Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2729 and Ga0059261_2730 overlap by 4 nucleotides Ga0059261_2730 and Ga0059261_2731 overlap by 4 nucleotides Ga0059261_2731 and Ga0059261_2732 are separated by 50 nucleotides
Ga0059261_2729: Ga0059261_2729 - threonyl-tRNA synthetase (EC 6.1.1.3), at 2,840,852 to 2,842,843
_2729
Ga0059261_2730: Ga0059261_2730 - Sortase and related acyltransferases, at 2,842,840 to 2,843,283
_2730
Ga0059261_2731: Ga0059261_2731 - transcriptional regulator, AraC family, at 2,843,280 to 2,843,933
_2731
Ga0059261_2732: Ga0059261_2732 - hypothetical protein, at 2,843,984 to 2,845,129
_2732
Position (kb)
2842
2843
2844 Strain fitness (log2 ratio)
-1
0
1 at 2843.183 kb on - strand, within Ga0059261_2730 at 2843.183 kb on - strand, within Ga0059261_2730 at 2843.343 kb on + strand at 2843.343 kb on + strand at 2843.344 kb on - strand at 2843.344 kb on - strand at 2843.344 kb on - strand at 2843.344 kb on - strand at 2843.344 kb on - strand at 2843.371 kb on - strand, within Ga0059261_2731 at 2843.652 kb on - strand, within Ga0059261_2731 at 2843.745 kb on + strand, within Ga0059261_2731 at 2843.746 kb on - strand, within Ga0059261_2731 at 2843.746 kb on - strand, within Ga0059261_2731 at 2843.746 kb on - strand, within Ga0059261_2731 at 2843.746 kb on - strand, within Ga0059261_2731 at 2843.746 kb on - strand, within Ga0059261_2731 at 2843.931 kb on + strand at 2843.974 kb on + strand at 2843.974 kb on + strand at 2843.975 kb on - strand at 2844.152 kb on + strand, within Ga0059261_2732 at 2844.152 kb on + strand, within Ga0059261_2732 at 2844.153 kb on - strand at 2844.153 kb on - strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.161 kb on + strand, within Ga0059261_2732 at 2844.162 kb on - strand, within Ga0059261_2732 at 2844.162 kb on - strand, within Ga0059261_2732 at 2844.162 kb on - strand, within Ga0059261_2732 at 2844.162 kb on - strand, within Ga0059261_2732 at 2844.162 kb on - strand, within Ga0059261_2732 at 2844.162 kb on - strand, within Ga0059261_2732 at 2844.162 kb on - strand, within Ga0059261_2732 at 2844.162 kb on - strand, within Ga0059261_2732 at 2844.164 kb on + strand, within Ga0059261_2732 at 2844.164 kb on + strand, within Ga0059261_2732 at 2844.164 kb on + strand, within Ga0059261_2732 at 2844.164 kb on + strand, within Ga0059261_2732 at 2844.164 kb on + strand, within Ga0059261_2732 at 2844.164 kb on + strand, within Ga0059261_2732 at 2844.164 kb on + strand, within Ga0059261_2732 at 2844.164 kb on + strand, within Ga0059261_2732 at 2844.164 kb on + strand, within Ga0059261_2732 at 2844.165 kb on - strand, within Ga0059261_2732 at 2844.165 kb on - strand, within Ga0059261_2732 at 2844.165 kb on - strand, within Ga0059261_2732 at 2844.165 kb on - strand, within Ga0059261_2732 at 2844.165 kb on - strand, within Ga0059261_2732 at 2844.165 kb on - strand, within