Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02483

Experiment: PYE with Nalidixic 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.03 mg/ml
2,629,224	+				+2.4
2,629,238	-				-0.8
2,629,238	-				-2.8
2,629,249	-				-2.2
2,629,257	+				-0.2
2,629,265	+				-1.6
2,629,311	+				+2.3
2,629,319	-				+0.4
2,629,319	-				-0.8
2,629,332	-		CCNA_02482	0.10	-0.6
2,629,337	-		CCNA_02482	0.11	+0.4
2,629,353	-		CCNA_02482	0.13	-0.3
2,629,359	+		CCNA_02482	0.13	-0.2
2,629,374	-		CCNA_02482	0.15	-1.7
2,629,408	-		CCNA_02482	0.19	-0.6
2,629,438	+		CCNA_02482	0.22	-0.6
2,629,446	-		CCNA_02482	0.23	-0.0
2,629,487	+		CCNA_02482	0.27	-1.9
2,629,494	+		CCNA_02482	0.28	+0.7
2,629,494	+		CCNA_02482	0.28	-0.6
2,629,502	-		CCNA_02482	0.29	-1.0
2,629,539	+		CCNA_02482	0.32	-0.2
2,629,585	+		CCNA_02482	0.37	-0.6
2,629,594	+		CCNA_02482	0.38	-2.2
2,629,594	-		CCNA_02482	0.38	-1.3
2,629,609	+		CCNA_02482	0.40	-0.3
2,629,618	+		CCNA_02482	0.41	-0.1
2,629,618	+		CCNA_02482	0.41	-0.8
2,629,618	+		CCNA_02482	0.41	-0.4
2,629,618	+		CCNA_02482	0.41	-0.2
2,629,618	+		CCNA_02482	0.41	+0.2
2,629,625	+		CCNA_02482	0.42	+0.3
2,629,626	-		CCNA_02482	0.42	-0.2
2,629,630	+		CCNA_02482	0.42	-0.3
2,629,638	-		CCNA_02482	0.43	+1.9
2,629,638	-		CCNA_02482	0.43	-0.3
2,629,690	+		CCNA_02482	0.49	-1.4
2,629,691	-		CCNA_02482	0.49	-0.5
2,629,787	+		CCNA_02482	0.59	+2.2
2,629,800	+		CCNA_02482	0.60	+0.7
2,629,800	+		CCNA_02482	0.60	+0.5
2,629,813	-		CCNA_02482	0.62	+1.0
2,629,835	+		CCNA_02482	0.64	-1.0
2,629,835	+		CCNA_02482	0.64	+0.2
2,629,835	+		CCNA_02482	0.64	-1.5
2,629,835	+		CCNA_02482	0.64	+0.4
2,629,835	+		CCNA_02482	0.64	-1.7
2,629,843	-		CCNA_02482	0.65	+0.0
2,629,843	-		CCNA_02482	0.65	-1.0
2,629,843	-		CCNA_02482	0.65	-0.6
2,629,860	+		CCNA_02482	0.67	-1.3
2,629,861	+		CCNA_02482	0.67	+0.8
2,629,868	-		CCNA_02482	0.68	-0.5
2,629,874	-		CCNA_02482	0.68	+1.7
2,629,876	+		CCNA_02482	0.68	+2.0
2,629,884	-		CCNA_02482	0.69	-1.0
2,629,887	+		CCNA_02482	0.70	-2.6
2,629,895	-		CCNA_02482	0.70	-0.9
2,629,899	+		CCNA_02482	0.71	-0.2
2,629,938	+		CCNA_02482	0.75	+1.0
2,629,946	-		CCNA_02482	0.76	-0.7
2,630,008	+		CCNA_02482	0.82	-1.0
2,630,008	+		CCNA_02482	0.82	+0.9
2,630,013	+		CCNA_02482	0.83	-0.9
2,630,013	+		CCNA_02482	0.83	-1.6
2,630,016	-		CCNA_02482	0.83	-0.5
2,630,016	-		CCNA_02482	0.83	-0.2
2,630,016	-		CCNA_02482	0.83	+0.3
2,630,016	-		CCNA_02482	0.83	+0.5
