Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22020 and AO353_22025 are separated by 75 nucleotides AO353_22025 and AO353_22030 are separated by 154 nucleotides AO353_22030 and AO353_22035 are separated by 88 nucleotides AO353_22035 and AO353_22040 are separated by 100 nucleotides
AO353_22020: AO353_22020 - hypothetical protein, at 4,823,037 to 4,823,474
_22020
AO353_22025: AO353_22025 - iron-sulfur cluster repair di-iron protein, at 4,823,550 to 4,824,224
_22025
AO353_22030: AO353_22030 - transcriptional regulator, at 4,824,379 to 4,825,908
_22030
AO353_22035: AO353_22035 - pyridoxine 5'-phosphate oxidase, at 4,825,997 to 4,826,644
_22035
AO353_22040: AO353_22040 - molybdenum cofactor biosynthesis protein B, at 4,826,745 to 4,827,299
_22040
Position (kb)
4824
4825
4826 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4823.460 kb on + strand at 4823.460 kb on + strand at 4823.461 kb on - strand at 4823.492 kb on + strand at 4823.493 kb on - strand at 4823.685 kb on + strand, within AO353_22025 at 4823.685 kb on + strand, within AO353_22025 at 4823.685 kb on + strand at 4823.686 kb on - strand, within AO353_22025 at 4824.150 kb on - strand, within AO353_22025 at 4824.150 kb on - strand, within AO353_22025 at 4824.150 kb on - strand, within AO353_22025 at 4824.235 kb on + strand at 4824.236 kb on - strand at 4824.236 kb on - strand at 4824.236 kb on - strand at 4824.282 kb on + strand at 4824.315 kb on + strand at 4824.327 kb on + strand at 4824.327 kb on + strand at 4824.328 kb on - strand at 4824.361 kb on + strand at 4824.361 kb on + strand at 4824.361 kb on + strand at 4824.361 kb on + strand at 4824.362 kb on - strand at 4824.362 kb on - strand at 4824.362 kb on - strand at 4824.362 kb on - strand at 4824.368 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.373 kb on - strand at 4824.373 kb on - strand at 4824.375 kb on + strand at 4824.375 kb on + strand at 4824.375 kb on + strand at 4824.376 kb on - strand at 4824.466 kb on + strand at 4824.466 kb on + strand at 4824.467 kb on - strand at 4824.491 kb on + strand at 4824.491 kb on + strand at 4824.491 kb on + strand at 4824.492 kb on - strand at 4824.492 kb on - strand at 4824.655 kb on + strand, within AO353_22030 at 4824.655 kb on + strand, within AO353_22030 at 4824.724 kb on + strand, within AO353_22030 at 4824.724 kb on + strand, within AO353_22030 at 4824.724 kb on + strand, within AO353_22030 at 4824.725 kb on - strand, within AO353_22030 at 4824.725 kb on - strand, within AO353_22030 at 4824.725 kb on - strand, within AO353_22030 at 4824.725 kb on - strand, within AO353_22030 at 4824.725 kb on - strand, within AO353_22030 at 4824.725 kb on - strand, within AO353_22030 at 4824.980 kb on + strand, within AO353_22030 at 4824.980 kb on + strand, within AO353_22030 at 4824.981 kb on - strand, within AO353_22030 at 4824.981 kb on - strand, within AO353_22030 at 4824.981 kb on - strand, within AO353_22030 at 4825.091 kb on + strand, within AO353_22030 at 4825.405 kb on + strand, within AO353_22030 at 4825.423 kb on + strand, within AO353_22030 at 4825.564 kb on + strand, within AO353_22030 at 4825.564 kb on + strand, within