Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02155

Experiment: PYE with Carbenicillin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.25 mg/ml
2,309,867	+		CCNA_02153	0.72	-0.3
2,309,937	-		CCNA_02153	0.80	+0.1
2,309,960	-		CCNA_02153	0.82	-0.2
2,309,965	-		CCNA_02153	0.83	-0.1
2,309,970	+		CCNA_02153	0.83	+0.4
2,309,990	+		CCNA_02153	0.85	-0.3
2,310,002	+		CCNA_02153	0.87	-0.1
2,310,095	+				+1.5
2,310,103	-				-0.8
2,310,131	+				-0.1
2,310,131	+				-1.1
2,310,131	+				-1.3
2,310,131	+				-2.1
2,310,131	+				-1.8
2,310,131	+				-1.1
2,310,131	+				-1.1
2,310,131	+				-1.4
2,310,131	+				+0.5
2,310,131	+				-1.5
2,310,131	+				-0.7
2,310,131	+				+1.3
2,310,131	+				-0.3
2,310,139	-				-1.3
2,310,139	-				+2.5
2,310,139	-				+0.3
2,310,139	-				+0.6
2,310,139	-				+0.2
2,310,139	-				-0.2
2,310,139	-				-2.0
2,310,139	-				-0.1
2,310,139	-				-0.5
2,310,139	-				+0.1
2,310,139	-				+0.2
2,310,139	-				-0.5
2,310,139	-				-0.6
2,310,139	-				-2.0
2,310,139	-				-0.8
2,310,139	-				-1.2
2,310,139	-				+0.4
2,310,139	-				-1.7
2,310,139	-				-0.1
2,310,139	-				-0.6
2,310,139	-				-1.5
2,310,139	-				-0.5
2,310,139	-				-0.6
2,310,163	-				+0.1
2,310,182	+				-1.3
2,310,205	-		CCNA_02154	0.12	-2.4
2,310,207	-		CCNA_02154	0.12	+0.8
2,310,215	-		CCNA_02154	0.14	-1.1
2,310,230	-		CCNA_02154	0.17	+0.3
2,310,242	-		CCNA_02154	0.19	+0.3
2,310,249	-		CCNA_02154	0.20	-1.5
2,310,251	+				+1.0
2,310,259	-		CCNA_02154	0.22	+0.2
2,310,277	+		CCNA_02154	0.25	-1.9
2,310,284	+		CCNA_02154	0.27	+0.7
2,310,298	+		CCNA_02154	0.29	-0.3
2,310,326	-		CCNA_02154	0.34	+0.2
2,310,326	-		CCNA_02154	0.34	-1.4
2,310,340	-		CCNA_02154	0.37	-0.3
2,310,392	-		CCNA_02154	0.47	-0.5
2,310,419	+		CCNA_02154	0.52	+1.3
2,310,426	+		CCNA_02154	0.53	-0.9
2,310,487	+		CCNA_02154	0.64	+0.4
2,310,487	+		CCNA_02154	0.64	-0.3
2,310,505	-		CCNA_02154	0.68	-2.0
2,310,507	+		CCNA_02154	0.68	+2.7
2,310,507	+		CCNA_02154	0.68	-0.4
2,310,515	-		CCNA_02154	0.70	-0.9
2,310,559	+		CCNA_02154	0.78	+0.4
2,310,568	+		CCNA_02154	0.80	-1.1
2,310,569	+		CCNA_02154	0.80	+0.0
2,310,594	+		CCNA_02154	0.84	+2.1
2,310,655	+				-0.8
2,310,681	+				-0.4
2,310,681	+				+0.5
2,310,699	+				-0.4
2,310,714	+				-0.4
2,310,722	-				-1.4
2,310,728	+				-1.5
2,310,728	+				+0.2
2,310,733	+				-0.8
2,310,736	-				-1.7
2,310,736	-				-0.8
2,310,736	-				-1.8
2,310,770	+				-0.5
2,310,770	+				-1.1
2,310,873	+				-0.4
2,310,878	+				-2.3
2,310,895	+				-0.6
2,310,903	-				-1.1
2,310,922	-				-1.3
2,310,922	-				-1.0
2,310,937	-				-1.7
2,310,937	-				-1.7
2,310,992	-		CCNA_02155	0.12	-2.7
2,311,014	-		CCNA_02155	0.14	-1.0
2,311,021	+		CCNA_02155	0.15	-0.3
2,311,047	+		CCNA_02155	0.17	+1.5
2,311,048	-		CCNA_02155	0.17	-2.0
2,311,056	-		CCNA_02155	0.18	+0.6
2,311,066	-		CCNA_02155	0.19	-0.5
2,311,105	-		CCNA_02155	0.22	+0.0
2,311,147	-		CCNA_02155	0.26	-0.9
2,311,152	+		CCNA_02155	0.26	+0.2
2,311,175	+		CCNA_02155	0.28	-1.7
2,311,183	+		CCNA_02155	0.29	-2.3
2,311,191	-		CCNA_02155	0.29	-0.3
2,311,260	-		CCNA_02155	0.35	+0.9
2,311,260	-		CCNA_02155	0.35	-0.2
2,311,277	+		CCNA_02155	0.37	-0.5
