Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03265

Experiment: PYE with Carbenicillin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.25 mg/ml
3,433,962	+		CCNA_03263	0.71	-0.2
3,433,996	+		CCNA_03263	0.72	-1.4
3,434,004	+		CCNA_03263	0.72	+0.8
3,434,004	+		CCNA_03263	0.72	-0.7
3,434,012	-		CCNA_03263	0.73	+0.1
3,434,012	-		CCNA_03263	0.73	+0.3
3,434,012	-		CCNA_03263	0.73	+0.2
3,434,012	-		CCNA_03263	0.73	-0.7
3,434,016	+		CCNA_03263	0.73	+0.4
3,434,021	+		CCNA_03263	0.73	-0.3
3,434,122	+		CCNA_03263	0.77	+0.8
3,434,123	-		CCNA_03263	0.77	-1.0
3,434,123	-		CCNA_03263	0.77	-0.8
3,434,128	-		CCNA_03263	0.77	-0.6
3,434,149	-		CCNA_03263	0.78	-0.1
3,434,153	+		CCNA_03263	0.78	-0.7
3,434,153	+		CCNA_03263	0.78	-0.1
3,434,153	+		CCNA_03263	0.78	-2.1
3,434,153	+		CCNA_03263	0.78	-1.5
3,434,153	+		CCNA_03263	0.78	-0.3
3,434,153	+		CCNA_03263	0.78	-0.0
3,434,153	+		CCNA_03263	0.78	-0.7
3,434,153	+		CCNA_03263	0.78	+0.6
3,434,153	+		CCNA_03263	0.78	-0.1
3,434,153	+		CCNA_03263	0.78	-2.4
3,434,153	+		CCNA_03263	0.78	+0.3
3,434,153	+		CCNA_03263	0.78	+0.2
3,434,153	+		CCNA_03263	0.78	+0.6
3,434,161	-		CCNA_03263	0.78	-1.3
3,434,161	-		CCNA_03263	0.78	-0.8
3,434,161	-		CCNA_03263	0.78	-1.5
3,434,161	-		CCNA_03263	0.78	-2.5
3,434,196	+		CCNA_03263	0.79	+0.1
3,434,255	-		CCNA_03263	0.81	+0.6
3,434,255	-		CCNA_03263	0.81	-1.7
3,434,255	-		CCNA_03263	0.81	+0.2
3,434,346	+		CCNA_03263	0.85	-1.8
3,434,366	+		CCNA_03263	0.85	-0.3
3,434,366	+		CCNA_03263	0.85	-1.0
3,434,366	+		CCNA_03263	0.85	-0.1
3,434,374	-		CCNA_03263	0.86	-0.5
3,434,374	-		CCNA_03263	0.86	-0.7
3,434,374	-		CCNA_03263	0.86	-1.0
3,434,374	-		CCNA_03263	0.86	-1.2
3,434,430	+		CCNA_03263	0.88	-0.3
3,434,430	+		CCNA_03263	0.88	-1.9
3,434,452	-		CCNA_03263	0.88	-0.7
3,434,453	-		CCNA_03263	0.88	+0.5
3,434,469	+		CCNA_03263	0.89	-1.3
3,434,469	+		CCNA_03263	0.89	-0.2
3,434,471	+		CCNA_03263	0.89	-0.3
3,434,476	+		CCNA_03263	0.89	+0.6
3,434,476	+		CCNA_03263	0.89	-0.4
3,434,476	+		CCNA_03263	0.89	+0.2
3,434,479	-		CCNA_03263	0.89	-2.6
3,434,494	-		CCNA_03263	0.90	+1.0
3,434,494	-		CCNA_03263	0.90	+0.4
3,434,505	+				-1.7
3,434,540	+				-1.0
3,434,548	-				-1.0
3,434,550	+				-1.0
3,434,573	+				-0.2
3,434,579	+				+1.8
3,434,596	+				+0.8
3,434,685	+				+0.3
3,434,686	-				-0.4
3,434,694	+				+0.6
3,434,702	-				-0.6
3,434,712	-				+0.8
3,434,712	-				+0.1
3,434,737	+				+0.4
3,434,750	-				+0.1
3,434,779	+				+0.2
3,434,779	+				+0.2
3,434,779	+				-0.2
3,434,866	-				+0.7
3,434,866	-				-0.9
3,434,898	-				+1.7
