Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1212 and Ga0059261_1213 are separated by 66 nucleotides Ga0059261_1213 and Ga0059261_1214 are separated by 368 nucleotides Ga0059261_1214 and Ga0059261_1215 are separated by 129 nucleotides
Ga0059261_1212: Ga0059261_1212 - Outer membrane protein, at 1,267,435 to 1,268,673
_1212
Ga0059261_1213: Ga0059261_1213 - hypothetical protein, at 1,268,740 to 1,269,123
_1213
Ga0059261_1214: Ga0059261_1214 - hypothetical protein, at 1,269,492 to 1,269,989
_1214
Ga0059261_1215: Ga0059261_1215 - Transposase DDE domain group 1, at 1,270,119 to 1,271,489
_1215
Position (kb)
1269
1270 Strain fitness (log2 ratio)
-1
0
1 at 1268.669 kb on + strand at 1268.669 kb on + strand at 1268.669 kb on + strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.840 kb on - strand, within Ga0059261_1213 at 1269.015 kb on + strand, within Ga0059261_1213 at 1269.015 kb on + strand, within Ga0059261_1213 at 1269.016 kb on - strand, within Ga0059261_1213 at 1269.135 kb on + strand at 1269.136 kb on - strand at 1269.148 kb on - strand at 1269.148 kb on - strand at 1269.151 kb on + strand at 1269.152 kb on - strand at 1269.152 kb on - strand at 1269.152 kb on - strand at 1269.165 kb on + strand at 1269.165 kb on + strand at 1269.169 kb on + strand at 1269.169 kb on + strand at 1269.170 kb on - strand at 1269.178 kb on + strand at 1269.194 kb on + strand at 1269.195 kb on - strand at 1269.195 kb on - strand at 1269.241 kb on - strand at 1269.285 kb on - strand at 1269.285 kb on - strand at 1269.285 kb on - strand at 1269.285 kb on - strand at 1269.285 kb on - strand at 1269.293 kb on - strand at 1269.293 kb on - strand at 1269.928 kb on + strand, within Ga0059261_1214
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,268,669 + +0.5 1,268,669 + -0.5 1,268,669 + -0.0 1,268,670 - +0.5 1,268,670 - -0.3 1,268,670 - +0.5 1,268,670 - +0.0 1,268,670 - -0.6 1,268,670 - +0.7 1,268,670 - -0.4 1,268,840 - Ga0059261_1213 0.26 -0.3 1,269,015 + Ga0059261_1213 0.72 -0.3 1,269,015 + Ga0059261_1213 0.72 -0.9 1,269,016 - Ga0059261_1213 0.72 -0.3 1,269,135 + +0.5 1,269,136 - +0.2 1,269,148 - -0.0 1,269,148 - -0.5 1,269,151 + -0.5 1,269,152 - +0.7 1,269,152 - -0.1 1,269,152 - +0.5 1,269,165 + +0.9 1,269,165 + +0.2 1,269,169 + -0.4 1,269,169 + +0.8 1,269,170 - -0.0 1,269,178 + +0.3 1,269,194 + +0.2 1,269,195 - +0.0 1,269,195 - +0.3 1,269,241 - -0.2 1,269,285 - +0.2 1,269,285 - +0.0 1,269,285 - +0.9 1,269,285 - +0.1 1,269,285 - -0.3 1,269,293 - -0.5 1,269,293 - +0.7 1,269,928 + Ga0059261_1214 0.88 +0.3
Or see this region's nucleotide sequence