Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1437 and Ga0059261_1438 are separated by 6 nucleotides Ga0059261_1438 and Ga0059261_1439 overlap by 4 nucleotides Ga0059261_1439 and Ga0059261_1440 are separated by 28 nucleotides
Ga0059261_1437: Ga0059261_1437 - hypothetical protein, at 1,517,809 to 1,518,324
_1437
Ga0059261_1438: Ga0059261_1438 - Membrane proteins related to metalloendopeptidases, at 1,518,331 to 1,519,212
_1438
Ga0059261_1439: Ga0059261_1439 - Uncharacterized protein conserved in bacteria, at 1,519,209 to 1,519,412
_1439
Ga0059261_1440: Ga0059261_1440 - Exodeoxyribonuclease VII large subunit (EC 3.1.11.6), at 1,519,441 to 1,520,820
_1440
Position (kb)
1519
1520 Strain fitness (log2 ratio)
-1
0
1
2 at 1518.238 kb on + strand, within Ga0059261_1437 at 1518.239 kb on - strand, within Ga0059261_1437 at 1518.239 kb on - strand, within Ga0059261_1437 at 1518.239 kb on - strand, within Ga0059261_1437 at 1518.239 kb on - strand, within Ga0059261_1437 at 1518.271 kb on + strand, within Ga0059261_1437 at 1518.271 kb on + strand, within Ga0059261_1437 at 1518.271 kb on + strand, within Ga0059261_1437 at 1518.271 kb on + strand at 1518.271 kb on + strand, within Ga0059261_1437 at 1518.271 kb on + strand, within Ga0059261_1437 at 1518.271 kb on + strand at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.272 kb on - strand, within Ga0059261_1437 at 1518.659 kb on + strand, within Ga0059261_1438 at 1518.659 kb on + strand, within Ga0059261_1438 at 1518.659 kb on + strand, within Ga0059261_1438 at 1518.659 kb on + strand, within Ga0059261_1438 at 1518.680 kb on + strand, within Ga0059261_1438 at 1518.680 kb on + strand, within Ga0059261_1438 at 1518.840 kb on + strand, within Ga0059261_1438 at 1518.840 kb on + strand, within Ga0059261_1438 at 1518.852 kb on + strand, within Ga0059261_1438 at 1518.852 kb on + strand, within Ga0059261_1438 at 1518.852 kb on + strand, within Ga0059261_1438 at 1518.852 kb on + strand, within Ga0059261_1438 at 1519.252 kb on + strand, within Ga0059261_1439 at 1519.252 kb on + strand, within Ga0059261_1439 at 1519.252 kb on + strand, within Ga0059261_1439 at 1519.252 kb on + strand, within Ga0059261_1439 at 1519.252 kb on + strand, within Ga0059261_1439 at 1519.252 kb on + strand, within Ga0059261_1439 at 1519.253 kb on - strand, within Ga0059261_1439 at 1519.253 kb on - strand, within Ga0059261_1439 at 1519.280 kb on - strand, within Ga0059261_1439 at 1519.280 kb on - strand, within Ga0059261_1439 at 1519.348 kb on - strand, within Ga0059261_1439 at 1519.367 kb on + strand, within Ga0059261_1439 at 1519.368 kb on - strand, within Ga0059261_1439 at 1519.368 kb on - strand, within Ga0059261_1439 at 1519.368 kb on - strand, within Ga0059261_1439 at 1519.368 kb on - strand, within Ga0059261_1439 at 1519.368 kb on - strand, within Ga0059261_1439 at 1519.369 kb on + strand, within Ga0059261_1439 at 1519.369 kb on + strand, within Ga0059261_1439 at 1519.369 kb on + strand, within Ga0059261_1439 at 1519.369 kb on + strand, within Ga0059261_1439 at 1519.369 kb on + strand, within Ga0059261_1439 at 1519.369 kb on + strand, within Ga0059261_1439 at 1519.369 kb on + strand, within Ga0059261_1439 at 