Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1108

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,298,407	-		Pf6N2E2_1107	0.81	+0.0
1,298,589	+		Pf6N2E2_1107	0.85	+0.3
1,298,589	+		Pf6N2E2_1107	0.85	-0.8
1,298,590	-		Pf6N2E2_1107	0.85	-0.5
1,298,590	-		Pf6N2E2_1107	0.85	+0.2
1,298,592	+		Pf6N2E2_1107	0.85	+0.5
1,298,592	+		Pf6N2E2_1107	0.85	-0.1
1,298,592	+		Pf6N2E2_1107	0.85	-1.8
1,298,593	-		Pf6N2E2_1107	0.85	+0.3
1,298,613	+		Pf6N2E2_1107	0.85	+0.1
1,298,613	+		Pf6N2E2_1107	0.85	+0.3
1,298,613	+		Pf6N2E2_1107	0.85	-1.7
1,298,614	-		Pf6N2E2_1107	0.85	-0.1
1,298,614	-		Pf6N2E2_1107	0.85	+0.3
1,298,614	-		Pf6N2E2_1107	0.85	-0.0
1,298,614	-		Pf6N2E2_1107	0.85	-0.2
1,298,614	-		Pf6N2E2_1107	0.85	+0.8
1,298,614	-		Pf6N2E2_1107	0.85	+0.3
1,298,614	-		Pf6N2E2_1107	0.85	-0.6
1,298,818	-		Pf6N2E2_1107	0.89	-0.3
1,298,831	-		Pf6N2E2_1107	0.90	-0.7
1,299,088	+				+1.3
1,299,267	+				+0.2
1,299,267	+				+0.3
1,299,267	+				+0.1
1,299,267	+				-0.6
1,299,267	+				+0.3
1,299,267	+				-0.3
1,299,268	-				-0.2
1,299,268	-				-0.4
1,299,268	-				+0.8
1,299,268	-				+0.0
1,299,268	-				-0.4
1,299,357	+				+0.0
1,299,667	+		Pf6N2E2_1108	0.29	-1.2
1,300,049	-		Pf6N2E2_1108	0.65	+0.5
1,300,059	+		Pf6N2E2_1108	0.66	-0.9
1,300,070	+		Pf6N2E2_1108	0.67	-0.8
1,300,103	+		Pf6N2E2_1108	0.70	+0.2
1,300,103	+		Pf6N2E2_1108	0.70	-0.2
1,300,103	+		Pf6N2E2_1108	0.70	+0.1
1,300,104	-		Pf6N2E2_1108	0.70	-0.1
1,300,359	+				+0.4
1,300,359	+				+0.1
1,300,360	-				-0.2
1,300,360	-				-0.4
1,300,462	-				-0.6
1,300,490	-				+0.0
1,300,490	-				+0.5
1,300,527	-				-0.5
1,300,536	-				-0.7
1,300,548	+				+0.2
1,300,644	+				-0.2
1,300,645	-				+0.1
1,300,906	-		Pf6N2E2_1109	0.26	+0.1
1,300,906	-		Pf6N2E2_1109	0.26	+0.2
1,300,978	-		Pf6N2E2_1109	0.32	-0.1
1,300,978	-		Pf6N2E2_1109	0.32	-0.6
1,300,978	-		Pf6N2E2_1109	0.32	-0.4
1,300,978	-		Pf6N2E2_1109	0.32	-0.0
1,300,978	-		Pf6N2E2_1109	0.32	+0.6
1,301,064	+		Pf6N2E2_1109	0.39	-0.1
1,301,065	-		Pf6N2E2_1109	0.39	+0.9
1,301,065	-		Pf6N2E2_1109	0.39	+0.3
1,301,065	-		Pf6N2E2_1109	0.39	-0.9
1,301,065	-		Pf6N2E2_1109	0.39	-0.3
1,301,065	-		Pf6N2E2_1109	0.39	-0.1
1,301,116	-		Pf6N2E2_1109	0.43	-0.2
1,301,186	-		Pf6N2E2_1109	0.49	-0.5
1,301,363	+		Pf6N2E2_1109	0.63	-0.5