Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS05335 and AZOBR_RS05340 are separated by 741 nucleotides AZOBR_RS05340 and AZOBR_RS05345 are separated by 141 nucleotides AZOBR_RS05345 and AZOBR_RS05350 overlap by 4 nucleotides
AZOBR_RS05335: AZOBR_RS05335 - phosphate starvation protein PhoH, at 1,131,515 to 1,132,252
_RS05335
AZOBR_RS05340: AZOBR_RS05340 - septum site-determining protein MinC, at 1,132,994 to 1,133,752
_RS05340
AZOBR_RS05345: AZOBR_RS05345 - cell division inhibitor MinD, at 1,133,894 to 1,134,709
_RS05345
AZOBR_RS05350: AZOBR_RS05350 - cell division topological specificity factor, at 1,134,706 to 1,135,101
_RS05350
Position (kb)
1132
1133
1134 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1132.026 kb on + strand, within AZOBR_RS05335 at 1132.026 kb on + strand, within AZOBR_RS05335 at 1132.027 kb on - strand, within AZOBR_RS05335 at 1132.069 kb on + strand, within AZOBR_RS05335 at 1132.069 kb on + strand, within AZOBR_RS05335 at 1132.134 kb on + strand, within AZOBR_RS05335 at 1132.134 kb on + strand, within AZOBR_RS05335 at 1132.135 kb on - strand, within AZOBR_RS05335 at 1132.135 kb on - strand, within AZOBR_RS05335 at 1132.135 kb on - strand, within AZOBR_RS05335 at 1132.135 kb on - strand, within AZOBR_RS05335 at 1132.263 kb on + strand at 1132.263 kb on + strand at 1132.264 kb on - strand at 1132.470 kb on + strand at 1132.471 kb on - strand at 1132.712 kb on + strand at 1132.713 kb on - strand at 1132.713 kb on - strand at 1132.757 kb on + strand at 1132.757 kb on + strand at 1132.758 kb on - strand at 1132.903 kb on + strand at 1133.660 kb on + strand, within AZOBR_RS05340 at 1133.729 kb on + strand at 1133.872 kb on + strand at 1133.872 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 1,132,026 + AZOBR_RS05335 0.69 -0.7 1,132,026 + AZOBR_RS05335 0.69 -0.4 1,132,027 - AZOBR_RS05335 0.69 +0.0 1,132,069 + AZOBR_RS05335 0.75 -0.3 1,132,069 + AZOBR_RS05335 0.75 +0.3 1,132,134 + AZOBR_RS05335 0.84 +0.8 1,132,134 + AZOBR_RS05335 0.84 +0.4 1,132,135 - AZOBR_RS05335 0.84 -1.2 1,132,135 - AZOBR_RS05335 0.84 -0.6 1,132,135 - AZOBR_RS05335 0.84 +0.2 1,132,135 - AZOBR_RS05335 0.84 -1.0 1,132,263 + +0.6 1,132,263 + +0.0 1,132,264 - -0.2 1,132,470 + -1.9 1,132,471 - +0.1 1,132,712 + -0.1 1,132,713 - -0.6 1,132,713 - -0.1 1,132,757 + +0.5 1,132,757 + -1.8 1,132,758 - -0.2 1,132,903 + -0.2 1,133,660 + AZOBR_RS05340 0.88 -3.0 1,133,729 + -0.6 1,133,872 + +0.3 1,133,872 + -0.3
Or see this region's nucleotide sequence