Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24165 and AO353_24170 are separated by 6 nucleotides AO353_24170 and AO353_24175 are separated by 446 nucleotides AO353_24175 and AO353_24180 are separated by 103 nucleotides AO353_24180 and AO353_24185 are separated by 173 nucleotides
AO353_24165: AO353_24165 - hypothetical protein, at 5,318,022 to 5,318,435
_24165
AO353_24170: AO353_24170 - hypothetical protein, at 5,318,442 to 5,318,651
_24170
AO353_24175: AO353_24175 - hypothetical protein, at 5,319,098 to 5,319,319
_24175
AO353_24180: AO353_24180 - transcriptional regulator, at 5,319,423 to 5,319,878
_24180
AO353_24185: AO353_24185 - serine/threonine protein phosphatase, at 5,320,052 to 5,320,783
_24185
Position (kb) 5319
5320 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5318.456 kb on + strand at 5318.456 kb on + strand at 5318.456 kb on + strand at 5318.456 kb on + strand at 5318.457 kb on - strand at 5318.457 kb on - strand at 5318.457 kb on - strand at 5318.457 kb on - strand at 5318.544 kb on + strand, within AO353_24170 at 5318.544 kb on + strand, within AO353_24170 at 5318.545 kb on - strand, within AO353_24170 at 5318.545 kb on - strand, within AO353_24170 at 5318.545 kb on - strand, within AO353_24170 at 5318.580 kb on + strand, within AO353_24170 at 5318.580 kb on + strand, within AO353_24170 at 5318.580 kb on + strand, within AO353_24170 at 5318.580 kb on + strand, within AO353_24170 at 5318.581 kb on - strand, within AO353_24170 at 5318.581 kb on - strand, within AO353_24170 at 5318.581 kb on - strand, within AO353_24170 at 5318.615 kb on + strand, within AO353_24170 at 5318.615 kb on + strand, within AO353_24170 at 5318.616 kb on - strand, within AO353_24170 at 5318.619 kb on - strand, within AO353_24170 at 5318.619 kb on - strand, within AO353_24170 at 5318.619 kb on - strand, within AO353_24170 at 5318.619 kb on - strand, within AO353_24170 at 5318.619 kb on - strand, within AO353_24170 at 5318.663 kb on + strand at 5318.663 kb on + strand at 5318.663 kb on + strand at 5318.663 kb on + strand at 5318.663 kb on + strand at 5318.664 kb on - strand at 5318.706 kb on - strand at 5318.884 kb on + strand at 5318.884 kb on + strand at 5318.885 kb on - strand at 5318.885 kb on - strand at 5318.970 kb on + strand at 5319.019 kb on - strand at 5319.019 kb on - strand at 5319.019 kb on - strand at 5319.110 kb on - strand at 5319.110 kb on - strand at 5319.148 kb on + strand, within AO353_24175 at 5319.149 kb on - strand, within AO353_24175 at 5319.194 kb on - strand, within AO353_24175 at 5319.236 kb on + strand, within AO353_24175 at 5319.236 kb on + strand, within AO353_24175 at 5319.236 kb on + strand, within AO353_24175 at 5319.236 kb on + strand, within AO353_24175 at 5319.237 kb on - strand, within AO353_24175 at 5319.237 kb on - strand, within AO353_24175 at 5319.277 kb on - strand, within AO353_24175 at 5319.290 kb on + strand, within AO353_24175 at 5319.291 kb on - strand, within AO353_24175 at 5319.306 kb on + strand at 5319.352 kb on + strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.362 kb on + strand at 5319.366 kb on + strand at 5319.366 kb on + strand at 5319.366 kb on + strand at 5319.367 kb on - strand at 5319.367 kb on - strand at 5319.367 kb on - strand at 5319.396 kb on + strand at 5319.396 kb on + strand at 5319.396 kb on + strand at 5319.397 kb on - strand at 5319.397 kb on - strand at 5319.397 kb on - strand at 5319.507 kb on + strand, within AO353_24180 at 5319.508 kb on - strand, within AO353_24180 at 5319.508 kb on - strand, within AO353_24180 at 5319.508 kb on - strand, within AO353_24180 at 5319.552 kb on - strand, within AO353_24180 at 5319.777 kb on + strand, within AO353_24180 at 5319.777 kb on + strand, within AO353_24180 at 5319.777 kb on + strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.905 kb on + strand at 5319.905 kb on + strand at 5319.905 kb on + strand at 5319.906 kb on - strand at 5319.906 kb on - strand at 5319.906 kb on - strand at 5319.906 kb on - strand at 5320.008 kb on + strand at 5320.008 kb on + strand at 5320.008 kb on + strand at 5320.009 kb on - strand at 5320.025 kb on + strand at 5320.026 kb on - strand at 5320.031 kb on + strand at 5320.032 kb on - strand at 5320.047 kb on + strand at 5320.047 kb on + strand at 5320.048 kb on - strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.118 kb on + strand at 5320.119 kb on - strand at 5320.119 kb on - strand at 5320.119 kb on - strand at 5320.119 kb on - strand at 5320.125 kb on + strand at 5320.125 kb on + strand at 5320.125 kb on + strand at 5320.126 kb on - strand, within AO353_24185 at 5320.126 kb on - strand, within AO353_24185 at 5320.126 kb on - strand, within AO353_24185 at 5320.144 kb on + strand, within AO353_24185 at 5320.145 kb on - strand, within AO353_24185 at 5320.185 kb on + strand, within AO353_24185 at 5320.186 kb on - strand, within AO353_24185 at 5320.186 kb on - strand, within AO353_24185 at 5320.186 kb on - strand, within AO353_24185 at 5320.205 kb on + strand, within AO353_24185 at 5320.205 kb on + strand, within AO353_24185 at 5320.205 kb on + strand, within AO353_24185 at 5320.206 kb on - strand, within AO353_24185 at 5320.229 kb on + strand, within AO353_24185 at 5320.230 kb on - strand, within AO353_24185 at 5320.230 kb on - strand, within AO353_24185 at 5320.296 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.446 kb on - strand, within AO353_24185 at 5320.669 kb on + strand, within AO353_24185 at 5320.669 kb on + strand, within AO353_24185 at 5320.670 kb on - strand, within AO353_24185 at 5320.781 kb on + strand at 5320.781 kb on + strand at 5320.781 kb on + strand at 5320.781 kb on + strand at 5320.782 kb on - strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.840 kb on + strand at 5320.840 kb on + strand at 5320.840 kb on + strand at 5320.866 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 5,318,456 + -0.2 5,318,456 + +0.5 5,318,456 + -0.2 5,318,456 + +0.2 5,318,457 - +0.8 5,318,457 - -0.1 5,318,457 - +1.2 5,318,457 - -2.2 5,318,544 + AO353_24170 0.49 -0.8 5,318,544 + AO353_24170 0.49 -1.8 5,318,545 - AO353_24170 0.49 +0.6 5,318,545 - AO353_24170 0.49 -0.3 5,318,545 - AO353_24170 0.49 -0.1 5,318,580 + AO353_24170 0.66 +0.4 5,318,580 + AO353_24170 0.66 +0.4 5,318,580 + AO353_24170 0.66 +1.9 5,318,580 + AO353_24170 0.66 -1.1 5,318,581 - AO353_24170 0.66 -0.5 5,318,581 - AO353_24170 0.66 +0.1 5,318,581 - AO353_24170 0.66 -0.2 5,318,615 + AO353_24170 0.82 -0.2 5,318,615 + AO353_24170 0.82 -0.6 5,318,616 - AO353_24170 0.83 -0.4 5,318,619 - AO353_24170 0.84 +1.2 5,318,619 - AO353_24170 0.84 +1.6 5,318,619 - AO353_24170 0.84 +1.6 5,318,619 - AO353_24170 0.84 +0.2 5,318,619 - AO353_24170 0.84 -1.3 5,318,663 + -0.4 5,318,663 + -0.4 5,318,663 + -1.3 5,318,663 + +1.2 5,318,663 + -0.4 5,318,664 - -0.4 5,318,706 - -0.4 5,318,884 + +0.9 5,318,884 + -0.1 5,318,885 - +1.2 5,318,885 - +1.4 