Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2251
Experiment: MoYLS4 with A22 0.043 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.043 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,827,445 | - | DvMF_2250 | 0.57 | -0.0 | |
| 2,827,554 | + | DvMF_2250 | 0.66 | -0.3 | |
| 2,827,688 | - | DvMF_2250 | 0.77 | -0.3 | |
| 2,827,745 | - | DvMF_2250 | 0.82 | -0.6 | |
| 2,827,785 | + | DvMF_2250 | 0.85 | -0.8 | |
| 2,827,801 | + | DvMF_2250 | 0.86 | -0.6 | |
| 2,827,809 | - | DvMF_2250 | 0.87 | -0.3 | |
| 2,828,090 | - | -0.4 | |||
| 2,828,415 | + | DvMF_2251 | 0.27 | -0.7 | |
| 2,828,575 | - | DvMF_2251 | 0.59 | -0.8 | |
| 2,828,597 | - | DvMF_2251 | 0.64 | -1.3 | |
| 2,828,764 | + | -0.5 | |||
| 2,829,038 | - | +0.0 | |||
| 2,829,103 | - | DvMF_2252 | 0.11 | +0.2 | |
| 2,829,220 | + | DvMF_2252 | 0.15 | -0.5 | |
| 2,829,313 | - | DvMF_2252 | 0.18 | -0.6 | |
| 2,829,430 | + | DvMF_2252 | 0.22 | -0.4 | |
| 2,829,491 | + | DvMF_2252 | 0.24 | -0.6 | |
| 2,829,536 | + | DvMF_2252 | 0.26 | -0.3 | |
| 2,829,585 | + | DvMF_2252 | 0.27 | -0.1 | |
| 2,829,754 | - | DvMF_2252 | 0.33 | -0.5 |
Or see this region's nucleotide sequence