2,311,283	+		CCNA_02155	0.37	+0.4
2,311,283	+		CCNA_02155	0.37	-1.5
2,311,291	-		CCNA_02155	0.38	-0.3
2,311,302	+		CCNA_02155	0.39	-1.3
2,311,307	+		CCNA_02155	0.39	-2.2
2,311,307	+		CCNA_02155	0.39	-2.3
2,311,307	+		CCNA_02155	0.39	-1.6
2,311,315	-		CCNA_02155	0.40	-0.9
2,311,330	-		CCNA_02155	0.41	-0.3
2,311,383	-		CCNA_02155	0.46	+0.3
2,311,397	+		CCNA_02155	0.47	+0.5
2,311,397	+		CCNA_02155	0.47	+0.1
2,311,397	+		CCNA_02155	0.47	-0.3
2,311,405	-		CCNA_02155	0.47	-1.0
2,311,421	+		CCNA_02155	0.49	-1.4
2,311,473	+		CCNA_02155	0.53	+0.3
2,311,498	+		CCNA_02155	0.55	+0.0
2,311,519	-		CCNA_02155	0.57	-1.7
2,311,519	-		CCNA_02155	0.57	-0.6
2,311,594	+		CCNA_02155	0.63	-0.1
2,311,694	+		CCNA_02155	0.72	+0.2
2,311,717	+		CCNA_02155	0.74	-0.3
2,311,744	-		CCNA_02155	0.76	-1.9
2,311,813	+		CCNA_02155	0.82	-0.4
2,311,813	+		CCNA_02155	0.82	-0.5
2,311,821	+				+2.0
2,311,825	+		CCNA_02155	0.83	-1.1
2,311,862	-		CCNA_02155	0.86	-1.4
2,311,872	+		CCNA_02155	0.87	-0.3
2,311,917	+				+1.9
2,311,921	+				-0.8
2,311,924	-				-1.3
2,311,925	-				+1.0
2,311,929	-				-0.7
2,311,929	-				-1.2
2,311,949	+				-0.7
2,311,957	-				+0.7
2,311,957	-				+0.2
2,311,957	-				-2.5
2,311,957	-				-1.1
2,311,986	+				+0.2
2,311,991	+				+0.7
2,311,999	-				+0.3
2,311,999	-				+0.0
2,311,999	-				-0.4
2,311,999	-				-1.9
2,312,001	+				-1.2
2,312,018	+				-2.5
2,312,018	+				-1.6
2,312,019	+				-0.4
2,312,026	-				-1.4
2,312,026	-				-2.8
2,312,026	-				-0.6
2,312,027	+				+0.2
2,312,027	+				-0.4
2,312,043	-				-1.8
2,312,043	-				+1.3
2,312,050	+				-0.6
2,312,055	+				+0.5
2,312,058	-				+0.8
2,312,058	-				-0.4
2,312,058	-				-0.8
2,312,058	-				-1.0
2,312,069	+				+0.1
2,312,077	-				+1.8
2,312,077	-				+1.4
2,312,111	-				+2.5
2,312,111	-				+1.6
2,312,160	-				+1.0
2,312,226	-		CCNA_02156	0.13	+1.8
2,312,250	+		CCNA_02156	0.15	+0.2
2,312,263	-		CCNA_02156	0.16	+0.9
2,312,285	+		CCNA_02156	0.17	-1.5
2,312,307	+		CCNA_02156	0.19	-0.6
2,312,334	-		CCNA_02156	0.21	+1.5
2,312,360	-		CCNA_02156	0.23	+1.8
2,312,360	-		CCNA_02156	0.23	+1.3
2,312,372	-		CCNA_02156	0.24	+2.8
2,312,373	-		CCNA_02156	0.24	-1.0
2,312,418	+		CCNA_02156	0.27	+0.0
2,312,425	-		CCNA_02156	0.27	+2.0
2,312,426	-		CCNA_02156	0.27	+3.2
2,312,640	-		CCNA_02156	0.43	+1.9
2,312,645	-		CCNA_02156	0.43	+2.0
2,312,692	+		CCNA_02156	0.46	+0.5
2,312,728	-		CCNA_02156	0.49	+1.8
2,312,849	+		CCNA_02156	0.57	+1.0
2,312,849	+		CCNA_02156	0.57	-0.3
2,312,857	-		CCNA_02156	0.58	+2.4
2,312,857	-		CCNA_02156	0.58	+2.3
2,312,857	-		CCNA_02156	0.58	+1.6
2,312,857	-		CCNA_02156	0.58	+2.6
2,312,859	+		CCNA_02156	0.58	-0.3
2,312,859	+		CCNA_02156	0.58	-1.1
2,312,859	+		CCNA_02156	0.58	-0.1
2,312,867	-		CCNA_02156	0.59	+1.2
2,312,867	-		CCNA_02156	0.59	+1.6
2,312,867	-		CCNA_02156	0.59	+1.6
2,312,867	-		CCNA_02156	0.59	+2.7
2,312,867	-		CCNA_02156	0.59	+1.9
2,312,867	-		CCNA_02156	0.59	+1.6
2,312,867	-		CCNA_02156	0.59	+1.5
2,312,927	-		CCNA_02156	0.63	+1.7
2,312,927	-		CCNA_02156	0.63	+1.7
2,312,927	-		CCNA_02156	0.63	+1.6
2,312,960	-		CCNA_02156	0.65	+2.8
2,312,967	-		CCNA_02156	0.66	+2.2