Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09870 and AZOBR_RS09875 are separated by 11 nucleotides AZOBR_RS09875 and AZOBR_RS09880 overlap by 29 nucleotides AZOBR_RS09880 and AZOBR_RS09885 are separated by 201 nucleotides AZOBR_RS09885 and AZOBR_RS09890 are separated by 24 nucleotides
AZOBR_RS09870: AZOBR_RS09870 - chalcone synthase, at 2,068,444 to 2,069,493
_RS09870
AZOBR_RS09875: AZOBR_RS09875 - membrane protein, at 2,069,505 to 2,070,044
_RS09875
AZOBR_RS09880: AZOBR_RS09880 - hypothetical protein, at 2,070,016 to 2,070,390
_RS09880
AZOBR_RS09885: AZOBR_RS09885 - Crp/Fnr family transcriptional regulator, at 2,070,592 to 2,071,299
_RS09885
AZOBR_RS09890: AZOBR_RS09890 - hypothetical protein, at 2,071,324 to 2,071,737
_RS09890
Position (kb)
2070
2071 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2069.492 kb on - strand at 2069.644 kb on - strand, within AZOBR_RS09875 at 2069.871 kb on + strand, within AZOBR_RS09875 at 2069.871 kb on + strand, within AZOBR_RS09875 at 2069.871 kb on + strand, within AZOBR_RS09875 at 2069.871 kb on + strand, within AZOBR_RS09875 at 2069.871 kb on + strand, within AZOBR_RS09875 at 2069.871 kb on + strand, within AZOBR_RS09875 at 2069.872 kb on - strand, within AZOBR_RS09875 at 2069.872 kb on - strand, within AZOBR_RS09875 at 2070.216 kb on - strand, within AZOBR_RS09880 at 2070.245 kb on + strand, within AZOBR_RS09880 at 2070.245 kb on + strand, within AZOBR_RS09880 at 2070.245 kb on + strand, within AZOBR_RS09880 at 2070.245 kb on + strand, within AZOBR_RS09880 at 2070.246 kb on - strand, within AZOBR_RS09880 at 2070.246 kb on - strand, within AZOBR_RS09880 at 2070.246 kb on - strand, within AZOBR_RS09880 at 2070.381 kb on - strand at 2070.542 kb on + strand at 2071.322 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 2,069,492 - +2.1 2,069,644 - AZOBR_RS09875 0.26 -1.4 2,069,871 + AZOBR_RS09875 0.68 +1.1 2,069,871 + AZOBR_RS09875 0.68 -1.4 2,069,871 + AZOBR_RS09875 0.68 +0.5 2,069,871 + AZOBR_RS09875 0.68 +1.8 2,069,871 + AZOBR_RS09875 0.68 -2.1 2,069,871 + AZOBR_RS09875 0.68 +0.7 2,069,872 - AZOBR_RS09875 0.68 +0.6 2,069,872 - AZOBR_RS09875 0.68 +1.6 2,070,216 - AZOBR_RS09880 0.53 +0.7 2,070,245 + AZOBR_RS09880 0.61 -2.2 2,070,245 + AZOBR_RS09880 0.61 -1.6 2,070,245 + AZOBR_RS09880 0.61 -1.2 2,070,245 + AZOBR_RS09880 0.61 +1.8 2,070,246 - AZOBR_RS09880 0.61 -0.4 2,070,246 - AZOBR_RS09880 0.61 +0.9 2,070,246 - AZOBR_RS09880 0.61 -2.6 2,070,381 - +0.5 2,070,542 + -0.2 2,071,322 + -1.1
Or see this region's nucleotide sequence