5,318,970 + -0.0 5,319,019 - +0.4 5,319,019 - -0.1 5,319,019 - +1.6 5,319,110 - +2.6 5,319,110 - +0.4 5,319,148 + AO353_24175 0.23 -0.1 5,319,149 - AO353_24175 0.23 +0.3 5,319,194 - AO353_24175 0.43 +1.3 5,319,236 + AO353_24175 0.62 -0.8 5,319,236 + AO353_24175 0.62 -0.6 5,319,236 + AO353_24175 0.62 -0.3 5,319,236 + AO353_24175 0.62 +0.1 5,319,237 - AO353_24175 0.63 -0.2 5,319,237 - AO353_24175 0.63 +0.1 5,319,277 - AO353_24175 0.81 -0.8 5,319,290 + AO353_24175 0.86 -1.4 5,319,291 - AO353_24175 0.87 -3.1 5,319,306 + +2.8 5,319,352 + -0.2 5,319,353 - +0.1 5,319,353 - +0.6 5,319,353 - +0.5 5,319,353 - -0.1 5,319,353 - -0.7 5,319,353 - +1.0 5,319,353 - -0.4 5,319,362 + -0.2 5,319,366 + -0.7 5,319,366 + -0.5 5,319,366 + -0.8 5,319,367 - -0.6 5,319,367 - -1.4 5,319,367 - +0.4 5,319,396 + -0.0 5,319,396 + -1.0 5,319,396 + -0.0 5,319,397 - +0.7 5,319,397 - +1.0 5,319,397 - -0.4 5,319,507 + AO353_24180 0.18 -1.1 5,319,508 - AO353_24180 0.19 -1.4 5,319,508 - AO353_24180 0.19 -0.4 5,319,508 - AO353_24180 0.19 +0.6 5,319,552 - AO353_24180 0.28 -0.6 5,319,777 + AO353_24180 0.78 -0.1 5,319,777 + AO353_24180 0.78 -1.0 5,319,777 + AO353_24180 0.78 -1.4 5,319,778 - AO353_24180 0.78 -0.2 5,319,778 - AO353_24180 0.78 -1.1 5,319,778 - AO353_24180 0.78 -0.3 5,319,778 - AO353_24180 0.78 +2.4 5,319,778 - AO353_24180 0.78 -1.0 5,319,778 - AO353_24180 0.78 -0.0 5,319,778 - AO353_24180 0.78 -0.4 5,319,778 - AO353_24180 0.78 -0.1 5,319,778 - AO353_24180 0.78 -1.8 5,319,905 + +0.7 5,319,905 + +0.3 5,319,905 + +0.2 5,319,906 - +0.2 5,319,906 - +0.7 5,319,906 - -0.8 5,319,906 - -0.1 5,320,008 + -1.1 5,320,008 + +0.8 5,320,008 + +0.2 5,320,009 - +1.4 5,320,025 + +0.5 5,320,026 - +0.2 5,320,031 + +1.9 5,320,032 - +2.2 5,320,047 + +1.2 5,320,047 + +1.2 5,320,048 - +0.0 5,320,061 + -1.6 5,320,061 + -0.2 5,320,061 + +1.8 5,320,061 + +1.8 5,320,061 + +0.1 5,320,061 + -1.0 5,320,061 + -0.0 5,320,118 + +0.2 5,320,119 - -0.3 5,320,119 - +0.7 5,320,119 - +0.7 5,320,119 - +0.5 5,320,125 + -0.7 5,320,125 + +1.2 5,320,125 + -0.6 5,320,126 - AO353_24185 0.10 -0.1 5,320,126 - AO353_24185 0.10 +0.9 5,320,126 - AO353_24185 0.10 -1.3 5,320,144 + AO353_24185 0.13 -1.8 5,320,145 - AO353_24185 0.13 +0.9 5,320,185 + AO353_24185 0.18 +1.1 5,320,186 - AO353_24185 0.18 +1.0 5,320,186 - AO353_24185 0.18 +0.1 5,320,186 - AO353_24185 0.18 +0.7 5,320,205 + AO353_24185 0.21 -0.2 5,320,205 + AO353_24185 0.21 -1.1 5,320,205 + AO353_24185 0.21 -0.0 5,320,206 - AO353_24185 0.21 -0.7 5,320,229 + AO353_24185 0.24 +0.6 5,320,230 - AO353_24185 0.24 -0.4 5,320,230 - AO353_24185 0.24 -1.1 5,320,296 + AO353_24185 0.33 -0.4 5,320,360 + AO353_24185 0.42 -1.2 5,320,360 + AO353_24185 0.42 +0.1 5,320,360 + AO353_24185 0.42 +1.2 5,320,360 + AO353_24185 0.42 +0.5 5,320,446 - AO353_24185 0.54 +0.9 5,320,669 + AO353_24185 0.84 -0.1 5,320,669 + AO353_24185 0.84 +1.2 5,320,670 - AO353_24185 0.84 -0.3 5,320,781 + +0.4 5,320,781 + -0.5 5,320,781 + +0.8 5,320,781 + -0.5 5,320,782 - +0.6 5,320,785 + -0.4 5,320,785 + -0.2 5,320,785 + -0.1 5,320,785 + -1.1 5,320,785 + -0.4 5,320,785 + +0.2 5,320,785 + -1.9 5,320,785 + -0.1 5,320,786 - -0.1 5,320,786 - -1.7 5,320,786 - -2.0 5,320,786 - -1.1 5,320,786 - -0.6 5,320,786 - -1.1 5,320,786 - -0.8 5,320,786 - +0.5 5,320,840 + +0.2 5,320,840 + -1.0 5,320,840 + -1.4 5,320,866 + -0.6 5,320,878 + +1.5 5,320,878 + +0.5 5,320,878 + -0.5 5,320,878 + -0.6 5,320,878 + +0.6 5,320,878 + -0.5
Or see this region's nucleotide sequence