Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0118
Experiment: MoYLS4 with A22 0.043 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.043 mg/ml |
---|---|---|---|---|---|
remove | |||||
127,488 | - | -0.9 | |||
127,597 | + | -0.4 | |||
127,719 | - | -0.2 | |||
127,719 | - | -0.5 | |||
127,778 | + | DvMF_0117 | 0.15 | -0.2 | |
128,111 | + | DvMF_0117 | 0.55 | -0.5 | |
128,303 | - | DvMF_0117 | 0.78 | +0.2 | |
128,310 | + | DvMF_0117 | 0.79 | -1.1 | |
128,390 | + | DvMF_0117 | 0.89 | +0.1 | |
128,702 | + | DvMF_0118 | 0.24 | -0.8 | |
128,712 | - | DvMF_0118 | 0.25 | -1.5 | |
128,734 | - | DvMF_0118 | 0.27 | -0.8 | |
128,784 | - | DvMF_0118 | 0.32 | -0.5 | |
128,784 | - | DvMF_0118 | 0.32 | -0.4 | |
128,802 | + | DvMF_0118 | 0.34 | -1.0 | |
129,442 | - | -0.5 | |||
129,493 | - | -0.8 | |||
129,582 | + | DvMF_0119 | 0.16 | -0.7 | |
129,676 | + | DvMF_0119 | 0.25 | -0.5 | |
129,684 | - | DvMF_0119 | 0.26 | -1.1 | |
129,767 | + | DvMF_0119 | 0.34 | -1.7 | |
129,767 | + | DvMF_0119 | 0.34 | -0.9 | |
129,843 | + | DvMF_0119 | 0.41 | -0.6 | |
130,103 | - | DvMF_0119 | 0.66 | -0.1 |
Or see this region's nucleotide sequence