3,434,929	+				+0.7
3,434,929	+				+0.1
3,434,935	+				+0.5
3,434,942	+				+0.0
3,434,981	-				-0.6
3,435,006	+				+0.2
3,435,012	+				-0.1
3,435,014	-				+0.7
3,435,076	-				-0.9
3,435,083	+				+0.4
3,435,083	+				+0.8
3,435,083	+				+1.1
3,435,115	-		CCNA_03265	0.11	+0.2
3,435,116	+		CCNA_03265	0.11	+0.8
3,435,117	+		CCNA_03265	0.11	-0.2
3,435,124	-		CCNA_03265	0.11	+0.0
3,435,140	+		CCNA_03265	0.12	+0.1
3,435,160	-		CCNA_03265	0.13	-2.3
3,435,189	-		CCNA_03265	0.15	-0.6
3,435,214	-		CCNA_03265	0.17	+1.4
3,435,216	-		CCNA_03265	0.17	+1.7
3,435,216	-		CCNA_03265	0.17	-0.3
3,435,216	-		CCNA_03265	0.17	+0.3
3,435,279	+		CCNA_03265	0.21	+0.6
3,435,289	+		CCNA_03265	0.22	+0.3
3,435,302	-		CCNA_03265	0.23	-0.8
3,435,317	-		CCNA_03265	0.24	-2.0
3,435,394	+		CCNA_03265	0.29	+2.6
3,435,412	-		CCNA_03265	0.30	+0.9
3,435,412	-		CCNA_03265	0.30	+0.6
3,435,435	+		CCNA_03265	0.31	+1.0
3,435,448	-		CCNA_03265	0.32	+1.1
3,435,449	+		CCNA_03265	0.32	+1.5
3,435,470	+		CCNA_03265	0.34	+2.3
3,435,478	-		CCNA_03265	0.34	-0.9
3,435,478	-		CCNA_03265	0.34	-1.0
3,435,478	-		CCNA_03265	0.34	-0.0
3,435,504	+		CCNA_03265	0.36	+0.9
3,435,515	+		CCNA_03265	0.37	+1.7
3,435,563	-		CCNA_03265	0.40	-0.2
3,435,565	+		CCNA_03265	0.40	+0.6
3,435,607	+		CCNA_03265	0.43	-0.2
3,435,622	+		CCNA_03265	0.44	+1.0
3,435,653	-		CCNA_03265	0.46	-0.3
3,435,712	+		CCNA_03265	0.49	+0.1
3,435,760	+		CCNA_03265	0.53	+1.8
3,435,760	+		CCNA_03265	0.53	+1.5
3,435,771	+		CCNA_03265	0.53	+4.2
3,435,786	-		CCNA_03265	0.54	+0.3
3,435,809	+		CCNA_03265	0.56	+0.7
3,435,809	+		CCNA_03265	0.56	+1.2
3,435,809	+		CCNA_03265	0.56	+1.3
3,435,809	+		CCNA_03265	0.56	+1.0
3,435,820	-		CCNA_03265	0.56	-1.3
3,435,827	-		CCNA_03265	0.57	-0.4
3,435,920	-		CCNA_03265	0.63	-0.5
3,435,948	-		CCNA_03265	0.65	+0.8
3,435,948	-		CCNA_03265	0.65	-0.5
3,435,956	-		CCNA_03265	0.65	-0.4
3,435,994	-		CCNA_03265	0.68	-0.3
3,435,996	+		CCNA_03265	0.68	+0.4
3,436,055	+		CCNA_03265	0.72	+0.7
3,436,055	+		CCNA_03265	0.72	+0.7
3,436,055	+		CCNA_03265	0.72	+0.1
3,436,063	-		CCNA_03265	0.72	-0.7
3,436,065	+		CCNA_03265	0.72	+2.4
3,436,065	+		CCNA_03265	0.72	+1.1
3,436,073	-		CCNA_03265	0.73	-0.6
3,436,096	+		CCNA_03265	0.74	+3.2
3,436,114	-		CCNA_03265	0.76	+0.3
3,436,167	+		CCNA_03265	0.79	-0.0
3,436,167	+		CCNA_03265	0.79	+0.2
3,436,167	+		CCNA_03265	0.79	+0.4
3,436,175	-		CCNA_03265	0.80	-0.6
3,436,175	-		CCNA_03265	0.80	-1.9
3,436,188	+		CCNA_03265	0.80	+1.4
3,436,188	+		CCNA_03265	0.80	+1.2
3,436,196	-		CCNA_03265	0.81	-1.7
3,436,196	-		CCNA_03265	0.81	+0.1
