Experiment: MoYLS4 with A22 0.043 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1797 and DvMF_1798 are separated by 69 nucleotides DvMF_1798 and DvMF_1799 are separated by 188 nucleotides
DvMF_1797: DvMF_1797 - molybdenum cofactor synthesis domain protein (RefSeq), at 2,196,700 to 2,198,667
_1797
DvMF_1798: DvMF_1798 - sigma54 specific transcriptional acivator, PspF, Fis family (RefSeq), at 2,198,737 to 2,200,041
_1798
DvMF_1799: DvMF_1799 - phage shock protein A, PspA (RefSeq), at 2,200,230 to 2,200,961
_1799
Position (kb)
2198
2199
2200
2201 Strain fitness (log2 ratio)
-2
-1
0
1 at 2197.855 kb on - strand, within DvMF_1797 at 2197.928 kb on - strand, within DvMF_1797 at 2197.933 kb on + strand, within DvMF_1797 at 2197.982 kb on - strand, within DvMF_1797 at 2198.080 kb on + strand, within DvMF_1797 at 2198.399 kb on + strand, within DvMF_1797 at 2198.464 kb on + strand, within DvMF_1797 at 2198.805 kb on - strand at 2198.839 kb on + strand at 2198.847 kb on - strand at 2198.847 kb on - strand at 2198.961 kb on + strand, within DvMF_1798 at 2198.961 kb on + strand, within DvMF_1798 at 2198.969 kb on - strand, within DvMF_1798 at 2198.986 kb on + strand, within DvMF_1798 at 2198.986 kb on + strand, within DvMF_1798 at 2198.994 kb on - strand, within DvMF_1798 at 2199.045 kb on + strand, within DvMF_1798 at 2199.093 kb on + strand, within DvMF_1798 at 2199.149 kb on + strand, within DvMF_1798 at 2199.205 kb on - strand, within DvMF_1798 at 2199.369 kb on - strand, within DvMF_1798 at 2199.369 kb on - strand, within DvMF_1798 at 2199.391 kb on - strand, within DvMF_1798 at 2199.419 kb on - strand, within DvMF_1798 at 2199.491 kb on - strand, within DvMF_1798 at 2199.659 kb on + strand, within DvMF_1798 at 2200.196 kb on + strand at 2200.292 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with A22 0.043 mg/ml remove 2,197,855 - DvMF_1797 0.59 +0.7 2,197,928 - DvMF_1797 0.62 +0.3 2,197,933 + DvMF_1797 0.63 -0.8 2,197,982 - DvMF_1797 0.65 +0.3 2,198,080 + DvMF_1797 0.70 -1.2 2,198,399 + DvMF_1797 0.86 +0.4 2,198,464 + DvMF_1797 0.90 +0.3 2,198,805 - -1.6 2,198,839 + -0.9 2,198,847 - -1.4 2,198,847 - -1.3 2,198,961 + DvMF_1798 0.17 -1.2 2,198,961 + DvMF_1798 0.17 -2.4 2,198,969 - DvMF_1798 0.18 -1.5 2,198,986 + DvMF_1798 0.19 -0.8 2,198,986 + DvMF_1798 0.19 +0.6 2,198,994 - DvMF_1798 0.20 -1.3 2,199,045 + DvMF_1798 0.24 -0.4 2,199,093 + DvMF_1798 0.27 -0.8 2,199,149 + DvMF_1798 0.32 -1.1 2,199,205 - DvMF_1798 0.36 -1.5 2,199,369 - DvMF_1798 0.48 -1.0 2,199,369 - DvMF_1798 0.48 -0.6 2,199,391 - DvMF_1798 0.50 -1.2 2,199,419 - DvMF_1798 0.52 -1.4 2,199,491 - DvMF_1798 0.58 -1.1 2,199,659 + DvMF_1798 0.71 -1.0 2,200,196 + -0.0 2,200,292 + -1.2
Or see this region's nucleotide sequence