2,630,016	-		CCNA_02482	0.83	-2.1
2,630,037	+		CCNA_02482	0.86	+0.2
2,630,037	+		CCNA_02482	0.86	-1.1
2,630,037	+		CCNA_02482	0.86	-1.5
2,630,037	+		CCNA_02482	0.86	-2.9
2,630,037	+		CCNA_02482	0.86	-1.0
2,630,037	+		CCNA_02482	0.86	-1.0
2,630,045	-		CCNA_02482	0.86	+0.4
2,630,045	-		CCNA_02482	0.86	-1.1
2,630,045	-		CCNA_02482	0.86	+0.5
2,630,045	-		CCNA_02482	0.86	-0.2
2,630,045	-		CCNA_02482	0.86	-1.8
2,630,047	+		CCNA_02482	0.87	+0.0
2,630,142	-				+0.2
2,630,148	-				-0.8
2,630,161	+				-1.2
2,630,181	+				-1.8
2,630,202	+				+1.4
2,630,204	+				-1.3
2,630,204	+				-0.5
2,630,287	-				-0.3
2,630,311	+				+0.2
2,630,312	+				+0.2
2,630,312	+				-0.3
2,630,319	+				-1.0
2,630,320	-				+1.6
2,630,327	-				-1.3
2,630,327	-				-1.8
2,630,327	-				-2.6
2,630,329	+				+0.8
2,630,329	+				+0.2
2,630,337	-				-0.9
2,630,337	-				-1.7
2,630,355	+				-0.5
2,630,359	+				-0.5
2,630,377	+		CCNA_02483	0.10	+1.6
2,630,403	+		CCNA_02483	0.12	-1.3
2,630,419	-		CCNA_02483	0.13	+0.5
2,630,508	+		CCNA_02483	0.19	-1.0
2,630,516	-		CCNA_02483	0.20	+0.4
2,630,560	+		CCNA_02483	0.23	-1.0
2,630,564	+		CCNA_02483	0.23	+0.4
2,630,585	-		CCNA_02483	0.24	-2.0
2,630,770	-		CCNA_02483	0.37	-1.2
2,630,770	-		CCNA_02483	0.37	-0.7
2,630,792	+		CCNA_02483	0.38	-1.3
2,630,797	+		CCNA_02483	0.39	-1.5
2,630,834	-		CCNA_02483	0.41	+1.0
2,630,842	+		CCNA_02483	0.42	-1.9
2,630,842	+		CCNA_02483	0.42	+0.6
2,630,860	+		CCNA_02483	0.43	-1.3
2,630,882	+		CCNA_02483	0.44	+1.0
2,630,937	+		CCNA_02483	0.48	+0.0
2,630,968	+		CCNA_02483	0.50	-1.2
2,630,977	+		CCNA_02483	0.51	-1.8
2,630,985	-		CCNA_02483	0.51	-0.3
2,630,995	-		CCNA_02483	0.52	-1.9
2,631,000	+		CCNA_02483	0.52	-0.6
2,631,040	+		CCNA_02483	0.55	-0.2
2,631,057	+		CCNA_02483	0.56	+1.0
2,631,065	-		CCNA_02483	0.57	+0.5
2,631,066	-		CCNA_02483	0.57	-0.6
2,631,084	+		CCNA_02483	0.58	-0.3
2,631,095	+		CCNA_02483	0.59	+0.7
2,631,095	+		CCNA_02483	0.59	+0.0
2,631,095	+		CCNA_02483	0.59	-0.8
2,631,103	-		CCNA_02483	0.59	-0.3
2,631,114	+		CCNA_02483	0.60	-0.6
2,631,122	-		CCNA_02483	0.60	+0.0
2,631,185	-		CCNA_02483	0.65	-0.8
2,631,198	-		CCNA_02483	0.65	+0.2
2,631,240	+		CCNA_02483	0.68	-1.5
2,631,240	+		CCNA_02483	0.68	-0.9
2,631,240	+		CCNA_02483	0.68	+0.0
2,631,240	+		CCNA_02483	0.68	-0.6
2,631,248	-		CCNA_02483	0.69	-0.2
2,631,248	-		CCNA_02483	0.69	-1.0
2,631,248	-		CCNA_02483	0.69	-1.7
2,631,248	-		CCNA_02483	0.69	+1.2
2,631,275	-		CCNA_02483	0.71	+0.2