AO353_22030 at 4825.565 kb on - strand, within AO353_22030 at 4825.565 kb on - strand, within AO353_22030 at 4825.565 kb on - strand, within AO353_22030 at 4825.566 kb on + strand, within AO353_22030 at 4825.566 kb on + strand, within AO353_22030 at 4825.566 kb on + strand, within AO353_22030 at 4825.566 kb on + strand, within AO353_22030 at 4825.567 kb on - strand, within AO353_22030 at 4825.567 kb on - strand, within AO353_22030 at 4825.567 kb on - strand, within AO353_22030 at 4825.567 kb on - strand, within AO353_22030 at 4825.692 kb on + strand, within AO353_22030 at 4825.902 kb on + strand at 4825.902 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.907 kb on - strand at 4825.907 kb on - strand at 4825.907 kb on - strand at 4825.907 kb on - strand at 4825.907 kb on - strand at 4825.907 kb on - strand at 4826.027 kb on - strand at 4826.030 kb on + strand at 4826.030 kb on + strand at 4826.030 kb on + strand at 4826.030 kb on + strand at 4826.031 kb on - strand at 4826.031 kb on - strand at 4826.031 kb on - strand at 4826.031 kb on - strand at 4826.031 kb on - strand at 4826.031 kb on - strand at 4826.047 kb on - strand at 4826.140 kb on + strand, within AO353_22035 at 4826.141 kb on - strand, within AO353_22035 at 4826.141 kb on - strand, within AO353_22035 at 4826.225 kb on - strand, within AO353_22035 at 4826.240 kb on + strand, within AO353_22035 at 4826.326 kb on + strand, within AO353_22035 at 4826.326 kb on + strand, within AO353_22035 at 4826.326 kb on + strand, within AO353_22035 at 4826.326 kb on + strand, within AO353_22035 at 4826.326 kb on + strand, within AO353_22035 at 4826.372 kb on + strand, within AO353_22035 at 4826.372 kb on + strand, within AO353_22035 at 4826.373 kb on - strand, within AO353_22035 at 4826.650 kb on + strand at 4826.650 kb on + strand at 4826.650 kb on + strand at 4826.650 kb on + strand at 4826.651 kb on - strand at 4826.667 kb on + strand at 4826.683 kb on + strand at 4826.683 kb on + strand at 4826.683 kb on + strand at 4826.683 kb on + strand at 4826.683 kb on + strand at 4826.684 kb on - strand at 4826.684 kb on - strand at 4826.728 kb on + strand at 4826.728 kb on + strand at 4826.728 kb on + strand at 4826.807 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.907 kb on - strand, within AO353_22040 at 4826.907 kb on - strand, within AO353_22040 at 4826.907 kb on - strand, within AO353_22040 at 4826.907 kb on - strand, within AO353_22040
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 4,823,460 + -1.4 4,823,460 + -0.1 4,823,461 - -0.6 4,823,492 + +0.7 4,823,493 - +1.1 4,823,685 + AO353_22025 0.20 -0.8 4,823,685 + AO353_22025 0.20 +2.4 4,823,685 + +1.0 4,823,686 - AO353_22025 0.20 +0.0 4,824,150 - AO353_22025 0.89 +0.8 4,824,150 - AO353_22025 0.89 -0.6 4,824,150 - AO353_22025 0.89 +0.7 4,824,235 + -0.5 4,824,236 - -0.2 4,824,236 - +0.2 4,824,236 - -0.4 4,824,282 + +1.6 4,824,315 + -0.0 4,824,327 + -0.5 4,824,327 + +0.4 4,824,328 - +1.6 4,824,361 + +0.1 4,824,361 + -0.6 4,824,361 + +0.8 4,824,361 + +0.2 4,824,362 - -0.5 4,824,362 - -1.6 4,824,362 - -0.2 4,824,362 - +0.5 4,824,368 + -1.4 4,824,372 + -0.4 4,824,372 + +1.0 