Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0033 and Ga0059261_0034 are separated by 73 nucleotides Ga0059261_0034 and Ga0059261_0035 overlap by 58 nucleotides Ga0059261_0035 and Ga0059261_0036 are separated by 129 nucleotides
Ga0059261_0033: Ga0059261_0033 - transcriptional regulator, AsnC family, at 27,522 to 27,974
_0033
Ga0059261_0034: Ga0059261_0034 - Putative threonine efflux protein, at 28,048 to 28,698
_0034
Ga0059261_0035: Ga0059261_0035 - Uncharacterized protein conserved in bacteria, at 28,641 to 28,985
_0035
Ga0059261_0036: Ga0059261_0036 - DNA gyrase, A subunit, at 29,115 to 31,856
_0036
Position (kb) 28
29 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 27.655 kb on + strand, within Ga0059261_0033 at 27.655 kb on + strand, within Ga0059261_0033 at 27.655 kb on + strand at 27.655 kb on + strand, within Ga0059261_0033 at 27.767 kb on + strand, within Ga0059261_0033 at 27.767 kb on + strand at 27.767 kb on + strand, within Ga0059261_0033 at 27.768 kb on - strand, within Ga0059261_0033 at 27.769 kb on + strand, within Ga0059261_0033 at 27.769 kb on + strand, within Ga0059261_0033 at 27.769 kb on + strand, within Ga0059261_0033 at 27.769 kb on + strand, within Ga0059261_0033 at 27.770 kb on - strand, within Ga0059261_0033 at 27.770 kb on - strand, within Ga0059261_0033 at 27.770 kb on - strand, within Ga0059261_0033 at 27.770 kb on - strand, within Ga0059261_0033 at 27.770 kb on - strand, within Ga0059261_0033 at 27.770 kb on - strand, within Ga0059261_0033 at 27.770 kb on - strand, within Ga0059261_0033 at 27.770 kb on - strand, within Ga0059261_0033 at 27.943 kb on - strand at 27.943 kb on - strand at 27.948 kb on - strand at 28.205 kb on + strand, within Ga0059261_0034 at 28.206 kb on - strand, within Ga0059261_0034 at 28.206 kb on - strand, within Ga0059261_0034 at 28.206 kb on - strand, within Ga0059261_0034 at 28.206 kb on - strand, within Ga0059261_0034 at 28.294 kb on + strand, within Ga0059261_0034 at 28.294 kb on + strand, within Ga0059261_0034 at 28.295 kb on - strand, within Ga0059261_0034 at 28.303 kb on + strand, within Ga0059261_0034 at 28.303 kb on + strand, within Ga0059261_0034 at 28.304 kb on - strand, within Ga0059261_0034 at 28.444 kb on + strand, within Ga0059261_0034 at 28.444 kb on + strand, within Ga0059261_0034 at 28.444 kb on + strand, within Ga0059261_0034 at 28.444 kb on + strand, within Ga0059261_0034 at 28.445 kb on - strand, within Ga0059261_0034 at 28.445 kb on - strand, within Ga0059261_0034 at 28.445 kb on - strand, within Ga0059261_0034 at 28.445 kb on - strand, within Ga0059261_0034 at 28.445 kb on - strand, within Ga0059261_0034 at 28.627 kb on + strand, within Ga0059261_0034 at 28.696 kb on + strand at 28.697 kb on - strand at 28.697 kb on - strand at 28.773 kb on + strand at 28.774 kb on - strand, within Ga0059261_0035 at 28.885 kb on + strand at 28.885 kb on + strand, within Ga0059261_0035 at 28.886 kb on - strand, within Ga0059261_0035 at 28.886 kb on - strand, within Ga0059261_0035 at 28.886 kb on - strand, within Ga0059261_0035 at 28.966 kb on + strand at 28.966 kb on + strand at 28.966 kb on + strand at 28.966 kb on + strand at 28.976 kb on + strand at 28.976 kb on + strand at 28.977 kb on - strand at 28.977 kb on - strand at 29.116 kb on + strand at 29.116 kb on + strand at 29.116 kb on + strand at 29.117 kb on - strand at 29.117 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 27,655 + Ga0059261_0033 0.29 -0.0 27,655 + Ga0059261_0033 0.29 -0.2 27,655 + +0.9 27,655 + Ga0059261_0033 0.29 +1.3 27,767 + Ga0059261_0033 0.54 -0.0 27,767 + +0.1 27,767 + Ga0059261_0033 0.54 +0.1 27,768 - Ga0059261_0033 0.54 -0.0 27,769 + Ga0059261_0033 0.55 +1.1 27,769 + Ga0059261_0033 0.55 +0.0 27,769 + Ga0059261_0033 0.55 +0.5 27,769 + Ga0059261_0033 0.55 -0.6 27,770 - Ga0059261_0033 0.55 +0.3 27,770 - Ga0059261_0033 0.55 +0.3 27,770 - Ga0059261_0033 0.55 +0.0 27,770 - Ga0059261_0033 0.55 -0.1 27,770 - Ga0059261_0033 0.55 +0.3 27,770 - Ga0059261_0033 0.55 +0.9 27,770 - Ga0059261_0033 0.55 +0.4 27,770 - Ga0059261_0033 0.55 +0.3 27,943 - +0.4 27,943 - +1.1 27,948 - -0.1 28,205 + Ga0059261_0034 0.24 -0.4 28,206 - Ga0059261_0034 0.24 -0.3 28,206 - Ga0059261_0034 0.24 -0.5 28,206 - Ga0059261_0034 0.24 +1.3 28,206 - Ga0059261_0034 0.24 +0.1 28,294 + Ga0059261_0034 0.38 +0.4 28,294 + Ga0059261_0034 0.38 -3.1 28,295 - Ga0059261_0034 0.38 +0.2 28,303 + Ga0059261_0034 0.39 -0.1 28,303 + Ga0059261_0034 0.39 -0.7 28,304 - Ga0059261_0034 0.39 +0.4 28,444 + Ga0059261_0034 0.61 -0.1 28,444 + Ga0059261_0034 0.61 -0.1 28,444 + Ga0059261_0034 0.61 -0.6 28,444 + Ga0059261_0034 0.61 +0.2 28,445 - Ga0059261_0034 0.61 +1.4 28,445 - Ga0059261_0034 0.61 -0.5 28,445 - Ga0059261_0034 0.61 -0.2 28,445 - Ga0059261_0034 0.61 -0.3 28,445 - Ga0059261_0034 0.61 +0.2 28,627 + Ga0059261_0034 0.89 +0.1 28,696 + +0.4 28,697 - -0.1 28,697 - -0.1 28,773 + +0.9 28,774 - Ga0059261_0035 0.39 +0.8 28,885 + +1.2 28,885 + Ga0059261_0035 0.71 +1.1 28,886 - Ga0059261_0035 0.71 +0.3 28,886 - Ga0059261_0035 0.71 +0.5 28,886 - Ga0059261_0035 0.71 -0.7 28,966 + -0.3 28,966 + +0.7 28,966 + -0.5 28,966 + +1.6 28,976 + -0.1 28,976 + +1.0 28,977 - -0.1 28,977 - -0.7 29,116 + -0.2 29,116 + -1.1 29,116 + +0.9 29,117 - +0.1 29,117 - +0.4
Or see this region's nucleotide sequence