Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03019

Experiment: PYE with Nalidixic 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.03 mg/ml
3,171,447	+				+2.0
3,171,455	-				-0.9
3,171,457	+				-0.1
3,171,457	+				-0.6
3,171,465	-				+1.8
3,171,465	-				-0.3
3,171,483	-				+1.4
3,171,539	+				+0.5
3,171,565	+				+0.1
3,171,565	+				+0.4
3,171,565	+				+0.2
3,171,577	+				-0.8
3,171,578	-				+0.7
3,171,578	-				+0.6
3,171,585	-				+0.7
3,171,585	-				+2.0
3,171,600	+				-1.6
3,171,608	-				+0.3
3,171,651	+				-0.5
3,171,659	-				+1.7
3,171,681	+				-0.6
3,171,684	-				+0.0
3,171,689	-				+0.5
3,171,689	-				-0.5
3,171,707	+				-1.3
3,171,707	+				-2.2
3,171,715	-				+1.6
3,171,722	+				-0.7
3,171,774	+				-1.6
3,171,777	-				+0.1
3,171,781	+				+1.4
3,171,782	-				+1.1
3,171,789	-				+2.3
3,171,838	+				+0.1
3,171,851	-				+1.0
3,171,864	-				-2.5
3,171,864	-				-1.0
3,171,871	+		CCNA_03019	0.10	+1.0
3,171,901	-		CCNA_03019	0.11	-0.4
3,171,956	+		CCNA_03019	0.13	-1.5
3,171,956	+		CCNA_03019	0.13	-0.5
3,171,956	+		CCNA_03019	0.13	+0.1
3,171,956	+		CCNA_03019	0.13	+1.0
3,171,964	-		CCNA_03019	0.13	-1.2
3,171,964	-		CCNA_03019	0.13	-2.4
3,172,028	+		CCNA_03019	0.16	-0.5
3,172,028	+		CCNA_03019	0.16	+1.3
3,172,036	-		CCNA_03019	0.16	+1.9
3,172,043	+		CCNA_03019	0.16	-0.8
3,172,043	+		CCNA_03019	0.16	+0.1
3,172,111	-		CCNA_03019	0.19	-1.0
3,172,113	-		CCNA_03019	0.19	-2.4
3,172,117	-		CCNA_03019	0.19	-0.2
3,172,127	+		CCNA_03019	0.19	+0.5
3,172,141	-		CCNA_03019	0.20	-0.6
3,172,199	+		CCNA_03019	0.22	-0.4
3,172,247	+		CCNA_03019	0.23	-0.4
3,172,264	+		CCNA_03019	0.24	-0.6
3,172,264	+		CCNA_03019	0.24	-1.2
3,172,264	+		CCNA_03019	0.24	-1.1
3,172,271	-		CCNA_03019	0.24	-0.7
3,172,272	-		CCNA_03019	0.24	-0.0
3,172,321	-		CCNA_03019	0.26	-1.4
3,172,332	+		CCNA_03019	0.26	-1.4
3,172,352	+		CCNA_03019	0.27	-0.5
3,172,360	-		CCNA_03019	0.27	-0.3
3,172,362	+		CCNA_03019	0.27	-0.5
3,172,368	+		CCNA_03019	0.28	-0.2
3,172,429	+		CCNA_03019	0.30	-0.0
3,172,470	+		CCNA_03019	0.31	-1.4
3,172,496	+		CCNA_03019	0.32	-0.6
3,172,506	+		CCNA_03019	0.32	-1.3
3,172,545	-		CCNA_03019	0.34	+1.3
3,172,550	+		CCNA_03019	0.34	+1.5
3,172,550	+		CCNA_03019	0.34	+1.7
3,172,550	+		CCNA_03019	0.34	+0.1
3,172,558	+		CCNA_03019	0.34	-0.1
3,172,566	-		CCNA_03019	0.35	-0.9
3,172,568	+		CCNA_03019	0.35	+0.5
