Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01939
Experiment: PYE with Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with Nalidixic 0.03 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,081,099 | - | +1.7 | |||
2,081,174 | - | +2.4 | |||
2,081,974 | - | CCNA_01939 | 0.11 | +2.8 | |
2,082,010 | - | CCNA_01939 | 0.21 | +2.2 | |
2,082,045 | + | CCNA_01939 | 0.29 | -1.4 | |
2,082,045 | + | CCNA_01939 | 0.29 | -0.8 | |
2,082,053 | - | CCNA_01939 | 0.32 | +0.3 | |
2,082,087 | - | CCNA_01939 | 0.40 | +1.0 | |
2,082,191 | + | CCNA_01939 | 0.67 | +0.1 | |
2,082,216 | - | CCNA_01939 | 0.73 | +1.8 | |
2,082,257 | - | CCNA_01939 | 0.84 | +3.0 | |
2,082,288 | - | +1.1 | |||
2,082,302 | - | +1.6 | |||
2,082,302 | - | +0.7 | |||
2,082,304 | + | -0.3 | |||
2,082,304 | + | +0.6 | |||
2,082,306 | - | +1.8 | |||
2,082,312 | - | +2.2 | |||
2,082,312 | - | +2.4 |
Or see this region's nucleotide sequence