Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_0743

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGa0059261_0741 and Ga0059261_0742 are separated by 16 nucleotidesGa0059261_0742 and Ga0059261_0743 overlap by 4 nucleotidesGa0059261_0743 and Ga0059261_0744 overlap by 1 nucleotidesGa0059261_0744 and Ga0059261_0745 overlap by 4 nucleotides Ga0059261_0741: Ga0059261_0741 - Domain of unknown function (DUF4403), at 770,758 to 772,281 _0741 Ga0059261_0742: Ga0059261_0742 - Uncharacterized small membrane protein, at 772,298 to 772,627 _0742 Ga0059261_0743: Ga0059261_0743 - Kef-type K+ transport systems, membrane components, at 772,624 to 774,441 _0743 Ga0059261_0744: Ga0059261_0744 - NifU homolog involved in Fe-S cluster formation, at 774,441 to 774,875 _0744 Ga0059261_0745: Ga0059261_0745 - Uncharacterized membrane protein, required for colicin V production, at 774,872 to 775,447 _0745 Position (kb) 772 773 774 775Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 771.795 kb on + strand, within Ga0059261_0741at 771.795 kb on + strand, within Ga0059261_0741at 771.795 kb on + strand, within Ga0059261_0741at 771.795 kb on + strand, within Ga0059261_0741at 771.795 kb on + strand, within Ga0059261_0741at 771.795 kb on + strand, within Ga0059261_0741at 771.795 kb on + strand, within Ga0059261_0741at 771.795 kb on + strand, within Ga0059261_0741at 771.796 kb on - strand, within Ga0059261_0741at 771.796 kb on - strand, within Ga0059261_0741at 771.796 kb on - strand, within Ga0059261_0741at 771.796 kb on - strand, within Ga0059261_0741at 771.797 kb on + strand, within Ga0059261_0741at 771.797 kb on + strand, within Ga0059261_0741at 771.798 kb on - strand, within Ga0059261_0741at 771.798 kb on - strand, within Ga0059261_0741at 771.909 kb on + strand, within Ga0059261_0741at 771.981 kb on + strand, within Ga0059261_0741at 771.982 kb on - strandat 771.982 kb on - strand, within Ga0059261_0741at 772.021 kb on - strand, within Ga0059261_0741at 772.084 kb on + strand, within Ga0059261_0741at 772.085 kb on - strand, within Ga0059261_0741at 772.085 kb on - strand, within Ga0059261_0741at 772.249 kb on + strandat 772.250 kb on - strandat 772.250 kb on - strandat 772.250 kb on - strandat 772.250 kb on - strandat 772.250 kb on - strandat 772.325 kb on + strandat 772.325 kb on + strandat 772.326 kb on - strandat 772.326 kb on - strandat 772.326 kb on - strandat 772.326 kb on - strandat 772.404 kb on + strand, within Ga0059261_0742at 772.404 kb on + strand, within Ga0059261_0742at 772.404 kb on + strandat 772.404 kb on + strand, within Ga0059261_0742at 772.405 kb on - strand, within Ga0059261_0742at 772.405 kb on - strand, within Ga0059261_0742at 772.405 kb on - strand, within Ga0059261_0742at 772.405 kb on - strand, within Ga0059261_0742at 772.509 kb on + strand, within Ga0059261_0742at 772.509 kb on + strand, within Ga0059261_0742at 772.510 kb on - strand, within Ga0059261_0742at 772.510 kb on - strand, within Ga0059261_0742at 772.510 kb on - strand, within Ga0059261_0742at 772.510 kb on - strand, within Ga0059261_0742at 772.510 kb on - strand, within Ga0059261_0742at 