ga0059261_3660 at 3773.967 kb on - strand, within Ga0059261_3660
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,771,821 + +0.2 3,771,822 - +1.1 3,771,822 - +0.8 3,771,822 - +0.6 3,771,822 - +1.7 3,771,876 - +0.8 3,771,876 - +0.7 3,771,876 - -0.6 3,771,876 - -0.7 3,771,944 - Ga0059261_3657 0.15 +1.3 3,771,944 - Ga0059261_3657 0.15 +1.0 3,772,072 + Ga0059261_3657 0.25 +0.4 3,772,072 + Ga0059261_3657 0.25 +0.9 3,772,073 - Ga0059261_3657 0.26 +0.4 3,772,073 - Ga0059261_3657 0.26 +1.3 3,772,094 + Ga0059261_3657 0.27 -0.1 3,772,094 + Ga0059261_3657 0.27 +1.6 3,772,144 - Ga0059261_3657 0.31 +0.6 3,772,166 + Ga0059261_3657 0.33 +0.4 3,772,167 - Ga0059261_3657 0.33 -1.3 3,772,167 - Ga0059261_3657 0.33 +0.3 3,772,167 - Ga0059261_3657 0.33 +0.4 3,772,167 - Ga0059261_3657 0.33 -0.3 3,772,259 - Ga0059261_3657 0.41 +0.6 3,772,425 + Ga0059261_3657 0.55 -0.2 3,772,425 + Ga0059261_3657 0.55 -1.3 3,772,426 - Ga0059261_3657 0.55 +1.7 3,772,508 + Ga0059261_3657 0.62 -0.4 3,772,508 + Ga0059261_3657 0.62 -1.2 3,772,508 + Ga0059261_3657 0.62 -0.7 3,772,509 - Ga0059261_3657 0.62 +0.3 3,772,509 - Ga0059261_3657 0.62 +0.3 3,772,534 - Ga0059261_3657 0.64 +0.5 3,772,668 + Ga0059261_3657 0.75 +0.8 3,772,668 + Ga0059261_3657 0.75 -0.6 3,772,668 + Ga0059261_3657 0.75 -0.7 3,772,668 + +1.4 3,772,668 + Ga0059261_3657 0.75 +0.3 3,772,669 - Ga0059261_3657 0.75 +0.9 3,772,669 - Ga0059261_3657 0.75 +0.1 3,772,669 - Ga0059261_3657 0.75 -0.3 3,772,670 + Ga0059261_3657 0.75 +0.5 3,772,670 + +1.4 3,772,670 + Ga0059261_3657 0.75 +0.6 3,772,671 - Ga0059261_3657 0.75 -2.0 3,772,671 - Ga0059261_3657 0.75 +1.2 3,772,671 - -0.9 3,772,671 - Ga0059261_3657 0.75 +1.1 3,772,671 - Ga0059261_3657 0.75 +1.4 3,772,671 - Ga0059261_3657 0.75 +0.1 3,772,671 - Ga0059261_3657 0.75 +1.0 3,772,671 - Ga0059261_3657 0.75 +0.3 3,772,671 - Ga0059261_3657 0.75 +0.4 3,772,671 - Ga0059261_3657 0.75 +1.0 3,772,671 - +0.4 3,772,671 - Ga0059261_3657 0.75 -0.1 3,772,734 + Ga0059261_3657 0.80 +0.0 3,772,851 - -0.2 3,772,971 - +0.7 3,772,981 + -1.9 3,772,982 - -0.3 3,772,982 - +0.1 3,773,062 + -0.5 3,773,062 + +0.9 3,773,062 + +0.1 3,773,062 + -0.2 3,773,062 + +0.3 3,773,062 + -0.3 3,773,063 - +1.4 3,773,063 - +0.7 3,773,091 + -0.1 3,773,257 + Ga0059261_3658 0.46 +0.6 3,773,257 + Ga0059261_3658 0.46 +1.2 3,773,257 + Ga0059261_3658 0.46 -0.0 3,773,257 + Ga0059261_3658 0.46 -0.0 3,773,257 + -1.2 3,773,257 + +0.4 3,773,257 + Ga0059261_3658 0.46 -0.9 3,773,258 - Ga0059261_3658 0.46 +1.4 3,773,258 - Ga0059261_3658 0.46 +0.5 3,773,258 - Ga0059261_3658 0.46 -0.2 3,773,258 - Ga0059261_3658 0.46 -0.0 3,773,258 - Ga0059261_3658 0.46 +0.3 3,773,258 - Ga0059261_3658 0.46 -0.1 3,773,258 - Ga0059261_3658 0.46 +0.4 3,773,258 - Ga0059261_3658 0.46 -0.1 3,773,258 - Ga0059261_3658 0.46 +0.7 3,773,258 - Ga0059261_3658 0.46 +0.4 3,773,258 - Ga0059261_3658 0.46 +0.0 3,773,258 - Ga0059261_3658 0.46 +0.8 3,773,258 - Ga0059261_3658 0.46 +0.8 3,773,259 + Ga0059261_3658 0.46 +0.1 3,773,260 - Ga0059261_3658 0.46 +1.1 3,773,260 - Ga0059261_3658 0.46 +1.0 3,773,260 - Ga0059261_3658 0.46 +1.4 3,773,401 + Ga0059261_3658 0.80 -0.1 3,773,401 + Ga0059261_3658 0.80 -0.8 3,773,401 + Ga0059261_3658 0.80 -0.4 3,773,402 - Ga0059261_3658 0.81 +0.2 3,773,402 - Ga0059261_3658 0.81 +0.6 3,773,402 - Ga0059261_3658 0.81 -0.1 3,773,403 + Ga0059261_3658 0.81 +0.5 3,773,403 + Ga0059261_3658 0.81 +0.4 3,773,403 + Ga0059261_3658 0.81 +1.3 3,773,403 + Ga0059261_3658 0.81 +0.7 3,773,404 - Ga0059261_3658 0.81 +1.2 3,773,404 - Ga0059261_3658 0.81 +0.1 3,773,410 + Ga0059261_3658 0.83 -0.3 3,773,410 + Ga0059261_3658 0.83 +0.7 3,773,410 + Ga0059261_3658 0.83 +0.2 3,773,410 + Ga0059261_3658 0.83 -0.7 3,773,410 + Ga0059261_3658 0.83 +1.1 3,773,410 + Ga0059261_3658 0.83 +0.7 3,773,410 + Ga0059261_3658 0.83 +0.4 3,773,410 + Ga0059261_3658 0.83 +0.1 3,773,410 + Ga0059261_3658 0.83 +0.9 3,773,410 + Ga0059261_3658 0.83 -2.1 3,773,410 + Ga0059261_3658 0.83 +1.1 3,773,410 + Ga0059261_3658 0.83 +0.9 3,773,410 + Ga0059261_3658 0.83 +0.2 3,773,410 + Ga0059261_3658 0.83 -0.5 3,773,410 + Ga0059261_3658 0.83 +0.2 3,773,410 + Ga0059261_3658 0.83 -0.2 3,773,410 + Ga0059261_3658 0.83 +0.5 3,773,410 + Ga0059261_3658 0.83 -0.2 3,773,410 + Ga0059261_3658 0.83 +0.6 3,773,410 + Ga0059261_3658 0.83 +0.6 3,773,410 + Ga0059261_3658 0.83 +0.9 3,773,411 - Ga0059261_3658 0.83 +0.8 3,773,411 - Ga0059261_3658 0.83 +0.7 3,773,411 - Ga0059261_3658 0.83 +0.4 3,773,411 - Ga0059261_3658 0.83 +0.4 3,773,411 - Ga0059261_3658 0.83 +0.6 3,773,411 - Ga0059261_3658 0.83 +0.5 3,773,411 - Ga0059261_3658 0.83 +1.0 3,773,411 - Ga0059261_3658 0.83 +0.3 3,773,411 - Ga0059261_3658 0.83 -0.4 3,773,411 - Ga0059261_3658 0.83 -0.1 3,773,411 - Ga0059261_3658 0.83 -0.3 3,773,411 - Ga0059261_3658 0.83 -0.4 3,773,411 - Ga0059261_3658 0.83 +0.0 3,773,411 - Ga0059261_3658 0.83 -0.6 3,773,412 + Ga0059261_3658 0.83 -0.3 3,773,413 - Ga0059261_3658 0.83 +0.1 3,773,413 - Ga0059261_3658 0.83 +0.2 3,773,446 - -0.1 3,773,446 - -0.5 3,773,446 - -0.0 3,773,535 - Ga0059261_3659 0.16 +0.5 3,773,535 - Ga0059261_3659 0.16 +0.0 3,773,560 + Ga0059261_3659 0.26 +0.0 3,773,560 + Ga0059261_3659 0.26 +0.2 3,773,561 - Ga0059261_3659 0.26 +0.2 3,773,561 - Ga0059261_3659 0.26 +0.5 3,773,561 - Ga0059261_3659 0.26 +0.0 3,773,640 + Ga0059261_3659 0.55 -0.0 3,773,640 + Ga0059261_3659 0.55 -0.1 3,773,641 - Ga0059261_3659 0.56 +0.5 3,773,850 + Ga0059261_3660 0.10 -0.2 3,773,850 + Ga0059261_3660 0.10 +0.4 3,773,851 - Ga0059261_3660 0.11 +0.7 3,773,851 - Ga0059261_3660 0.11 +0.6 3,773,851 - Ga0059261_3660 0.11 -0.2 3,773,851 - Ga0059261_3660 0.11 +0.4 3,773,860 - Ga0059261_3660 0.12 -1.3 3,773,860 - Ga0059261_3660 0.12 -0.2 3,773,967 - Ga0059261_3660 0.24 -0.2
Or see this region's nucleotide sequence