Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2543
Experiment: MoYLS4 with A22 0.043 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.043 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,213,812 | + | DvMF_2542 | 0.60 | -0.4 | |
| 3,213,964 | + | DvMF_2542 | 0.69 | -0.4 | |
| 3,214,268 | + | DvMF_2542 | 0.86 | -0.3 | |
| 3,214,453 | + | -0.6 | |||
| 3,214,463 | + | -0.4 | |||
| 3,214,482 | - | -0.3 | |||
| 3,214,536 | + | -0.7 | |||
| 3,214,771 | - | DvMF_2543 | 0.47 | -0.1 | |
| 3,214,855 | + | DvMF_2543 | 0.70 | -1.3 | |
| 3,214,986 | + | -0.3 | |||
| 3,215,245 | - | DvMF_2544 | 0.18 | -0.1 | |
| 3,215,476 | + | DvMF_2544 | 0.33 | -0.1 | |
| 3,215,476 | + | DvMF_2544 | 0.33 | -0.2 | |
| 3,215,541 | - | DvMF_2544 | 0.37 | -1.0 | |
| 3,215,552 | + | DvMF_2544 | 0.38 | -0.4 | |
| 3,215,898 | + | DvMF_2544 | 0.61 | -0.1 | |
| 3,215,908 | + | DvMF_2544 | 0.61 | +0.0 |
Or see this region's nucleotide sequence