Ga0059261_2732 at 2844.165 kb on - strand at 2844.254 kb on + strand, within Ga0059261_2732 at 2844.254 kb on + strand, within Ga0059261_2732 at 2844.254 kb on + strand, within Ga0059261_2732 at 2844.255 kb on - strand, within Ga0059261_2732 at 2844.255 kb on - strand, within Ga0059261_2732 at 2844.255 kb on - strand, within Ga0059261_2732 at 2844.255 kb on - strand, within Ga0059261_2732 at 2844.255 kb on - strand, within Ga0059261_2732
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,843,183 - Ga0059261_2730 0.77 -0.2 2,843,183 - Ga0059261_2730 0.77 +0.9 2,843,343 + +1.1 2,843,343 + -0.5 2,843,344 - -0.5 2,843,344 - +0.2 2,843,344 - -0.2 2,843,344 - -0.0 2,843,344 - -0.3 2,843,371 - Ga0059261_2731 0.14 -1.1 2,843,652 - Ga0059261_2731 0.57 -0.4 2,843,745 + Ga0059261_2731 0.71 -0.0 2,843,746 - Ga0059261_2731 0.71 -1.2 2,843,746 - Ga0059261_2731 0.71 -0.1 2,843,746 - Ga0059261_2731 0.71 +0.4 2,843,746 - Ga0059261_2731 0.71 +0.1 2,843,746 - Ga0059261_2731 0.71 -0.2 2,843,931 + +0.3 2,843,974 + +0.3 2,843,974 + +1.3 2,843,975 - +0.1 2,844,152 + Ga0059261_2732 0.15 +0.3 2,844,152 + Ga0059261_2732 0.15 +0.1 2,844,153 - +0.3 2,844,153 - Ga0059261_2732 0.15 -0.3 2,844,161 + Ga0059261_2732 0.15 +1.0 2,844,161 + Ga0059261_2732 0.15 -0.3 2,844,161 + Ga0059261_2732 0.15 -0.9 2,844,161 + Ga0059261_2732 0.15 +0.4 2,844,161 + Ga0059261_2732 0.15 +0.5 2,844,161 + Ga0059261_2732 0.15 +0.1 2,844,161 + Ga0059261_2732 0.15 +1.0 2,844,161 + Ga0059261_2732 0.15 -0.1 2,844,161 + Ga0059261_2732 0.15 -0.5 2,844,161 + Ga0059261_2732 0.15 -0.1 2,844,161 + Ga0059261_2732 0.15 +0.3 2,844,161 + Ga0059261_2732 0.15 -0.2 2,844,161 + Ga0059261_2732 0.15 -0.2 2,844,162 - Ga0059261_2732 0.16 +0.0 2,844,162 - Ga0059261_2732 0.16 -0.3 2,844,162 - Ga0059261_2732 0.16 +0.4 2,844,162 - Ga0059261_2732 0.16 -0.3 2,844,162 - Ga0059261_2732 0.16 +0.4 2,844,162 - Ga0059261_2732 0.16 +0.9 2,844,162 - Ga0059261_2732 0.16 -0.2 2,844,162 - Ga0059261_2732 0.16 -0.3 2,844,164 + Ga0059261_2732 0.16 -0.4 2,844,164 + Ga0059261_2732 0.16 -0.5 2,844,164 + Ga0059261_2732 0.16 -0.2 2,844,164 + Ga0059261_2732 0.16 +0.5 2,844,164 + Ga0059261_2732 0.16 +0.9 2,844,164 + Ga0059261_2732 0.16 -0.1 2,844,164 + Ga0059261_2732 0.16 +0.2 2,844,164 + Ga0059261_2732 0.16 +0.3 2,844,164 + Ga0059261_2732 0.16 -0.6 2,844,165 - Ga0059261_2732 0.16 +0.6 2,844,165 - Ga0059261_2732 0.16 +0.9 2,844,165 - Ga0059261_2732 0.16 -0.3 2,844,165 - Ga0059261_2732 0.16 +0.1 2,844,165 - Ga0059261_2732 0.16 +1.0 2,844,165 - Ga0059261_2732 0.16 +0.4 2,844,165 - +1.6 2,844,254 + Ga0059261_2732 0.24 -0.2 2,844,254 + Ga0059261_2732 0.24 +0.3 2,844,254 + Ga0059261_2732 0.24 +0.1 2,844,255 - Ga0059261_2732 0.24 -0.5 2,844,255 - Ga0059261_2732 0.24 -0.3 2,844,255 - Ga0059261_2732 0.24 -0.0 2,844,255 - Ga0059261_2732 0.24 +0.1 2,844,255 - Ga0059261_2732 0.24 -0.0
Or see this region's nucleotide sequence