1519.370 kb on - strand, within Ga0059261_1439 at 1519.370 kb on - strand, within Ga0059261_1439 at 1519.370 kb on - strand, within Ga0059261_1439 at 1519.370 kb on - strand, within Ga0059261_1439 at 1519.370 kb on - strand, within Ga0059261_1439 at 1519.370 kb on - strand, within Ga0059261_1439 at 1519.431 kb on + strand at 1519.478 kb on + strand at 1519.478 kb on + strand at 1519.479 kb on - strand at 1519.479 kb on - strand at 1519.482 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,518,238 + Ga0059261_1437 0.83 -1.0 1,518,239 - Ga0059261_1437 0.83 +0.1 1,518,239 - Ga0059261_1437 0.83 +0.8 1,518,239 - Ga0059261_1437 0.83 +0.9 1,518,239 - Ga0059261_1437 0.83 -0.5 1,518,271 + Ga0059261_1437 0.90 +0.7 1,518,271 + Ga0059261_1437 0.90 -0.4 1,518,271 + Ga0059261_1437 0.90 -0.0 1,518,271 + -0.8 1,518,271 + Ga0059261_1437 0.90 -0.7 1,518,271 + Ga0059261_1437 0.90 +0.3 1,518,271 + +0.9 1,518,272 - Ga0059261_1437 0.90 +0.9 1,518,272 - Ga0059261_1437 0.90 +0.9 1,518,272 - Ga0059261_1437 0.90 -0.9 1,518,272 - Ga0059261_1437 0.90 +0.4 1,518,272 - Ga0059261_1437 0.90 +0.1 1,518,272 - Ga0059261_1437 0.90 +0.0 1,518,272 - Ga0059261_1437 0.90 +0.8 1,518,272 - Ga0059261_1437 0.90 +0.0 1,518,272 - Ga0059261_1437 0.90 +0.6 1,518,272 - Ga0059261_1437 0.90 -0.5 1,518,272 - Ga0059261_1437 0.90 +0.1 1,518,272 - Ga0059261_1437 0.90 -0.3 1,518,272 - Ga0059261_1437 0.90 +0.1 1,518,272 - Ga0059261_1437 0.90 +0.2 1,518,272 - Ga0059261_1437 0.90 +0.6 1,518,272 - Ga0059261_1437 0.90 +0.0 1,518,659 + Ga0059261_1438 0.37 -1.5 1,518,659 + Ga0059261_1438 0.37 -0.5 1,518,659 + Ga0059261_1438 0.37 +0.6 1,518,659 + Ga0059261_1438 0.37 -0.5 1,518,680 + Ga0059261_1438 0.40 +0.3 1,518,680 + Ga0059261_1438 0.40 +0.0 1,518,840 + Ga0059261_1438 0.58 -0.4 1,518,840 + Ga0059261_1438 0.58 -0.2 1,518,852 + Ga0059261_1438 0.59 +0.5 1,518,852 + Ga0059261_1438 0.59 -0.4 1,518,852 + Ga0059261_1438 0.59 -0.5 1,518,852 + Ga0059261_1438 0.59 +0.4 1,519,252 + Ga0059261_1439 0.21 -0.1 1,519,252 + Ga0059261_1439 0.21 +0.3 1,519,252 + Ga0059261_1439 0.21 +0.2 1,519,252 + Ga0059261_1439 0.21 -0.6 1,519,252 + Ga0059261_1439 0.21 +0.5 1,519,252 + Ga0059261_1439 0.21 +0.2 1,519,253 - Ga0059261_1439 0.22 +0.4 1,519,253 - Ga0059261_1439 0.22 +1.1 1,519,280 - Ga0059261_1439 0.35 -0.2 1,519,280 - Ga0059261_1439 0.35 +0.2 1,519,348 - Ga0059261_1439 0.68 +0.7 1,519,367 + Ga0059261_1439 0.77 -0.6 1,519,368 - Ga0059261_1439 0.78 +0.3 1,519,368 - Ga0059261_1439 0.78 -0.1 1,519,368 - Ga0059261_1439 0.78 -0.3 1,519,368 - Ga0059261_1439 0.78 +0.1 1,519,368 - Ga0059261_1439 0.78 -0.2 1,519,369 + Ga0059261_1439 0.78 -0.2 1,519,369 + Ga0059261_1439 0.78 -0.3 1,519,369 + Ga0059261_1439 0.78 +0.6 1,519,369 + Ga0059261_1439 0.78 -0.1 1,519,369 + Ga0059261_1439 0.78 +1.9 1,519,369 + Ga0059261_1439 0.78 +0.7 1,519,369 + Ga0059261_1439 0.78 +0.2 1,519,370 - Ga0059261_1439 0.79 +0.2 1,519,370 - Ga0059261_1439 0.79 -0.2 1,519,370 - Ga0059261_1439 0.79 +0.5 1,519,370 - Ga0059261_1439 0.79 +1.1 1,519,370 - Ga0059261_1439 0.79 -0.4 1,519,370 - Ga0059261_1439 0.79 +0.3 1,519,431 + -0.3 1,519,478 + -0.0 1,519,478 + +0.2 1,519,479 - -0.3 1,519,479 - -0.8 1,519,482 - +0.2
Or see this region's nucleotide sequence