Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0198 and Ga0059261_0199 are separated by 49 nucleotides Ga0059261_0199 and Ga0059261_0200 are separated by 3 nucleotides
Ga0059261_0198: Ga0059261_0198 - alanyl-tRNA synthetase (EC 6.1.1.7), at 183,591 to 186,251
_0198
Ga0059261_0199: Ga0059261_0199 - hypothetical protein, at 186,301 to 186,852
_0199
Ga0059261_0200: Ga0059261_0200 - Xaa-Pro aminopeptidase, at 186,856 to 187,956
_0200
Position (kb) 186
187 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 186.378 kb on + strand, within Ga0059261_0199 at 186.379 kb on - strand, within Ga0059261_0199 at 186.379 kb on - strand, within Ga0059261_0199 at 186.379 kb on - strand, within Ga0059261_0199 at 186.379 kb on - strand, within Ga0059261_0199 at 186.609 kb on - strand, within Ga0059261_0199 at 186.609 kb on - strand at 186.662 kb on + strand, within Ga0059261_0199 at 186.780 kb on + strand, within Ga0059261_0199 at 186.835 kb on - strand at 186.893 kb on + strand at 186.893 kb on + strand at 186.894 kb on - strand at 186.915 kb on + strand at 186.915 kb on + strand at 186.916 kb on - strand at 186.916 kb on - strand at 186.916 kb on - strand at 186.959 kb on + strand at 186.959 kb on + strand at 186.959 kb on + strand at 186.959 kb on + strand at 186.959 kb on + strand at 186.959 kb on + strand at 186.959 kb on + strand at 186.959 kb on + strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 186.960 kb on - strand at 187.047 kb on + strand, within Ga0059261_0200 at 187.091 kb on + strand, within Ga0059261_0200 at 187.092 kb on - strand, within Ga0059261_0200 at 187.118 kb on + strand, within Ga0059261_0200 at 187.118 kb on + strand, within Ga0059261_0200 at 187.118 kb on + strand, within Ga0059261_0200 at 187.118 kb on + strand, within Ga0059261_0200 at 187.118 kb on + strand, within Ga0059261_0200 at 187.119 kb on - strand, within Ga0059261_0200 at 187.119 kb on - strand, within Ga0059261_0200 at 187.119 kb on - strand, within Ga0059261_0200 at 187.119 kb on - strand, within Ga0059261_0200 at 187.119 kb on - strand, within Ga0059261_0200 at 187.119 kb on - strand, within Ga0059261_0200 at 187.119 kb on - strand, within Ga0059261_0200 at 187.119 kb on - strand, within Ga0059261_0200 at 187.121 kb on + strand, within Ga0059261_0200 at 187.121 kb on + strand, within Ga0059261_0200 at 187.274 kb on + strand, within Ga0059261_0200 at 187.275 kb on - strand, within Ga0059261_0200 at 187.355 kb on + strand, within Ga0059261_0200 at 187.355 kb on + strand, within Ga0059261_0200 at 187.355 kb on + strand, within Ga0059261_0200 at 187.356 kb on - strand, within Ga0059261_0200 at 187.488 kb on - strand, within Ga0059261_0200
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 186,378 + Ga0059261_0199 0.14 +0.5 186,379 - Ga0059261_0199 0.14 +2.3 186,379 - Ga0059261_0199 0.14 +0.6 186,379 - Ga0059261_0199 0.14 -0.4 186,379 - Ga0059261_0199 0.14 +0.2 186,609 - Ga0059261_0199 0.56 -0.4 186,609 - -0.1 186,662 + Ga0059261_0199 0.65 -4.6 186,780 + Ga0059261_0199 0.87 +0.1 186,835 - +0.2 186,893 + +0.5 186,893 + +0.1 186,894 - -0.0 186,915 + -0.5 186,915 + -0.9 186,916 - -0.4 186,916 - -0.0 186,916 - +0.0 186,959 + +1.4 186,959 + -0.1 186,959 + +0.2 186,959 + -1.5 186,959 + -0.0 186,959 + +0.3 186,959 + -0.4 186,959 + +0.1 186,960 - +0.3 186,960 - +0.1 186,960 - +0.1 186,960 - +0.0 186,960 - +0.3 186,960 - -0.2 186,960 - +0.4 186,960 - -0.8 186,960 - -0.7 186,960 - -0.2 186,960 - -0.1 186,960 - +0.3 186,960 - -0.6 187,047 + Ga0059261_0200 0.17 +0.1 187,091 + Ga0059261_0200 0.21 -0.9 187,092 - Ga0059261_0200 0.21 +0.7 187,118 + Ga0059261_0200 0.24 -0.4 187,118 + Ga0059261_0200 0.24 -0.4 187,118 + Ga0059261_0200 0.24 -0.1 187,118 + Ga0059261_0200 0.24 +0.1 187,118 + Ga0059261_0200 0.24 -0.4 187,119 - Ga0059261_0200 0.24 +0.1 187,119 - Ga0059261_0200 0.24 -0.6 187,119 - Ga0059261_0200 0.24 +0.2 187,119 - Ga0059261_0200 0.24 +0.5 187,119 - Ga0059261_0200 0.24 +0.7 187,119 - Ga0059261_0200 0.24 -1.0 187,119 - Ga0059261_0200 0.24 -2.3 187,119 - Ga0059261_0200 0.24 +2.2 187,121 + Ga0059261_0200 0.24 -0.2 187,121 + Ga0059261_0200 0.24 +0.2 187,274 + Ga0059261_0200 0.38 -0.5 187,275 - Ga0059261_0200 0.38 +0.7 187,355 + Ga0059261_0200 0.45 -0.5 187,355 + Ga0059261_0200 0.45 -0.0 187,355 + Ga0059261_0200 0.45 -2.4 187,356 - Ga0059261_0200 0.45 +1.0 187,488 - Ga0059261_0200 0.57 +0.6
Or see this region's nucleotide sequence