3,172,597	+		CCNA_03019	0.36	-0.9
3,172,605	-		CCNA_03019	0.36	-0.1
3,172,616	-		CCNA_03019	0.36	-1.3
3,172,618	+		CCNA_03019	0.36	-2.5
3,172,619	+		CCNA_03019	0.36	+1.6
3,172,619	+		CCNA_03019	0.36	-2.2
3,172,665	+		CCNA_03019	0.38	+1.1
3,172,677	+		CCNA_03019	0.38	-0.9
3,172,680	-		CCNA_03019	0.39	-0.0
3,172,680	-		CCNA_03019	0.39	+0.6
3,172,693	+		CCNA_03019	0.39	-0.2
3,172,693	+				+0.7
3,172,693	+		CCNA_03019	0.39	-0.2
3,172,725	-		CCNA_03019	0.40	+0.6
3,172,747	-		CCNA_03019	0.41	+2.4
3,172,752	-		CCNA_03019	0.41	+2.3
3,172,763	+		CCNA_03019	0.42	+0.1
3,172,764	+		CCNA_03019	0.42	+0.1
3,172,764	+		CCNA_03019	0.42	-1.4
3,172,797	-		CCNA_03019	0.43	-2.2
3,172,845	-		CCNA_03019	0.44	-1.6
3,172,850	-		CCNA_03019	0.45	-2.4
3,172,855	-		CCNA_03019	0.45	+0.1
3,172,858	+		CCNA_03019	0.45	-1.6
3,172,858	+		CCNA_03019	0.45	-1.7
3,172,858	+		CCNA_03019	0.45	+0.1
3,172,861	-		CCNA_03019	0.45	-1.6
3,172,866	+		CCNA_03019	0.45	-1.1
3,172,876	+		CCNA_03019	0.45	-1.2
3,172,884	-		CCNA_03019	0.46	-0.5
3,172,898	+		CCNA_03019	0.46	+2.3
3,172,925	+		CCNA_03019	0.47	-0.4
3,172,965	+		CCNA_03019	0.49	-0.0
3,173,032	+		CCNA_03019	0.51	-0.3
3,173,032	+		CCNA_03019	0.51	+0.1
3,173,032	+		CCNA_03019	0.51	-0.3
3,173,032	+		CCNA_03019	0.51	-0.9
3,173,032	+		CCNA_03019	0.51	-0.9
3,173,032	+		CCNA_03019	0.51	-0.0
3,173,032	+		CCNA_03019	0.51	-0.2
3,173,032	+		CCNA_03019	0.51	-0.2
3,173,032	+		CCNA_03019	0.51	-1.7
3,173,040	-		CCNA_03019	0.51	-0.4
3,173,040	-		CCNA_03019	0.51	-0.5
3,173,040	-		CCNA_03019	0.51	-0.4
3,173,045	-		CCNA_03019	0.51	-0.6
3,173,063	+		CCNA_03019	0.52	+0.7
3,173,066	-		CCNA_03019	0.52	-1.2
3,173,073	+		CCNA_03019	0.52	-0.2
3,173,140	-		CCNA_03019	0.55	-1.4
3,173,146	+		CCNA_03019	0.55	-0.0
3,173,151	+		CCNA_03019	0.55	-1.0
3,173,159	-		CCNA_03019	0.55	-1.6
3,173,180	-		CCNA_03019	0.56	+1.4
3,173,180	-		CCNA_03019	0.56	+0.7
3,173,218	+		CCNA_03019	0.57	-1.1
3,173,237	+		CCNA_03019	0.58	-1.6
3,173,250	-		CCNA_03019	0.59	+0.7
3,173,260	+		CCNA_03019	0.59	-0.0
3,173,268	-		CCNA_03019	0.59	+0.1
3,173,268	-		CCNA_03019	0.59	-2.2
3,173,353	+		CCNA_03019	0.62	-0.1
3,173,387	+		CCNA_03019	0.63	-1.2
3,173,409	+		CCNA_03019	0.64	-0.3
3,173,409	+		CCNA_03019	0.64	-1.0
3,173,417	-		CCNA_03019	0.64	-0.3
3,173,439	+		CCNA_03019	0.65	-1.7
3,173,444	+		CCNA_03019	0.65	+1.1
3,173,453	-		CCNA_03019	0.66	-0.0
