Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1572 and Ga0059261_1573 are separated by 77 nucleotides Ga0059261_1573 and Ga0059261_1574 are separated by 99 nucleotides Ga0059261_1574 and Ga0059261_1575 overlap by 4 nucleotides Ga0059261_1575 and Ga0059261_1576 overlap by 4 nucleotides
Ga0059261_1572: Ga0059261_1572 - FAD/FMN-containing dehydrogenases, at 1,643,068 to 1,644,510
_1572
Ga0059261_1573: Ga0059261_1573 - hypothetical protein, at 1,644,588 to 1,645,064
_1573
Ga0059261_1574: Ga0059261_1574 - Superfamily II DNA and RNA helicases, at 1,645,164 to 1,646,561
_1574
Ga0059261_1575: Ga0059261_1575 - Protein of unknown function (DUF1289), at 1,646,558 to 1,646,761
_1575
Ga0059261_1576: Ga0059261_1576 - 5'-deoxy-5'-methylthioadenosine phosphorylase, at 1,646,758 to 1,647,627
_1576
Position (kb)
1645
1646
1647 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1644.572 kb on + strand at 1644.573 kb on - strand at 1644.573 kb on - strand at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.939 kb on + strand, within Ga0059261_1573 at 1644.940 kb on - strand, within Ga0059261_1573 at 1644.940 kb on - strand, within Ga0059261_1573 at 1644.940 kb on - strand at 1644.940 kb on - strand, within Ga0059261_1573 at 1644.940 kb on - strand, within Ga0059261_1573 at 1644.951 kb on + strand, within Ga0059261_1573 at 1644.952 kb on - strand, within Ga0059261_1573 at 1644.952 kb on - strand, within Ga0059261_1573 at 1645.028 kb on + strand at 1645.029 kb on - strand at 1645.062 kb on + strand at 1645.063 kb on - strand at 1645.084 kb on + strand at 1645.084 kb on + strand at 1645.084 kb on + strand at 1645.085 kb on - strand at 1645.085 kb on - strand at 1646.296 kb on + strand, within Ga0059261_1574 at 1646.296 kb on + strand, within Ga0059261_1574 at 1646.759 kb on + strand at 1646.759 kb on + strand at 1646.760 kb on - strand at 1646.760 kb on - strand at 1646.835 kb on + strand at 1646.836 kb on - strand at 1646.836 kb on - strand at 1646.848 kb on + strand, within Ga0059261_1576 at 1646.849 kb on - strand, within Ga0059261_1576 at 1646.849 kb on - strand, within Ga0059261_1576 at 1646.857 kb on - strand, within Ga0059261_1576 at 1646.857 kb on - strand, within Ga0059261_1576 at 1646.857 kb on - strand, within Ga0059261_1576 at 1646.999 kb on + strand, within Ga0059261_1576 at 1647.000 kb on - strand, within Ga0059261_1576 at 1647.000 kb on - strand, within Ga0059261_1576 at 1647.000 kb on - strand, within Ga0059261_1576 at 1647.000 kb on - strand, within Ga0059261_1576 at 1647.000 kb on - strand, within Ga0059261_1576 at 1647.026 kb on + strand, within Ga0059261_1576 at 1647.027 kb on - strand, within Ga0059261_1576 at 1647.104 kb on + strand, within Ga0059261_1576 at 1647.155 kb on + strand, within Ga0059261_1576 at 1647.155 kb on + strand, within Ga0059261_1576 at 1647.155 kb on + strand, within Ga0059261_1576 at 1647.155 kb on + strand, within Ga0059261_1576 at 1647.156 kb on - strand, within Ga0059261_1576 at 1647.156 kb on - strand, within Ga0059261_1576 at 1647.156 kb on - strand, within Ga0059261_1576 at 1647.156 kb on - strand, within Ga0059261_1576 at 1647.156 kb on - strand, within Ga0059261_1576 at 1647.156 kb on - strand, within Ga0059261_1576 at 1647.156 kb on - strand, within Ga0059261_1576 at 1647.156 kb on - strand, within Ga0059261_1576 at 1647.156 kb on - strand, within Ga0059261_1576 at 1647.159 kb on + strand, within Ga0059261_1576 at 1647.159 kb on + strand, within