Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2472
Experiment: MoYLS4 with A22 0.043 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.043 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,116,361 | + | -1.3 | |||
3,116,405 | + | DvMF_2471 | 0.11 | -0.7 | |
3,116,649 | + | DvMF_2471 | 0.45 | -0.6 | |
3,116,662 | - | DvMF_2471 | 0.46 | -0.1 | |
3,116,714 | - | DvMF_2471 | 0.54 | -0.9 | |
3,116,967 | - | DvMF_2471 | 0.88 | -0.1 | |
3,117,084 | - | -0.1 | |||
3,117,509 | + | DvMF_2472 | 0.17 | -0.5 | |
3,117,659 | + | DvMF_2472 | 0.31 | +0.1 | |
3,117,719 | - | DvMF_2472 | 0.37 | -0.2 | |
3,118,069 | - | DvMF_2472 | 0.71 | +0.8 | |
3,118,266 | + | -0.1 | |||
3,118,409 | + | -0.4 | |||
3,118,480 | + | -0.0 | |||
3,118,637 | + | DvMF_2473 | 0.17 | -0.5 | |
3,118,642 | + | DvMF_2473 | 0.17 | -0.3 | |
3,118,935 | + | DvMF_2473 | 0.40 | +0.7 | |
3,119,004 | - | DvMF_2473 | 0.45 | -0.3 | |
3,119,047 | - | DvMF_2473 | 0.48 | -0.2 | |
3,119,262 | + | DvMF_2473 | 0.65 | -0.1 |
Or see this region's nucleotide sequence