772.510 kb on - strand, within Ga0059261_0742at 772.781 kb on + strandat 772.929 kb on - strand, within Ga0059261_0743at 772.929 kb on - strand, within Ga0059261_0743at 773.081 kb on + strand, within Ga0059261_0743at 773.081 kb on + strand, within Ga0059261_0743at 773.084 kb on + strand, within Ga0059261_0743at 773.084 kb on + strand, within Ga0059261_0743at 773.085 kb on - strand, within Ga0059261_0743at 773.085 kb on - strand, within Ga0059261_0743at 773.085 kb on - strand, within Ga0059261_0743at 773.085 kb on - strand, within Ga0059261_0743at 773.085 kb on - strand, within Ga0059261_0743at 773.085 kb on - strand, within Ga0059261_0743at 773.085 kb on - strand, within Ga0059261_0743at 773.085 kb on - strand, within Ga0059261_0743at 773.124 kb on - strand, within Ga0059261_0743at 773.819 kb on + strand, within Ga0059261_0743at 773.819 kb on + strand, within Ga0059261_0743at 773.819 kb on + strand, within Ga0059261_0743at 773.819 kb on + strand, within Ga0059261_0743at 773.819 kb on + strand, within Ga0059261_0743at 773.820 kb on - strand, within Ga0059261_0743at 773.820 kb on - strand, within Ga0059261_0743at 773.861 kb on + strand, within Ga0059261_0743at 773.861 kb on + strand, within Ga0059261_0743at 773.861 kb on + strand, within Ga0059261_0743at 773.861 kb on + strand, within Ga0059261_0743at 773.861 kb on + strand, within Ga0059261_0743at 773.861 kb on + strand, within Ga0059261_0743at 773.861 kb on + strand, within Ga0059261_0743at 773.862 kb on - strand, within Ga0059261_0743at 773.862 kb on - strand, within Ga0059261_0743at 773.862 kb on - strand, within Ga0059261_0743at 773.862 kb on - strand, within Ga0059261_0743at 774.324 kb on - strandat 774.398 kb on + strandat 774.408 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.410 kb on + strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.411 kb on - strandat 774.450 kb on + strandat 774.450 kb on + strandat 774.450 kb on + strandat 774.450 kb on + strandat 774.450 kb on + strandat 774.450 kb on + strandat 774.450 kb on + strandat 774.451 kb on - strandat 774.887 kb on - strandat 774.887 kb on - strandat 775.008 kb on + strand, within Ga0059261_0745at 775.009 kb on - strand, within Ga0059261_0745at 775.063 kb on + strand, within Ga0059261_0745at 775.063 kb on + strandat 775.064 kb on - strand, within Ga0059261_0745at 775.064 kb on - strand, within Ga0059261_0745at 775.078 kb on + strand, within Ga0059261_0745at 775.426 kb on + strandat 775.426 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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771,795 + Ga0059261_0741 0.68 -1.9
771,795 + Ga0059261_0741 0.68 -1.0
771,795 + Ga0059261_0741 0.68 -0.3
771,795 + Ga0059261_0741 0.68 +0.3
771,795 + Ga0059261_0741 0.68 +0.4
771,795 + Ga0059261_0741 0.68 +0.3
771,795 + Ga0059261_0741 0.68 -1.3
771,795 + Ga0059261_0741 0.68 +0.1
771,796 - Ga0059261_0741 0.68 +0.1
771,796 - Ga0059261_0741 0.68 -0.2
771,796 - Ga0059261_0741 0.68 -1.1
771,796 - Ga0059261_0741 0.68 +0.7
771,797 + Ga0059261_0741 0.68 -1.1
771,797 + Ga0059261_0741 0.68 +0.3
771,798 - Ga0059261_0741 0.68 -0.1
771,798 - Ga0059261_0741 0.68 -0.1
