Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1412 and Ga0059261_1413 are separated by 64 nucleotides Ga0059261_1413 and Ga0059261_1414 overlap by 4 nucleotides Ga0059261_1414 and Ga0059261_1415 are separated by 154 nucleotides
Ga0059261_1412: Ga0059261_1412 - DNA polymerase III, beta subunit, at 1,486,899 to 1,488,002
_1412
Ga0059261_1413: Ga0059261_1413 - Uncharacterized protein involved in ubiquinone biosynthesis, at 1,488,067 to 1,488,888
_1413
Ga0059261_1414: Ga0059261_1414 - Uncharacterized proteins, homologs of microcin C7 resistance protein MccF, at 1,488,885 to 1,489,700
_1414
Ga0059261_1415: Ga0059261_1415 - UDP-N-acetylmuramate-alanine ligase, at 1,489,855 to 1,491,264
_1415
Position (kb)
1488
1489
1490 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1488.014 kb on + strand at 1488.014 kb on + strand at 1488.014 kb on + strand at 1488.014 kb on + strand at 1488.014 kb on + strand at 1488.015 kb on - strand at 1488.015 kb on - strand at 1488.245 kb on + strand, within Ga0059261_1413 at 1488.246 kb on - strand, within Ga0059261_1413 at 1488.246 kb on - strand, within Ga0059261_1413 at 1488.292 kb on + strand, within Ga0059261_1413 at 1488.293 kb on - strand, within Ga0059261_1413 at 1488.293 kb on - strand at 1488.293 kb on - strand, within Ga0059261_1413 at 1488.334 kb on + strand, within Ga0059261_1413 at 1488.334 kb on + strand, within Ga0059261_1413 at 1488.335 kb on - strand, within Ga0059261_1413 at 1488.335 kb on - strand, within Ga0059261_1413 at 1488.335 kb on - strand, within Ga0059261_1413 at 1488.472 kb on + strand, within Ga0059261_1413 at 1488.473 kb on - strand, within Ga0059261_1413 at 1488.473 kb on - strand, within Ga0059261_1413 at 1488.571 kb on + strand, within Ga0059261_1413 at 1488.572 kb on - strand, within Ga0059261_1413 at 1488.619 kb on + strand, within Ga0059261_1413 at 1488.619 kb on + strand, within Ga0059261_1413 at 1488.620 kb on - strand, within Ga0059261_1413 at 1488.620 kb on - strand, within Ga0059261_1413 at 1488.769 kb on + strand, within Ga0059261_1413 at 1488.769 kb on + strand, within Ga0059261_1413 at 1488.769 kb on + strand, within Ga0059261_1413 at 1488.769 kb on + strand, within Ga0059261_1413 at 1488.769 kb on + strand, within Ga0059261_1413 at 1488.770 kb on - strand, within Ga0059261_1413 at 1488.770 kb on - strand, within Ga0059261_1413 at 1488.770 kb on - strand, within Ga0059261_1413 at 1488.770 kb on - strand, within Ga0059261_1413 at 1488.770 kb on - strand, within Ga0059261_1413 at 1488.784 kb on + strand, within Ga0059261_1413 at 1488.785 kb on - strand, within Ga0059261_1413 at 1488.838 kb on + strand at 1488.839 kb on - strand at 1488.839 kb on - strand at 1488.886 kb on + strand at 1488.886 kb on + strand at 1488.887 kb on - strand at 1488.949 kb on + strand at 1488.950 kb on - strand at 1488.950 kb on - strand at 1488.950 kb on - strand at 1488.950 kb on - strand at 1489.115 kb on - strand, within Ga0059261_1414 at 1489.366 kb on + strand, within Ga0059261_1414 at 1489.366 kb on + strand, within Ga0059261_1414 at 1489.366 kb on + strand at 1489.406 kb on + strand, within Ga0059261_1414 at 1489.408 kb on + strand, within Ga0059261_1414 at 1489.408 kb on + strand, within Ga0059261_1414 at 1489.408 kb on + strand, within Ga0059261_1414 at 1489.408 kb on + strand, within Ga0059261_1414 at 1489.408 kb on + strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.409 kb on - strand, within Ga0059261_1414 at 1489.618 kb on + strand, within Ga0059261_1414 at 1489.618 kb on + strand, within Ga0059261_1414 at 1489.619 kb on - strand at 1489.764 kb on + strand at 1489.764 kb on + strand at 1489.765 kb on - strand at 1489.765 kb on - strand at 1489.769 kb on + strand at 1489.769 kb on + strand at 1489.769 kb