Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21440 and AZOBR_RS21445 are separated by 164 nucleotides AZOBR_RS21445 and AZOBR_RS21450 are separated by 67 nucleotides AZOBR_RS21450 and AZOBR_RS21455 are separated by 199 nucleotides AZOBR_RS21455 and AZOBR_RS21460 are separated by 484 nucleotides AZOBR_RS21460 and AZOBR_RS21465 are separated by 102 nucleotides
AZOBR_RS21440: AZOBR_RS21440 - hypothetical protein, at 1,589,232 to 1,590,893
_RS21440
AZOBR_RS21445: AZOBR_RS21445 - hypothetical protein, at 1,591,058 to 1,591,216
_RS21445
AZOBR_RS21450: AZOBR_RS21450 - hypothetical protein, at 1,591,284 to 1,591,520
_RS21450
AZOBR_RS21455: AZOBR_RS21455 - hypothetical protein, at 1,591,720 to 1,592,196
_RS21455
AZOBR_RS21460: AZOBR_RS21460 - hypothetical protein, at 1,592,681 to 1,593,031
_RS21460
AZOBR_RS21465: AZOBR_RS21465 - hemerythrin, at 1,593,134 to 1,593,556
_RS21465
Position (kb)
1591
1592
1593 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1591.531 kb on + strand at 1591.532 kb on - strand at 1591.613 kb on + strand at 1591.614 kb on - strand at 1591.646 kb on - strand at 1591.700 kb on + strand at 1591.804 kb on + strand, within AZOBR_RS21455 at 1591.919 kb on + strand, within AZOBR_RS21455 at 1591.920 kb on - strand, within AZOBR_RS21455 at 1592.124 kb on + strand, within AZOBR_RS21455 at 1592.125 kb on - strand, within AZOBR_RS21455 at 1592.125 kb on - strand, within AZOBR_RS21455 at 1592.141 kb on - strand, within AZOBR_RS21455 at 1592.141 kb on - strand, within AZOBR_RS21455 at 1592.194 kb on + strand at 1592.195 kb on - strand at 1592.810 kb on + strand, within AZOBR_RS21460 at 1592.810 kb on + strand, within AZOBR_RS21460 at 1592.811 kb on - strand, within AZOBR_RS21460 at 1592.811 kb on - strand, within AZOBR_RS21460 at 1592.980 kb on + strand, within AZOBR_RS21460 at 1592.981 kb on - strand, within AZOBR_RS21460 at 1592.981 kb on - strand, within AZOBR_RS21460 at 1593.050 kb on + strand at 1593.051 kb on - strand at 1593.180 kb on + strand, within AZOBR_RS21465 at 1593.180 kb on + strand, within AZOBR_RS21465
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 1,591,531 + -1.1 1,591,532 - -0.0 1,591,613 + -1.7 1,591,614 - +0.3 1,591,646 - +0.8 1,591,700 + -0.1 1,591,804 + AZOBR_RS21455 0.18 +0.4 1,591,919 + AZOBR_RS21455 0.42 +3.2 1,591,920 - AZOBR_RS21455 0.42 +1.8 1,592,124 + AZOBR_RS21455 0.85 -0.9 1,592,125 - AZOBR_RS21455 0.85 +0.3 1,592,125 - AZOBR_RS21455 0.85 +0.3 1,592,141 - AZOBR_RS21455 0.88 -2.1 1,592,141 - AZOBR_RS21455 0.88 +1.2 1,592,194 + +0.3 1,592,195 - +0.6 1,592,810 + AZOBR_RS21460 0.37 -2.3 1,592,810 + AZOBR_RS21460 0.37 +0.1 1,592,811 - AZOBR_RS21460 0.37 +0.6 1,592,811 - AZOBR_RS21460 0.37 +1.1 1,592,980 + AZOBR_RS21460 0.85 -0.8 1,592,981 - AZOBR_RS21460 0.85 +1.2 1,592,981 - AZOBR_RS21460 0.85 -0.4 1,593,050 + -0.1 1,593,051 - -0.1 1,593,180 + AZOBR_RS21465 0.11 -0.9 1,593,180 + AZOBR_RS21465 0.11 +0.7
Or see this region's nucleotide sequence