771,909 + Ga0059261_0741 0.76 +0.7
771,981 + Ga0059261_0741 0.80 -0.1
771,982 - +1.5
771,982 - Ga0059261_0741 0.80 +0.9
772,021 - Ga0059261_0741 0.83 -0.3
772,084 + Ga0059261_0741 0.87 -0.4
772,085 - Ga0059261_0741 0.87 -0.4
772,085 - Ga0059261_0741 0.87 -0.1
772,249 + -1.5
772,250 - -3.0
772,250 - -0.4
772,250 - +0.3
772,250 - -0.5
772,250 - -0.2
772,325 + -0.8
772,325 + +0.3
772,326 - +0.8
772,326 - +0.1
772,326 - -0.1
772,326 - -0.3
772,404 + Ga0059261_0742 0.32 +0.2
772,404 + Ga0059261_0742 0.32 -0.1
772,404 + +1.2
772,404 + Ga0059261_0742 0.32 +0.3
772,405 - Ga0059261_0742 0.32 -1.4
772,405 - Ga0059261_0742 0.32 +0.1
772,405 - Ga0059261_0742 0.32 +1.0
772,405 - Ga0059261_0742 0.32 -0.2
772,509 + Ga0059261_0742 0.64 -0.0
772,509 + Ga0059261_0742 0.64 +0.1
772,510 - Ga0059261_0742 0.64 +0.6
772,510 - Ga0059261_0742 0.64 -0.8
772,510 - Ga0059261_0742 0.64 -0.0
772,510 - Ga0059261_0742 0.64 +0.3
772,510 - Ga0059261_0742 0.64 -4.7
772,510 - Ga0059261_0742 0.64 +0.0
772,781 + -0.6
772,929 - Ga0059261_0743 0.17 -0.6
772,929 - Ga0059261_0743 0.17 -1.1
773,081 + Ga0059261_0743 0.25 +0.7
773,081 + Ga0059261_0743 0.25 +0.7
773,084 + Ga0059261_0743 0.25 +0.1
773,084 + Ga0059261_0743 0.25 -1.6
773,085 - Ga0059261_0743 0.25 +0.6
773,085 - Ga0059261_0743 0.25 +1.6
773,085 - Ga0059261_0743 0.25 -0.2
773,085 - Ga0059261_0743 0.25 +0.1
773,085 - Ga0059261_0743 0.25 +0.1
773,085 - Ga0059261_0743 0.25 -3.1
773,085 - Ga0059261_0743 0.25 -0.3
773,085 - Ga0059261_0743 0.25 +0.6
773,124 - Ga0059261_0743 0.28 +2.0
773,819 + Ga0059261_0743 0.66 +0.7
773,819 + Ga0059261_0743 0.66 +0.2
773,819 + Ga0059261_0743 0.66 +0.3
773,819 + Ga0059261_0743 0.66 +1.2
773,819 + Ga0059261_0743 0.66 +1.0
773,820 - Ga0059261_0743 0.66 +1.0
773,820 - Ga0059261_0743 0.66 +0.7
773,861 + Ga0059261_0743 0.68 +1.1
773,861 + Ga0059261_0743 0.68 +0.1
773,861 + Ga0059261_0743 0.68 +1.5
773,861 + Ga0059261_0743 0.68 -0.5
773,861 + Ga0059261_0743 0.68 +0.4
773,861 + Ga0059261_0743 0.68 +1.5
773,861 + Ga0059261_0743 0.68 +0.6
773,862 - Ga0059261_0743 0.68 +0.3
773,862 - Ga0059261_0743 0.68 +0.4
773,862 - Ga0059261_0743 0.68 +0.9
773,862 - Ga0059261_0743 0.68 +0.7
774,324 - -0.1
774,398 + -0.4
774,408 + +0.3
774,410 + +1.0
774,410 + +0.8
774,410 + -0.4
774,410 + +0.9
774,410 + +0.9
774,410 + +0.8
774,410 + -0.9
774,410 + -0.2
774,410 + +0.7
774,410 + +0.3
774,410 + +0.3
774,410 + -1.1
774,410 + +0.5
774,410 + +0.5
774,411 - +1.9
774,411 - +0.7
774,411 - +0.5
774,411 - +0.5
774,411 - +0.8
774,411 - +0.5
774,411 - +0.9
774,411 - +0.1
774,411 - +1.1
774,411 - +0.1
774,411 - +0.5
774,411 - +1.2
774,411 - +0.4
774,411 - +1.6
774,411 - +0.1
774,411 - +1.2
774,411 - +0.8
774,450 + +0.1
774,450 + +0.8
774,450 + +0.1
774,450 + +0.9
774,450 + +1.3
774,450 + -0.4
774,450 + +1.1
774,451 - +0.5
774,887 - +0.6
774,887 - -0.3
775,008 + Ga0059261_0745 0.24 -1.0
775,009 - Ga0059261_0745 0.24 +0.8
775,063 + Ga0059261_0745 0.33 -0.9
775,063 + -1.7
775,064 - Ga0059261_0745 0.33 -0.4
775,064 - Ga0059261_0745 0.33 -0.9
775,078 + Ga0059261_0745 0.36 -0.9
775,426 + -0.6
775,426 + -0.3

Or see this region's nucleotide sequence