3,436,198	-		CCNA_03265	0.81	+2.8
3,436,221	+		CCNA_03265	0.83	+0.1
3,436,221	+		CCNA_03265	0.83	+1.0
3,436,221	+		CCNA_03265	0.83	-0.1
3,436,229	-		CCNA_03265	0.83	-0.1
3,436,229	-		CCNA_03265	0.83	-1.0
3,436,251	-		CCNA_03265	0.85	-0.5
3,436,251	-		CCNA_03265	0.85	+0.8
3,436,282	-		CCNA_03265	0.87	-1.4
3,436,405	+				+0.6
3,436,410	+				-0.9
3,436,413	-				-2.0
3,436,430	+				+1.8
3,436,438	-				-1.5
3,436,457	+				+0.6
3,436,510	-				-0.7
3,436,538	-				+1.1
3,436,570	+				+0.6
3,436,582	+				-0.9
3,436,590	-				-1.2
3,436,590	-				+0.6
3,436,617	-				-0.8
3,436,637	-				-0.2
3,436,637	-				-0.0
3,436,642	-				-0.3
3,436,661	-				+1.0
3,436,676	-				+0.8
3,436,676	-				-0.3
3,436,696	+				-2.4
3,436,703	-		CCNA_03266	0.10	+0.0
3,436,737	+		CCNA_03266	0.20	-0.0
3,436,738	-		CCNA_03266	0.21	-0.9
3,436,763	-		CCNA_03266	0.28	+0.5
3,436,852	+		CCNA_03266	0.56	-0.4
3,436,852	+		CCNA_03266	0.56	+0.7
3,436,860	-		CCNA_03266	0.58	+0.5
3,436,860	-		CCNA_03266	0.58	+0.2
3,436,860	-		CCNA_03266	0.58	+0.0
3,436,872	-		CCNA_03266	0.62	+0.3
3,436,873	+		CCNA_03266	0.62	-0.1
3,436,894	+		CCNA_03266	0.69	+0.6
3,436,897	-		CCNA_03266	0.69	+1.0
3,436,916	-		CCNA_03266	0.75	+0.6
3,436,916	-		CCNA_03266	0.75	+0.2
3,436,921	+		CCNA_03266	0.77	+0.2
3,436,923	+		CCNA_03266	0.77	+0.3
3,436,931	-		CCNA_03266	0.80	-0.8
3,436,935	+		CCNA_03266	0.81	+1.0
3,436,953	+		CCNA_03266	0.87	+1.5
3,436,953	+		CCNA_03266	0.87	-1.3
3,436,953	+		CCNA_03266	0.87	-0.8
3,436,961	-		CCNA_03266	0.89	-2.7
3,436,961	-		CCNA_03266	0.89	-1.0
3,436,961	-		CCNA_03266	0.89	+1.4
3,436,961	-		CCNA_03266	0.89	+0.2
3,436,961	-		CCNA_03266	0.89	-0.6
3,436,961	-		CCNA_03266	0.89	+1.0
3,436,963	-		CCNA_03266	0.90	-1.5
3,436,982	-				+0.1
3,436,982	-				+0.3
3,436,991	+				+0.8
3,436,991	+				+4.0
3,436,991	+				+0.3
3,436,991	+				+1.1
3,436,999	+				-0.0
3,436,999	-				-0.1
3,436,999	-				+0.1
3,436,999	-				-0.1
3,436,999	-				+0.5
3,436,999	-				+0.4
3,437,052	+				+0.6
3,437,060	-				+0.3
3,437,083	-				-0.9
3,437,083	-				-1.1
3,437,102	+				+0.3
3,437,102	+				-0.0
3,437,110	-				-2.5
3,437,128	-				-0.9
3,437,130	-				-2.0
3,437,167	+				-0.4
3,437,184	+				-1.1
3,437,221	-				-0.8
3,437,243	+				+1.9
3,437,243	+				+2.3
3,437,243	+				+2.1
3,437,251	-				-0.6
3,437,262	-				+1.6
3,437,262	-				-0.3
3,437,264	+				-1.0
3,437,280	+				-0.3
3,437,355	+				+1.1
3,437,355	+				+0.8
3,437,355	+				+1.2
3,437,397	-		CCNA_03267	0.16	+3.4
3,437,461	-		CCNA_03267	0.31	+0.6
3,437,464	+		CCNA_03267	0.31	-0.3
3,437,472	-		CCNA_03267	0.33	+1.8