Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1910 and Ga0059261_1911 are separated by 143 nucleotides Ga0059261_1911 and Ga0059261_1912 overlap by 1 nucleotides Ga0059261_1912 and Ga0059261_1913 overlap by 8 nucleotides Ga0059261_1913 and Ga0059261_1914 overlap by 4 nucleotides
Ga0059261_1910: Ga0059261_1910 - translation initiation factor IF-1, at 2,022,029 to 2,022,247
_1910
Ga0059261_1911: Ga0059261_1911 - Thioredoxin-like proteins and domains, at 2,022,391 to 2,022,972
_1911
Ga0059261_1912: Ga0059261_1912 - Nitroreductase, at 2,022,972 to 2,023,565
_1912
Ga0059261_1913: Ga0059261_1913 - tRNA threonylcarbamoyl adenosine modification protein YeaZ, at 2,023,558 to 2,024,202
_1913
Ga0059261_1914: Ga0059261_1914 - Acetyltransferases, at 2,024,199 to 2,024,675
_1914
Position (kb)
2022
2023
2024 Strain fitness (log2 ratio)
-1
0
1
2 at 2021.980 kb on + strand at 2021.981 kb on - strand at 2021.981 kb on - strand at 2022.853 kb on + strand, within Ga0059261_1911 at 2022.854 kb on - strand, within Ga0059261_1911 at 2022.854 kb on - strand, within Ga0059261_1911 at 2022.854 kb on - strand, within Ga0059261_1911 at 2022.854 kb on - strand, within Ga0059261_1911 at 2022.934 kb on + strand at 2022.934 kb on + strand at 2022.934 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.031 kb on + strand at 2023.038 kb on + strand, within Ga0059261_1912 at 2023.038 kb on + strand, within Ga0059261_1912 at 2023.080 kb on + strand at 2023.080 kb on + strand, within Ga0059261_1912 at 2023.080 kb on + strand, within Ga0059261_1912 at 2023.362 kb on + strand, within Ga0059261_1912 at 2023.362 kb on + strand, within Ga0059261_1912 at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.150 kb on - strand at 2024.150 kb on - strand at 2024.150 kb on - strand at 2024.150 kb on - strand at 2024.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,021,980 + +0.0 2,021,981 - -0.0 2,021,981 - -0.0 2,022,853 + Ga0059261_1911 0.79 -1.2 2,022,854 - Ga0059261_1911 0.80 -0.4 2,022,854 - Ga0059261_1911 0.80 -1.3 2,022,854 - Ga0059261_1911 0.80 -0.5 2,022,854 - Ga0059261_1911 0.80 +0.0 2,022,934 + +0.6 2,022,934 + -0.0 2,022,934 + -1.0 2,023,029 + +0.5 2,023,029 + +0.3 2,023,029 + +0.5 2,023,029 + +0.2 2,023,029 + +0.8 2,023,029 + -0.5 2,023,029 + +1.3 2,023,031 + +2.0 2,023,038 + Ga0059261_1912 0.11 +0.7 2,023,038 + Ga0059261_1912 0.11 -0.4 2,023,080 + -1.2 2,023,080 + Ga0059261_1912 0.18 +0.1 2,023,080 + Ga0059261_1912 0.18 +0.7 2,023,362 + Ga0059261_1912 0.66 +1.0 2,023,362 + Ga0059261_1912 0.66 +0.8 2,024,149 + +1.6 2,024,149 + -0.0 2,024,149 + +0.7 2,024,149 + +0.1 2,024,149 + +0.6 2,024,149 + -0.1 2,024,150 - +0.5 2,024,150 - +0.2 2,024,150 - +0.4 2,024,150 - +0.8 2,024,150 - +0.4
Or see this region's nucleotide sequence