Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23365 and AZOBR_RS23370 are separated by 529 nucleotides AZOBR_RS23370 and AZOBR_RS23375 are separated by 531 nucleotides
AZOBR_RS23365: AZOBR_RS23365 - iron-hydroxamate transporter ATP-binding protein, at 271,302 to 272,090
_RS23365
AZOBR_RS23370: AZOBR_RS23370 - tRNA-Trp, at 272,620 to 272,695
_RS23370
AZOBR_RS23375: AZOBR_RS23375 - hypothetical protein, at 273,227 to 273,922
_RS23375
Position (kb) 272
273 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 272.026 kb on - strand at 272.026 kb on - strand at 272.026 kb on - strand at 272.026 kb on - strand at 272.026 kb on - strand at 272.026 kb on - strand at 272.363 kb on - strand at 272.394 kb on - strand at 272.394 kb on - strand at 272.394 kb on - strand at 272.748 kb on + strand at 272.807 kb on - strand at 272.821 kb on - strand at 272.916 kb on + strand at 272.942 kb on - strand at 272.978 kb on - strand at 273.016 kb on - strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.083 kb on - strand at 273.303 kb on - strand, within AZOBR_RS23375 at 273.303 kb on - strand, within AZOBR_RS23375 at 273.323 kb on + strand, within AZOBR_RS23375 at 273.323 kb on + strand, within AZOBR_RS23375 at 273.324 kb on - strand, within AZOBR_RS23375 at 273.411 kb on - strand, within AZOBR_RS23375 at 273.689 kb on + strand, within AZOBR_RS23375
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 272,026 - -0.0 272,026 - -0.7 272,026 - -0.1 272,026 - -2.1 272,026 - +0.7 272,026 - -0.6 272,363 - -0.9 272,394 - -0.3 272,394 - -0.1 272,394 - +1.1 272,748 + -1.9 272,807 - +2.2 272,821 - -1.1 272,916 + -0.0 272,942 - +0.5 272,978 - -2.6 273,016 - -1.4 273,082 + -0.1 273,082 + -2.8 273,082 + -0.0 273,083 - -2.1 273,303 - AZOBR_RS23375 0.11 -2.2 273,303 - AZOBR_RS23375 0.11 -2.1 273,323 + AZOBR_RS23375 0.14 +1.3 273,323 + AZOBR_RS23375 0.14 -3.5 273,324 - AZOBR_RS23375 0.14 -2.5 273,411 - AZOBR_RS23375 0.26 -3.4 273,689 + AZOBR_RS23375 0.66 +0.2
Or see this region's nucleotide sequence