4,824,372 + +1.1 4,824,372 + -1.1 4,824,372 + -0.4 4,824,372 + -1.6 4,824,372 + +1.0 4,824,373 - -0.3 4,824,373 - +1.1 4,824,375 + +0.4 4,824,375 + -0.7 4,824,375 + +0.2 4,824,376 - +0.4 4,824,466 + -0.6 4,824,466 + +0.2 4,824,467 - -1.8 4,824,491 + +0.5 4,824,491 + -0.2 4,824,491 + -0.4 4,824,492 - -0.6 4,824,492 - +0.1 4,824,655 + AO353_22030 0.18 +0.8 4,824,655 + AO353_22030 0.18 +0.6 4,824,724 + AO353_22030 0.23 +0.5 4,824,724 + AO353_22030 0.23 +0.9 4,824,724 + AO353_22030 0.23 -0.2 4,824,725 - AO353_22030 0.23 -1.2 4,824,725 - AO353_22030 0.23 +1.0 4,824,725 - AO353_22030 0.23 -0.3 4,824,725 - AO353_22030 0.23 +0.7 4,824,725 - AO353_22030 0.23 -1.0 4,824,725 - AO353_22030 0.23 +0.3 4,824,980 + AO353_22030 0.39 -0.9 4,824,980 + AO353_22030 0.39 -1.2 4,824,981 - AO353_22030 0.39 -0.1 4,824,981 - AO353_22030 0.39 +0.7 4,824,981 - AO353_22030 0.39 -0.2 4,825,091 + AO353_22030 0.47 -0.0 4,825,405 + AO353_22030 0.67 -0.1 4,825,423 + AO353_22030 0.68 +1.0 4,825,564 + AO353_22030 0.77 +2.2 4,825,564 + AO353_22030 0.77 -0.4 4,825,565 - AO353_22030 0.78 +0.3 4,825,565 - AO353_22030 0.78 +0.6 4,825,565 - AO353_22030 0.78 +1.6 4,825,566 + AO353_22030 0.78 +1.1 4,825,566 + AO353_22030 0.78 -0.3 4,825,566 + AO353_22030 0.78 -0.0 4,825,566 + AO353_22030 0.78 -0.8 4,825,567 - AO353_22030 0.78 -0.5 4,825,567 - AO353_22030 0.78 +0.8 4,825,567 - AO353_22030 0.78 +0.0 4,825,567 - AO353_22030 0.78 -1.6 4,825,692 + AO353_22030 0.86 +1.1 4,825,902 + +1.2 4,825,902 + +0.6 4,825,906 + -1.0 4,825,906 + +0.5 4,825,906 + +1.8 4,825,906 + -1.2 4,825,906 + -2.6 4,825,906 + +0.7 4,825,906 + -0.1 4,825,906 + +1.2 4,825,907 - -0.1 4,825,907 - -1.2 4,825,907 - +0.9 4,825,907 - -1.2 4,825,907 - +0.5 4,825,907 - -0.4 4,826,027 - -1.4 4,826,030 + +0.4 4,826,030 + -0.1 4,826,030 + +0.2 4,826,030 + +0.0 4,826,031 - -1.0 4,826,031 - +0.9 4,826,031 - +0.4 4,826,031 - -3.2 4,826,031 - -0.6 4,826,031 - -0.4 4,826,047 - -0.5 4,826,140 + AO353_22035 0.22 +0.0 4,826,141 - AO353_22035 0.22 -0.8 4,826,141 - AO353_22035 0.22 -1.2 4,826,225 - AO353_22035 0.35 -0.6 4,826,240 + AO353_22035 0.38 +0.6 4,826,326 + AO353_22035 0.51 +1.2 4,826,326 + AO353_22035 0.51 +0.3 4,826,326 + AO353_22035 0.51 -1.1 4,826,326 + AO353_22035 0.51 -0.4 4,826,326 + AO353_22035 0.51 -0.4 4,826,372 + AO353_22035 0.58 +0.7 4,826,372 + AO353_22035 0.58 +0.3 4,826,373 - AO353_22035 0.58 +0.2 4,826,650 + +1.0 4,826,650 + -0.2 4,826,650 + +0.7 4,826,650 + +0.6 4,826,651 - +0.4 4,826,667 + +1.0 4,826,683 + -0.6 4,826,683 + +0.7 4,826,683 + -0.3 4,826,683 + +1.0 4,826,683 + -0.5 4,826,684 - +0.2 4,826,684 - -0.6 4,826,728 + -0.4 4,826,728 + +1.4 4,826,728 + -1.0 4,826,807 + AO353_22040 0.11 +1.0 4,826,906 + AO353_22040 0.29 +0.2 4,826,906 + AO353_22040 0.29 +0.6 4,826,906 + AO353_22040 0.29 -2.6 4,826,906 + AO353_22040 0.29 -0.8 4,826,906 + AO353_22040 0.29 +1.4 4,826,906 + AO353_22040 0.29 +2.0 4,826,906 + AO353_22040 0.29 +0.0 4,826,906 + AO353_22040 0.29 +0.8 4,826,906 + AO353_22040 0.29 -2.0 4,826,907 - AO353_22040 0.29 -0.6 4,826,907 - AO353_22040 0.29 -0.4 4,826,907 - AO353_22040 0.29 +1.4 4,826,907 - AO353_22040 0.29 -0.0
Or see this region's nucleotide sequence