Ga0059261_1576 at 1647.159 kb on + strand, within Ga0059261_1576 at 1647.159 kb on + strand, within Ga0059261_1576 at 1647.160 kb on - strand, within Ga0059261_1576 at 1647.272 kb on + strand, within Ga0059261_1576 at 1647.272 kb on + strand, within Ga0059261_1576 at 1647.272 kb on + strand, within Ga0059261_1576 at 1647.272 kb on + strand, within Ga0059261_1576 at 1647.272 kb on + strand, within Ga0059261_1576 at 1647.272 kb on + strand, within Ga0059261_1576 at 1647.273 kb on - strand, within Ga0059261_1576 at 1647.273 kb on - strand, within Ga0059261_1576 at 1647.273 kb on - strand, within Ga0059261_1576 at 1647.273 kb on - strand, within Ga0059261_1576 at 1647.331 kb on - strand, within Ga0059261_1576
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,644,572 + +0.0 1,644,573 - -0.8 1,644,573 - -1.0 1,644,939 + Ga0059261_1573 0.74 -2.9 1,644,939 + Ga0059261_1573 0.74 -3.7 1,644,939 + Ga0059261_1573 0.74 -0.3 1,644,939 + Ga0059261_1573 0.74 -2.7 1,644,939 + Ga0059261_1573 0.74 -1.7 1,644,939 + Ga0059261_1573 0.74 -0.1 1,644,939 + Ga0059261_1573 0.74 -1.7 1,644,939 + Ga0059261_1573 0.74 -0.9 1,644,939 + Ga0059261_1573 0.74 +0.5 1,644,940 - Ga0059261_1573 0.74 -3.2 1,644,940 - Ga0059261_1573 0.74 -1.5 1,644,940 - -0.5 1,644,940 - Ga0059261_1573 0.74 -2.7 1,644,940 - Ga0059261_1573 0.74 -1.5 1,644,951 + Ga0059261_1573 0.76 -1.2 1,644,952 - Ga0059261_1573 0.76 -1.8 1,644,952 - Ga0059261_1573 0.76 -2.2 1,645,028 + -1.7 1,645,029 - -1.9 1,645,062 + +0.1 1,645,063 - +0.7 1,645,084 + -1.0 1,645,084 + -0.3 1,645,084 + -0.9 1,645,085 - +0.4 1,645,085 - +0.4 1,646,296 + Ga0059261_1574 0.81 +0.2 1,646,296 + Ga0059261_1574 0.81 +0.3 1,646,759 + -0.6 1,646,759 + +0.1 1,646,760 - +0.3 1,646,760 - +0.4 1,646,835 + -0.4 1,646,836 - +0.3 1,646,836 - +0.3 1,646,848 + Ga0059261_1576 0.10 -0.3 1,646,849 - Ga0059261_1576 0.10 +0.1 1,646,849 - Ga0059261_1576 0.10 -1.1 1,646,857 - Ga0059261_1576 0.11 +0.3 1,646,857 - Ga0059261_1576 0.11 -0.3 1,646,857 - Ga0059261_1576 0.11 -1.6 1,646,999 + Ga0059261_1576 0.28 -0.8 1,647,000 - Ga0059261_1576 0.28 -0.2 1,647,000 - Ga0059261_1576 0.28 -0.0 1,647,000 - Ga0059261_1576 0.28 +0.2 1,647,000 - Ga0059261_1576 0.28 -0.2 1,647,000 - Ga0059261_1576 0.28 +0.6 1,647,026 + Ga0059261_1576 0.31 +0.2 1,647,027 - Ga0059261_1576 0.31 +0.0 1,647,104 + Ga0059261_1576 0.40 -0.6 1,647,155 + Ga0059261_1576 0.46 -0.6 1,647,155 + Ga0059261_1576 0.46 +0.4 1,647,155 + Ga0059261_1576 0.46 -0.1 1,647,155 + Ga0059261_1576 0.46 -0.0 1,647,156 - Ga0059261_1576 0.46 +0.7 1,647,156 - Ga0059261_1576 0.46 -0.6 1,647,156 - Ga0059261_1576 0.46 +1.0 1,647,156 - Ga0059261_1576 0.46 -0.1 1,647,156 - Ga0059261_1576 0.46 +0.0 1,647,156 - Ga0059261_1576 0.46 -0.4 1,647,156 - Ga0059261_1576 0.46 -0.3 1,647,156 - Ga0059261_1576 0.46 -0.5 1,647,156 - Ga0059261_1576 0.46 +0.4 1,647,159 + Ga0059261_1576 0.46 -0.2 1,647,159 + Ga0059261_1576 0.46 +0.7 1,647,159 + Ga0059261_1576 0.46 -0.8 1,647,159 + Ga0059261_1576 0.46 +0.3 1,647,160 - Ga0059261_1576 0.46 -0.5 1,647,272 + Ga0059261_1576 0.59 +1.1 1,647,272 + Ga0059261_1576 0.59 -0.3 1,647,272 + Ga0059261_1576 0.59 +0.2 1,647,272 + Ga0059261_1576 0.59 -0.0 1,647,272 + Ga0059261_1576 0.59 -0.1 1,647,272 + Ga0059261_1576 0.59 -0.3 1,647,273 - Ga0059261_1576 0.59 +1.0 1,647,273 - Ga0059261_1576 0.59 -0.2 1,647,273 - Ga0059261_1576 0.59 +0.3 1,647,273 - Ga0059261_1576 0.59 -0.4 1,647,331 - Ga0059261_1576 0.66 -0.0
Or see this region's nucleotide sequence