on + strand at 1489.769 kb on + strand at 1489.769 kb on + strand at 1489.769 kb on + strand at 1489.769 kb on + strand at 1489.769 kb on + strand at 1489.769 kb on + strand at 1489.769 kb on + strand at 1489.770 kb on - strand at 1489.770 kb on - strand at 1489.770 kb on - strand at 1489.770 kb on - strand at 1489.770 kb on - strand at 1489.770 kb on - strand at 1489.770 kb on - strand at 1489.770 kb on - strand at 1490.357 kb on - strand, within Ga0059261_1415 at 1490.398 kb on + strand, within Ga0059261_1415 at 1490.398 kb on + strand, within Ga0059261_1415 at 1490.399 kb on - strand, within Ga0059261_1415 at 1490.399 kb on - strand, within Ga0059261_1415
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,488,014 + +0.1 1,488,014 + -0.1 1,488,014 + -0.3 1,488,014 + +0.9 1,488,014 + +0.4 1,488,015 - +0.2 1,488,015 - +0.3 1,488,245 + Ga0059261_1413 0.22 -0.3 1,488,246 - Ga0059261_1413 0.22 +0.2 1,488,246 - Ga0059261_1413 0.22 +0.4 1,488,292 + Ga0059261_1413 0.27 +0.6 1,488,293 - Ga0059261_1413 0.27 +0.7 1,488,293 - +1.1 1,488,293 - Ga0059261_1413 0.27 +0.4 1,488,334 + Ga0059261_1413 0.32 +0.0 1,488,334 + Ga0059261_1413 0.32 +0.0 1,488,335 - Ga0059261_1413 0.33 -0.1 1,488,335 - Ga0059261_1413 0.33 +0.5 1,488,335 - Ga0059261_1413 0.33 +0.4 1,488,472 + Ga0059261_1413 0.49 +0.5 1,488,473 - Ga0059261_1413 0.49 -0.0 1,488,473 - Ga0059261_1413 0.49 -0.1 1,488,571 + Ga0059261_1413 0.61 +0.6 1,488,572 - Ga0059261_1413 0.61 -4.1 1,488,619 + Ga0059261_1413 0.67 -0.1 1,488,619 + Ga0059261_1413 0.67 +0.7 1,488,620 - Ga0059261_1413 0.67 +1.3 1,488,620 - Ga0059261_1413 0.67 +0.0 1,488,769 + Ga0059261_1413 0.85 +0.0 1,488,769 + Ga0059261_1413 0.85 +0.3 1,488,769 + Ga0059261_1413 0.85 -0.6 1,488,769 + Ga0059261_1413 0.85 -0.5 1,488,769 + Ga0059261_1413 0.85 -0.9 1,488,770 - Ga0059261_1413 0.86 -0.2 1,488,770 - Ga0059261_1413 0.86 -0.9 1,488,770 - Ga0059261_1413 0.86 +0.5 1,488,770 - Ga0059261_1413 0.86 +0.2 1,488,770 - Ga0059261_1413 0.86 -0.5 1,488,784 + Ga0059261_1413 0.87 +0.8 1,488,785 - Ga0059261_1413 0.87 -0.3 1,488,838 + -0.2 1,488,839 - +0.2 1,488,839 - -0.4 1,488,886 + -0.1 1,488,886 + -0.1 1,488,887 - -1.1 1,488,949 + +0.5 1,488,950 - +2.1 1,488,950 - +0.6 1,488,950 - +0.4 1,488,950 - +0.7 1,489,115 - Ga0059261_1414 0.28 -0.8 1,489,366 + Ga0059261_1414 0.59 +1.6 1,489,366 + Ga0059261_1414 0.59 +1.0 1,489,366 + +0.5 1,489,406 + Ga0059261_1414 0.64 +0.2 1,489,408 + Ga0059261_1414 0.64 +0.1 1,489,408 + Ga0059261_1414 0.64 +0.5 1,489,408 + Ga0059261_1414 0.64 -0.1 1,489,408 + Ga0059261_1414 0.64 +0.9 1,489,408 + Ga0059261_1414 0.64 +1.5 1,489,409 - Ga0059261_1414 0.64 +2.3 1,489,409 - Ga0059261_1414 0.64 +0.1 1,489,409 - Ga0059261_1414 0.64 +0.8 1,489,409 - Ga0059261_1414 0.64 +1.2 1,489,409 - Ga0059261_1414 0.64 +0.6 1,489,409 - Ga0059261_1414 0.64 -1.8 1,489,409 - Ga0059261_1414 0.64 +0.3 1,489,409 - Ga0059261_1414 0.64 +0.6 1,489,409 - Ga0059261_1414 0.64 +1.0 1,489,409 - Ga0059261_1414 0.64 +0.4 1,489,409 - Ga0059261_1414 0.64 +1.6 1,489,409 - Ga0059261_1414 0.64 +0.3 1,489,409 - Ga0059261_1414 0.64 +0.2 1,489,618 + Ga0059261_1414 0.90 +0.2 1,489,618 + Ga0059261_1414 0.90 +0.2 1,489,619 - +0.2 1,489,764 + +0.0 1,489,764 + -0.1 1,489,765 - -0.2 1,489,765 - +0.3 1,489,769 + -0.1 1,489,769 + +0.2 1,489,769 + +0.3 1,489,769 + -0.5 1,489,769 + -0.2 1,489,769 + +0.1 1,489,769 + -0.2 1,489,769 + +0.4 1,489,769 + -0.5 1,489,769 + +1.1 1,489,770 - +2.9 1,489,770 - -0.6 1,489,770 - -0.3 1,489,770 - -0.3 1,489,770 - -0.3 1,489,770 - -0.0 1,489,770 - +0.3 1,489,770 - -0.8 1,490,357 - Ga0059261_1415 0.36 -0.3 1,490,398 + Ga0059261_1415 0.39 +0.1 1,490,398 + Ga0059261_1415 0.39 +0.4 1,490,399 - Ga0059261_1415 0.39 -1.6 1,490,399 - Ga0059261_1415 0.39 -0.6
Or see this region's nucleotide sequence