Strain Fitness in Caulobacter crescentus NA1000 around CCNA_R0035

Experiment: PYE with Nalidixic 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.03 mg/ml
1,548,374	+				+0.4
1,548,382	-				+0.2
1,548,382	-				+0.9
1,548,387	-				+0.8
1,548,387	-				-1.2
1,548,399	-				+1.4
1,548,412	+				+1.6
1,548,412	+				+1.2
1,548,471	+				+1.0
1,548,479	-				-1.5
1,548,518	-				+0.2
1,548,570	+				+1.9
1,548,575	+				+2.2
1,548,575	+				+1.9
1,548,575	+				+3.0
1,548,575	+				+1.0
1,548,575	+				+1.4
1,548,575	+				+1.6
1,548,583	-				-0.1
1,548,583	-				-0.1
1,548,585	+				+2.1
1,548,595	+		CCNA_01433	0.11	+1.8
1,548,608	+		CCNA_01433	0.15	+1.7
1,548,629	+		CCNA_01433	0.22	+2.8
1,548,639	+		CCNA_01433	0.25	+3.8
1,548,660	+		CCNA_01433	0.32	+2.9
1,548,660	+		CCNA_01433	0.32	+2.0
1,548,660	+		CCNA_01433	0.32	+1.9
1,548,668	-		CCNA_01433	0.35	+0.2
1,548,668	-		CCNA_01433	0.35	-0.3
1,548,668	-		CCNA_01433	0.35	-0.5
1,548,689	-		CCNA_01433	0.42	-1.9
1,548,699	+		CCNA_01433	0.45	+1.6
1,548,699	-		CCNA_01433	0.45	+2.1
1,548,888	+				+2.3
1,549,037	+		CCNA_01434	0.37	-0.5
1,549,037	+		CCNA_01434	0.37	+1.2
1,549,058	+		CCNA_01434	0.42	+1.1
1,549,061	-		CCNA_01434	0.43	-0.9
1,549,068	+		CCNA_01434	0.45	+1.7
1,549,068	+		CCNA_01434	0.45	+0.5
1,549,068	+		CCNA_01434	0.45	+1.8
1,549,076	-		CCNA_01434	0.46	-1.6
1,549,076	-		CCNA_01434	0.46	+0.4
1,549,076	-		CCNA_01434	0.46	+0.7
1,549,089	-		CCNA_01434	0.50	-0.9
1,549,175	+		CCNA_01434	0.70	+1.2
1,549,183	-		CCNA_01434	0.72	+0.8
1,549,254	+		CCNA_01434	0.88	+1.0
1,549,262	-				+1.2
1,549,286	+				+1.1
1,549,299	+				+1.0
1,549,309	+				+2.3
1,549,458	+				+1.9
1,549,521	+				+1.8
1,549,527	-				+0.9
1,549,543	-		CCNA_01435	0.13	-0.0
1,549,577	+		CCNA_01435	0.27	+1.6
1,549,587	-		CCNA_01435	0.31	+0.9
1,549,592	-		CCNA_01435	0.33	+1.3
1,549,611	-		CCNA_01435	0.40	+0.5
1,549,626	+		CCNA_01435	0.46	-2.3
1,549,626	+		CCNA_01435	0.46	+0.6
1,549,626	+		CCNA_01435	0.46	-0.3
1,549,634	-		CCNA_01435	0.50	+0.3
1,549,634	-		CCNA_01435	0.50	+0.0
1,549,643	+		CCNA_01435	0.53	-0.2
1,549,661	-		CCNA_01435	0.60	+0.7
1,549,661	-		CCNA_01435	0.60	+1.7
1,549,668	-		CCNA_01435	0.63	+0.6
1,549,669	+		CCNA_01435	0.63	-1.1
1,549,683	-		CCNA_01435	0.69	+0.9
1,549,693	-		CCNA_01435	0.73	+1.1
1,549,693	-		CCNA_01435	0.73	+0.6
1,549,693	-		CCNA_01435	0.73	+0.1
1,549,721	-		CCNA_01435	0.84	+1.1
1,549,736	-				+0.4
1,549,766	+				+0.2
1,549,771	+				+2.2
1,549,777	+				-0.5
1,549,806	-		CCNA_01437	0.19	-0.0
1,549,841	+		CCNA_01437	0.33	-1.8
1,549,868	+		CCNA_01437	0.44	+0.6
1,549,868	+		CCNA_01437	0.44	-2.1
1,549,883	-		CCNA_01437	0.50	-0.4
1,549,899	-		CCNA_01437	0.56	+1.4
1,549,909	-		CCNA_01437	0.60	+1.1
1,549,921	+		CCNA_01437	0.65	-1.1
1,549,923	+		CCNA_01437	0.66	+0.9
1,549,993	+				-0.5
1,550,050	+				-0.5
1,550,069	-				-0.1
1,550,069	-				-2.2
1,550,325	+		CCNA_01438	0.16	-0.9
1,550,325	+		CCNA_01438	0.16	+0.5
1,550,325	+		CCNA_01438	0.16	+0.4
1,550,325	+		CCNA_01438	0.16	-0.4
1,550,325	+		CCNA_01438	0.16	-1.3
1,550,325	+		CCNA_01438	0.16	-1.7
1,550,333	-		CCNA_01438	0.17	+0.6
1,550,333	-		CCNA_01438	0.17	-0.1
1,550,349	+		CCNA_01438	0.18	-2.3
1,550,349	+		CCNA_01438	0.18	-2.0
1,550,357	-		CCNA_01438	0.19	-0.4
1,550,380	-		CCNA_01438	0.21	+1.1