3,173,492	-		CCNA_03019	0.67	-0.4
3,173,529	-		CCNA_03019	0.68	-1.6
3,173,569	+		CCNA_03019	0.70	+0.5
3,173,578	+		CCNA_03019	0.70	-2.2
3,173,586	-		CCNA_03019	0.70	+1.3
3,173,602	+		CCNA_03019	0.71	+0.0
3,173,617	+		CCNA_03019	0.71	-0.1
3,173,644	+		CCNA_03019	0.72	+0.8
3,173,652	-		CCNA_03019	0.73	-3.1
3,173,658	+		CCNA_03019	0.73	+0.5
3,173,686	-		CCNA_03019	0.74	-0.6
3,173,687	+		CCNA_03019	0.74	-0.2
3,173,713	+		CCNA_03019	0.75	-1.3
3,173,728	+		CCNA_03019	0.75	-0.3
3,173,728	+		CCNA_03019	0.75	-0.5
3,173,753	-		CCNA_03019	0.76	+1.0
3,173,753	-		CCNA_03019	0.76	-0.8
3,173,761	-		CCNA_03019	0.76	+0.7
3,173,761	-		CCNA_03019	0.76	-0.4
3,173,769	-		CCNA_03019	0.77	+0.7
3,173,791	+		CCNA_03019	0.78	+0.3
3,173,796	+		CCNA_03019	0.78	-1.3
3,173,799	-		CCNA_03019	0.78	-2.8
3,173,806	+		CCNA_03019	0.78	-0.0
3,173,843	+		CCNA_03019	0.79	-0.9
3,173,858	+		CCNA_03019	0.80	-0.4
3,173,917	+		CCNA_03019	0.82	-0.3
3,173,930	+		CCNA_03019	0.82	-0.8
3,173,930	+		CCNA_03019	0.82	+0.6
3,173,938	+		CCNA_03019	0.83	-1.9
3,173,945	+		CCNA_03019	0.83	-0.6
3,173,963	-		CCNA_03019	0.84	-0.8
3,173,966	+		CCNA_03019	0.84	-0.3
3,173,966	+		CCNA_03019	0.84	-2.9
3,173,974	-		CCNA_03019	0.84	-0.8
3,174,049	+		CCNA_03019	0.87	-0.2
3,174,049	+		CCNA_03019	0.87	+0.6
3,174,054	+		CCNA_03019	0.87	+0.6
3,174,062	-		CCNA_03019	0.87	-0.7
3,174,081	-		CCNA_03019	0.88	-1.4
3,174,114	+		CCNA_03019	0.89	+0.3
3,174,114	+		CCNA_03019	0.89	-0.5
3,174,207	+				-1.4
3,174,207	+				+1.0
3,174,225	+				-0.2
3,174,228	-				-0.6
3,174,258	-				+0.6
3,174,279	-				+0.1
3,174,279	-				+0.1
3,174,317	+				-0.3
3,174,327	+				+1.0
3,174,335	-				+0.1
3,174,335	-				-0.5
3,174,374	+				-0.2
3,174,376	+				+0.7
3,174,376	+				+0.7
3,174,376	+				-1.6
3,174,376	+				-1.8
3,174,384	-				-0.7
3,174,384	-				-2.8
3,174,384	-				-1.2
3,174,403	-				-2.2
3,174,483	+				+1.0
3,174,483	+				-0.7
3,174,505	+				-1.3
3,174,513	-				+0.5
3,174,554	+				+1.7
3,174,579	-				+1.0
3,174,619	-				+2.0
3,174,644	+		CCNA_03020	0.12	-0.6
3,174,680	-		CCNA_03020	0.15	-1.2
3,174,755	-		CCNA_03020	0.22	-1.8
3,174,818	-		CCNA_03020	0.27	-1.4
3,174,824	-		CCNA_03020	0.28	-0.3
3,174,828	+		CCNA_03020	0.28	+0.5
3,174,831	+		CCNA_03020	0.29	-1.1
3,174,831	+		CCNA_03020	0.29	+1.6
3,174,831	+		CCNA_03020	0.29	-0.7
3,174,839	+		CCNA_03020	0.29	+0.2
3,174,839	-		CCNA_03020	0.29	+0.4
