Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31135 and AZOBR_RS31140 are separated by 63 nucleotides AZOBR_RS31140 and AZOBR_RS31145 are separated by 4 nucleotides AZOBR_RS31145 and AZOBR_RS31150 are separated by 199 nucleotides
AZOBR_RS31135: AZOBR_RS31135 - pyruvate phosphate dikinase, at 349,184 to 351,877
_RS31135
AZOBR_RS31140: AZOBR_RS31140 - beta-lactamase, at 351,941 to 353,023
_RS31140
AZOBR_RS31145: AZOBR_RS31145 - chemotaxis protein, at 353,028 to 353,600
_RS31145
AZOBR_RS31150: AZOBR_RS31150 - putative Cold-shock DNA-binding protein (fragment), at 353,800 to 354,255
_RS31150
Position (kb) 351
352
353
354 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 351.266 kb on + strand, within AZOBR_RS31135 at 351.450 kb on - strand, within AZOBR_RS31135 at 351.530 kb on + strand, within AZOBR_RS31135 at 351.789 kb on - strand at 352.320 kb on - strand, within AZOBR_RS31140 at 352.425 kb on - strand, within AZOBR_RS31140 at 352.425 kb on - strand, within AZOBR_RS31140 at 352.425 kb on - strand, within AZOBR_RS31140 at 352.439 kb on + strand, within AZOBR_RS31140 at 352.637 kb on + strand, within AZOBR_RS31140 at 352.637 kb on + strand, within AZOBR_RS31140 at 352.637 kb on + strand, within AZOBR_RS31140 at 352.638 kb on - strand, within AZOBR_RS31140 at 352.856 kb on + strand, within AZOBR_RS31140 at 352.901 kb on + strand, within AZOBR_RS31140 at 353.089 kb on + strand, within AZOBR_RS31145 at 353.089 kb on + strand, within AZOBR_RS31145 at 353.090 kb on - strand, within AZOBR_RS31145 at 353.090 kb on - strand, within AZOBR_RS31145 at 353.239 kb on + strand, within AZOBR_RS31145 at 353.239 kb on + strand, within AZOBR_RS31145 at 353.240 kb on - strand, within AZOBR_RS31145 at 353.240 kb on - strand, within AZOBR_RS31145 at 353.575 kb on + strand at 353.575 kb on + strand at 353.576 kb on - strand at 353.576 kb on - strand at 353.576 kb on - strand at 353.576 kb on - strand at 353.600 kb on - strand at 353.600 kb on - strand at 353.729 kb on + strand at 353.753 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 351,266 + AZOBR_RS31135 0.77 -3.0 351,450 - AZOBR_RS31135 0.84 -0.6 351,530 + AZOBR_RS31135 0.87 -1.4 351,789 - -1.6 352,320 - AZOBR_RS31140 0.35 -2.1 352,425 - AZOBR_RS31140 0.45 +1.7 352,425 - AZOBR_RS31140 0.45 -0.2 352,425 - AZOBR_RS31140 0.45 -0.3 352,439 + AZOBR_RS31140 0.46 +0.4 352,637 + AZOBR_RS31140 0.64 +0.0 352,637 + AZOBR_RS31140 0.64 -0.3 352,637 + AZOBR_RS31140 0.64 +0.9 352,638 - AZOBR_RS31140 0.64 +0.7 352,856 + AZOBR_RS31140 0.84 -2.5 352,901 + AZOBR_RS31140 0.89 -0.9 353,089 + AZOBR_RS31145 0.11 -1.3 353,089 + AZOBR_RS31145 0.11 +0.3 353,090 - AZOBR_RS31145 0.11 -0.6 353,090 - AZOBR_RS31145 0.11 +3.3 353,239 + AZOBR_RS31145 0.37 +0.4 353,239 + AZOBR_RS31145 0.37 -3.0 353,240 - AZOBR_RS31145 0.37 -0.3 353,240 - AZOBR_RS31145 0.37 +0.8 353,575 + +1.6 353,575 + -1.3 353,576 - -0.3 353,576 - +1.5 353,576 - -2.1 353,576 - -0.8 353,600 - +1.0 353,600 - +1.4 353,729 + -1.3 353,753 - +0.1
Or see this region's nucleotide sequence