Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1912 and Ga0059261_1913 overlap by 8 nucleotides Ga0059261_1913 and Ga0059261_1914 overlap by 4 nucleotides Ga0059261_1914 and Ga0059261_1915 are separated by 109 nucleotides Ga0059261_1915 and Ga0059261_1916 are separated by 121 nucleotides
Ga0059261_1912: Ga0059261_1912 - Nitroreductase, at 2,022,972 to 2,023,565
_1912
Ga0059261_1913: Ga0059261_1913 - tRNA threonylcarbamoyl adenosine modification protein YeaZ, at 2,023,558 to 2,024,202
_1913
Ga0059261_1914: Ga0059261_1914 - Acetyltransferases, at 2,024,199 to 2,024,675
_1914
Ga0059261_1915: Ga0059261_1915 - transcriptional regulator, MucR family, at 2,024,785 to 2,025,201
_1915
Ga0059261_1916: Ga0059261_1916 - Fe2+/Zn2+ uptake regulation proteins, at 2,025,323 to 2,025,745
_1916
Position (kb)
2024
2025 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2023.362 kb on + strand, within Ga0059261_1912 at 2023.362 kb on + strand, within Ga0059261_1912 at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.150 kb on - strand at 2024.150 kb on - strand at 2024.150 kb on - strand at 2024.150 kb on - strand at 2024.150 kb on - strand at 2024.571 kb on + strand, within Ga0059261_1914 at 2024.613 kb on + strand, within Ga0059261_1914 at 2024.614 kb on - strand, within Ga0059261_1914 at 2024.614 kb on - strand, within Ga0059261_1914 at 2024.729 kb on - strand at 2024.747 kb on + strand at 2024.748 kb on - strand at 2024.748 kb on - strand at 2024.770 kb on + strand at 2024.771 kb on - strand at 2025.001 kb on + strand, within Ga0059261_1915 at 2025.001 kb on + strand, within Ga0059261_1915 at 2025.001 kb on + strand, within Ga0059261_1915 at 2025.002 kb on - strand, within Ga0059261_1915 at 2025.002 kb on - strand, within Ga0059261_1915 at 2025.002 kb on - strand, within Ga0059261_1915 at 2025.003 kb on + strand, within Ga0059261_1915 at 2025.003 kb on + strand, within Ga0059261_1915 at 2025.003 kb on + strand, within Ga0059261_1915 at 2025.004 kb on - strand, within Ga0059261_1915 at 2025.004 kb on - strand, within Ga0059261_1915 at 2025.025 kb on - strand, within Ga0059261_1915 at 2025.025 kb on - strand, within Ga0059261_1915 at 2025.065 kb on - strand, within Ga0059261_1915 at 2025.085 kb on + strand, within Ga0059261_1915 at 2025.086 kb on - strand, within Ga0059261_1915 at 2025.136 kb on + strand, within Ga0059261_1915 at 2025.136 kb on + strand, within Ga0059261_1915 at 2025.136 kb on + strand, within Ga0059261_1915 at 2025.137 kb on - strand, within Ga0059261_1915 at 2025.137 kb on - strand, within Ga0059261_1915 at 2025.137 kb on - strand, within Ga0059261_1915 at 2025.212 kb on + strand at 2025.212 kb on + strand at 2025.213 kb on - strand at 2025.311 kb on + strand at 2025.311 kb on + strand at 2025.311 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,023,362 + Ga0059261_1912 0.66 +1.0 2,023,362 + Ga0059261_1912 0.66 +0.8 2,024,149 + +1.6 2,024,149 + -0.0 2,024,149 + +0.7 2,024,149 + +0.1 2,024,149 + +0.6 2,024,149 + -0.1 2,024,150 - +0.5 2,024,150 - +0.2 2,024,150 - +0.4 2,024,150 - +0.8 2,024,150 - +0.4 2,024,571 + Ga0059261_1914 0.78 -0.2 2,024,613 + Ga0059261_1914 0.87 +0.6 2,024,614 - Ga0059261_1914 0.87 +0.9 2,024,614 - Ga0059261_1914 0.87 +0.4 2,024,729 - -0.2 2,024,747 + -0.7 2,024,748 - -0.1 2,024,748 - +0.8 2,024,770 + -3.8 2,024,771 - -0.2 2,025,001 + Ga0059261_1915 0.52 +0.1 2,025,001 + Ga0059261_1915 0.52 -0.6 2,025,001 + Ga0059261_1915 0.52 -0.8 2,025,002 - Ga0059261_1915 0.52 -0.1 2,025,002 - Ga0059261_1915 0.52 -0.3 2,025,002 - Ga0059261_1915 0.52 -1.9 2,025,003 + Ga0059261_1915 0.52 +0.4 2,025,003 + Ga0059261_1915 0.52 -0.9 2,025,003 + Ga0059261_1915 0.52 +0.8 2,025,004 - Ga0059261_1915 0.53 -0.2 2,025,004 - Ga0059261_1915 0.53 +1.1 2,025,025 - Ga0059261_1915 0.58 -1.4 2,025,025 - Ga0059261_1915 0.58 +1.0 2,025,065 - Ga0059261_1915 0.67 -0.7 2,025,085 + Ga0059261_1915 0.72 -0.2 2,025,086 - Ga0059261_1915 0.72 -0.1 2,025,136 + Ga0059261_1915 0.84 -0.7 2,025,136 + Ga0059261_1915 0.84 -0.5 2,025,136 + Ga0059261_1915 0.84 -1.1 2,025,137 - Ga0059261_1915 0.84 +0.1 2,025,137 - Ga0059261_1915 0.84 +0.3 2,025,137 - Ga0059261_1915 0.84 -0.6 2,025,212 + -0.0 2,025,212 + -0.4 2,025,213 - +0.2 2,025,311 + -1.0 2,025,311 + -1.7 2,025,311 + -1.5
Or see this region's nucleotide sequence