Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0873 and Ga0059261_0874 are separated by 160 nucleotides Ga0059261_0874 and Ga0059261_0875 are separated by 39 nucleotides Ga0059261_0875 and Ga0059261_0876 are separated by 291 nucleotides
Ga0059261_0873: Ga0059261_0873 - nucleoside diphosphate kinase (EC 2.7.4.6), at 912,867 to 913,289
_0873
Ga0059261_0874: Ga0059261_0874 - DNA polymerase III, chi subunit (EC 2.7.7.7), at 913,450 to 913,890
_0874
Ga0059261_0875: Ga0059261_0875 - Leucyl aminopeptidase, at 913,930 to 915,405
_0875
Ga0059261_0876: Ga0059261_0876 - Organic solvent tolerance protein OstA, at 915,697 to 918,006
_0876
Position (kb)
913
914
915
916 Strain fitness (log2 ratio)
-2
-1
0
1 at 913.311 kb on - strand at 913.336 kb on - strand at 913.336 kb on - strand at 913.336 kb on - strand at 913.403 kb on - strand at 913.403 kb on - strand at 913.403 kb on - strand at 913.403 kb on - strand at 913.440 kb on + strand at 913.440 kb on + strand at 913.440 kb on + strand at 913.440 kb on + strand at 913.441 kb on - strand at 913.441 kb on - strand at 913.441 kb on - strand at 913.451 kb on + strand at 913.451 kb on + strand at 913.451 kb on + strand at 913.451 kb on + strand at 913.452 kb on - strand at 913.452 kb on - strand at 913.452 kb on - strand at 914.001 kb on - strand at 914.001 kb on - strand at 914.001 kb on - strand at 914.001 kb on - strand at 914.001 kb on - strand at 914.169 kb on - strand, within Ga0059261_0875 at 914.169 kb on - strand, within Ga0059261_0875 at 914.916 kb on - strand, within Ga0059261_0875 at 915.452 kb on - strand at 915.452 kb on - strand at 915.452 kb on - strand at 915.480 kb on + strand at 915.480 kb on + strand at 915.481 kb on - strand at 915.481 kb on - strand at 915.481 kb on - strand at 915.481 kb on - strand at 915.692 kb on + strand at 915.692 kb on + strand at 915.693 kb on - strand at 915.693 kb on - strand at 915.705 kb on + strand at 915.748 kb on + strand at 915.748 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 913,311 - -0.4 913,336 - +0.7 913,336 - +0.4 913,336 - -0.5 913,403 - +0.2 913,403 - -0.2 913,403 - -0.2 913,403 - +0.1 913,440 + -0.5 913,440 + +0.1 913,440 + +0.4 913,440 + -0.1 913,441 - +0.3 913,441 - -1.0 913,441 - +1.4 913,451 + -0.2 913,451 + +0.1 913,451 + +0.6 913,451 + -0.3 913,452 - +0.8 913,452 - +0.2 913,452 - +0.2 914,001 - +0.9 914,001 - +1.4 914,001 - -0.1 914,001 - +1.0 914,001 - +0.3 914,169 - Ga0059261_0875 0.16 +0.9 914,169 - Ga0059261_0875 0.16 -0.3 914,916 - Ga0059261_0875 0.67 -0.4 915,452 - -0.0 915,452 - -0.1 915,452 - -0.3 915,480 + -0.5 915,480 + -1.0 915,481 - +0.7 915,481 - -0.5 915,481 - +0.1 915,481 - -0.3 915,692 + +0.2 915,692 + +0.4 915,693 - -2.0 915,693 - -0.9 915,705 + -0.6 915,748 + -2.7 915,748 + -0.4
Or see this region's nucleotide sequence