3,174,839	-		CCNA_03020	0.29	+0.1
3,174,839	-		CCNA_03020	0.29	-0.9
3,174,839	-		CCNA_03020	0.29	-0.2
3,174,868	+		CCNA_03020	0.32	-0.9
3,174,891	-		CCNA_03020	0.34	+0.4
3,174,892	+		CCNA_03020	0.34	-1.0
3,174,893	-		CCNA_03020	0.34	-0.9
3,174,897	+		CCNA_03020	0.34	-0.0
3,174,943	-		CCNA_03020	0.39	+0.3
3,174,951	+		CCNA_03020	0.39	-1.9
3,174,954	-		CCNA_03020	0.40	-0.0
3,174,956	-		CCNA_03020	0.40	+0.1
3,174,958	+		CCNA_03020	0.40	-1.1
3,174,969	+		CCNA_03020	0.41	+0.3
3,175,004	-		CCNA_03020	0.44	+0.3
3,175,046	+		CCNA_03020	0.48	-0.8
3,175,054	+		CCNA_03020	0.48	-1.1
3,175,054	+		CCNA_03020	0.48	-0.5
3,175,062	-		CCNA_03020	0.49	+0.1
3,175,062	-		CCNA_03020	0.49	+0.4
3,175,077	+		CCNA_03020	0.50	+0.1
3,175,080	-		CCNA_03020	0.51	+1.8
3,175,098	+		CCNA_03020	0.52	-0.0
3,175,110	+		CCNA_03020	0.53	-0.8
3,175,116	-		CCNA_03020	0.54	-1.0
3,175,116	-		CCNA_03020	0.54	+0.1
3,175,116	-		CCNA_03020	0.54	+0.2
3,175,133	+		CCNA_03020	0.55	+0.4
3,175,136	-		CCNA_03020	0.56	-1.3
3,175,141	-		CCNA_03020	0.56	-1.0
3,175,143	+		CCNA_03020	0.56	+0.9
3,175,144	+		CCNA_03020	0.56	-0.2
3,175,144	+		CCNA_03020	0.56	-0.6
3,175,152	-		CCNA_03020	0.57	-0.0
3,175,152	-		CCNA_03020	0.57	+0.6
3,175,152	-		CCNA_03020	0.57	-1.1
3,175,155	+		CCNA_03020	0.57	-2.1
3,175,155	+		CCNA_03020	0.57	-1.0
3,175,155	+		CCNA_03020	0.57	+1.6
3,175,155	+		CCNA_03020	0.57	-0.2
3,175,155	+		CCNA_03020	0.57	+0.2
3,175,155	+		CCNA_03020	0.57	-1.7
3,175,155	+		CCNA_03020	0.57	+0.5
3,175,155	+		CCNA_03020	0.57	+0.5
3,175,155	+		CCNA_03020	0.57	+0.5
3,175,155	+		CCNA_03020	0.57	+0.8
3,175,163	-		CCNA_03020	0.58	-0.6
3,175,163	-		CCNA_03020	0.58	-0.6
3,175,163	-		CCNA_03020	0.58	+0.2
3,175,163	-		CCNA_03020	0.58	+0.1
3,175,163	-		CCNA_03020	0.58	+1.0
3,175,163	-		CCNA_03020	0.58	-0.5
3,175,163	-		CCNA_03020	0.58	+2.3
3,175,163	-		CCNA_03020	0.58	+0.6
3,175,163	-		CCNA_03020	0.58	-0.0
3,175,163	-		CCNA_03020	0.58	+0.9
3,175,177	+		CCNA_03020	0.59	+1.4
3,175,177	+		CCNA_03020	0.59	-1.2
3,175,185	-		CCNA_03020	0.60	-0.4
3,175,216	+		CCNA_03020	0.63	-0.6
3,175,221	+		CCNA_03020	0.63	-1.7
3,175,298	-		CCNA_03020	0.70	+1.0
3,175,300	+		CCNA_03020	0.70	-0.8
3,175,313	-		CCNA_03020	0.71	+0.1
3,175,340	+		CCNA_03020	0.74	-1.3
3,175,346	+		CCNA_03020	0.74	-0.7
3,175,348	-		CCNA_03020	0.74	+0.4
3,175,371	-		CCNA_03020	0.77	+0.5