Experiment: MoYLS4 with A22 0.043 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2555 and DvMF_2556 are separated by 95 nucleotides DvMF_2556 and DvMF_2557 are separated by 20 nucleotides DvMF_2557 and DvMF_2558 are separated by 632 nucleotides
DvMF_2555: DvMF_2555 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,229,034 to 3,230,371
_2555
DvMF_2556: DvMF_2556 - hypothetical protein (RefSeq), at 3,230,467 to 3,231,126
_2556
DvMF_2557: DvMF_2557 - hypothetical protein (RefSeq), at 3,231,147 to 3,232,502
_2557
DvMF_2558: DvMF_2558 - hypothetical protein (RefSeq), at 3,233,135 to 3,234,550
_2558
Position (kb)
3231
3232
3233 Strain fitness (log2 ratio)
-1
0
1 at 3230.309 kb on - strand at 3230.455 kb on - strand at 3230.510 kb on + strand at 3230.568 kb on - strand, within DvMF_2556 at 3230.880 kb on - strand, within DvMF_2556 at 3230.975 kb on + strand, within DvMF_2556 at 3231.083 kb on + strand at 3231.083 kb on + strand at 3231.161 kb on + strand at 3231.161 kb on + strand at 3231.205 kb on + strand at 3231.366 kb on + strand, within DvMF_2557 at 3231.634 kb on + strand, within DvMF_2557 at 3231.676 kb on + strand, within DvMF_2557 at 3231.746 kb on - strand, within DvMF_2557 at 3231.836 kb on + strand, within DvMF_2557 at 3231.842 kb on + strand, within DvMF_2557 at 3231.852 kb on - strand, within DvMF_2557 at 3231.852 kb on - strand, within DvMF_2557 at 3231.964 kb on - strand, within DvMF_2557 at 3232.858 kb on + strand at 3233.051 kb on + strand at 3233.066 kb on + strand at 3233.074 kb on - strand at 3233.076 kb on + strand at 3233.076 kb on + strand at 3233.076 kb on + strand at 3233.155 kb on + strand at 3233.400 kb on + strand, within DvMF_2558 at 3233.444 kb on - strand, within DvMF_2558
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with A22 0.043 mg/ml remove 3,230,309 - +0.9 3,230,455 - +0.2 3,230,510 + +1.2 3,230,568 - DvMF_2556 0.15 +1.0 3,230,880 - DvMF_2556 0.63 +0.9 3,230,975 + DvMF_2556 0.77 +1.0 3,231,083 + +1.1 3,231,083 + +1.0 3,231,161 + +1.2 3,231,161 + +1.1 3,231,205 + +0.9 3,231,366 + DvMF_2557 0.16 +1.1 3,231,634 + DvMF_2557 0.36 +0.9 3,231,676 + DvMF_2557 0.39 +0.8 3,231,746 - DvMF_2557 0.44 +1.2 3,231,836 + DvMF_2557 0.51 +1.2 3,231,842 + DvMF_2557 0.51 +1.0 3,231,852 - DvMF_2557 0.52 +1.2 3,231,852 - DvMF_2557 0.52 +1.0 3,231,964 - DvMF_2557 0.60 +1.1 3,232,858 + +0.5 3,233,051 + -0.1 3,233,066 + +0.0 3,233,074 - +0.7 3,233,076 + +0.4 3,233,076 + +0.5 3,233,076 + +0.0 3,233,155 + -1.5 3,233,400 + DvMF_2558 0.19 -1.7 3,233,444 - DvMF_2558 0.22 -0.4
Or see this region's nucleotide sequence