2,631,275	-		CCNA_02483	0.71	-0.1
2,631,283	-		CCNA_02483	0.71	-1.2
2,631,293	-		CCNA_02483	0.72	-0.1
2,631,363	-		CCNA_02483	0.77	+0.2
2,631,365	+		CCNA_02483	0.77	-0.5
2,631,388	-		CCNA_02483	0.78	-1.4
2,631,391	-		CCNA_02483	0.78	+1.4
2,631,480	+		CCNA_02483	0.84	-1.2
2,631,492	+		CCNA_02483	0.85	-0.6
2,631,522	+		CCNA_02483	0.87	-0.3
2,631,559	+		CCNA_02483	0.90	-2.4
2,631,567	-				-1.7
2,631,573	-				+0.8
2,631,573	-				-0.6
2,631,583	+				+0.0
2,631,596	+				+0.3
2,631,621	-				+0.7
2,631,621	-				+1.5
2,631,621	-				+1.1
2,631,623	+				-0.9
2,631,624	-				+1.4
2,631,626	-				+0.0
2,631,626	-				-1.2
2,631,669	+				+1.7
2,631,749	+				-0.5
2,631,754	+				+0.4
2,631,762	-				+2.1
2,631,767	-				-1.3
2,631,767	-				+1.0
2,631,773	+				-1.6
2,631,788	+				+1.9
2,631,790	-				+0.4
2,631,811	+				+1.2
2,631,829	-				-1.8
2,631,829	-				-0.8
2,631,841	-		CCNA_02484	0.10	-0.1
2,631,874	+		CCNA_02484	0.14	-1.9
2,631,896	-		CCNA_02484	0.17	-1.5
2,631,953	-		CCNA_02484	0.24	+0.4
2,631,994	-		CCNA_02484	0.29	-0.8
2,631,994	-		CCNA_02484	0.29	-1.0
2,632,109	+		CCNA_02484	0.43	+0.8
2,632,109	+		CCNA_02484	0.43	-0.4
2,632,109	+		CCNA_02484	0.43	+0.8
2,632,109	+		CCNA_02484	0.43	-0.8
2,632,109	+		CCNA_02484	0.43	+1.1
2,632,115	+		CCNA_02484	0.43	-0.4
2,632,117	-		CCNA_02484	0.44	-2.3
2,632,117	-		CCNA_02484	0.44	-0.5
2,632,117	-		CCNA_02484	0.44	-0.2
2,632,117	-		CCNA_02484	0.44	+1.4
2,632,165	+		CCNA_02484	0.49	-2.8
2,632,173	-		CCNA_02484	0.50	-1.0
2,632,180	+		CCNA_02484	0.51	-0.5
2,632,184	-		CCNA_02484	0.52	-1.0
2,632,234	-		CCNA_02484	0.58	-0.1
2,632,305	+		CCNA_02484	0.66	+0.8
2,632,318	+		CCNA_02484	0.68	-1.9
2,632,338	+		CCNA_02484	0.70	-1.9
2,632,338	+		CCNA_02484	0.70	-0.2
2,632,346	-		CCNA_02484	0.71	-0.6
2,632,346	-		CCNA_02484	0.71	+0.2
2,632,365	+		CCNA_02484	0.74	+0.3
2,632,380	+		CCNA_02484	0.75	-0.2
2,632,381	-		CCNA_02484	0.75	-0.8
2,632,398	+		CCNA_02484	0.78	-0.8
2,632,418	+		CCNA_02484	0.80	-1.9
2,632,446	+		CCNA_02484	0.83	+0.8
2,632,479	+		CCNA_02484	0.87	-2.1
2,632,479	+		CCNA_02484	0.87	-0.1
2,632,486	-		CCNA_02484	0.88	-1.6
2,632,487	-		CCNA_02484	0.88	+0.4
2,632,487	-		CCNA_02484	0.88	-1.0
2,632,492	-		CCNA_02484	0.89	-1.6
2,632,492	-		CCNA_02484	0.89	+0.8
2,632,567	+				-0.1
2,632,587	-				+0.1
2,632,639	-				-0.9
2,632,660	+				-0.9
2,632,668	-				-1.0
2,632,673	+				+1.5
2,632,681	-				-0.3
2,632,705	+				+0.8